RNA–Protein interactions for RNA: ENST00000613928.1

CCL3-205, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 5

Gene CCL3, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-205ENST00000613928 MT1FP04733 61 aa3.74□□□□□ -1.81
CCL3-205ENST00000613928 SPINT4Q6UDR6 99 aa3.74□□□□□ -1.81
CCL3-205ENST00000613928 KTN1-AS1Q86SY8 53 aa3.72□□□□□ -1.81
CCL3-205ENST00000613928 MACF1Q9UPN3 7388 aaKnown RBP3.7□□□□□ -1.82
CCL3-205ENST00000613928 KRTAP10-10P60014 251 aa3.69□□□□□ -1.82
CCL3-205ENST00000613928 SPRR2GQ9BYE4 73 aa3.69□□□□□ -1.82
CCL3-205ENST00000613928 ROMO1P60602 79 aa3.66□□□□□ -1.82
CCL3-205ENST00000613928 KRTAP19-8Q3LI54 63 aa3.6□□□□□ -1.83
CCL3-205ENST00000613928 C10orf95Q9H7T3 257 aa3.6□□□□□ -1.83
CCL3-205ENST00000613928 KRTAP6-3Q3LI67 103 aa3.59□□□□□ -1.83
CCL3-205ENST00000613928 MT1BP07438 61 aa3.56□□□□□ -1.84
CCL3-205ENST00000613928 KRTAP19-6Q3LI70 58 aa3.56□□□□□ -1.84
CCL3-205ENST00000613928 PLAC4Q8WY50 150 aa3.55□□□□□ -1.84
CCL3-205ENST00000613928 KRTAP5-9P26371 169 aa3.53□□□□□ -1.84
CCL3-205ENST00000613928 KRTAP25-1Q3LHN0 102 aa3.53□□□□□ -1.84
CCL3-205ENST00000613928 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
CCL3-205ENST00000613928 NEBP20929 6669 aa3.53□□□□□ -1.84
CCL3-205ENST00000613928 KRTAP20-1Q3LI63 56 aa3.5□□□□□ -1.85
CCL3-205ENST00000613928 KRTAP5-4Q6L8H1 288 aa3.49□□□□□ -1.85
CCL3-205ENST00000613928 MT1XP80297 61 aa3.45□□□□□ -1.86
CCL3-205ENST00000613928 LCE3AQ5TA76 89 aa3.44□□□□□ -1.86
CCL3-205ENST00000613928 MUC12Q9UKN1 5478 aa3.43□□□□□ -1.86
CCL3-205ENST00000613928 TNP1P09430 55 aa3.42□□□□□ -1.86
CCL3-205ENST00000613928 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
CCL3-205ENST00000613928 PP632Q6XCG6 107 aa3.33□□□□□ -1.88
CCL3-205ENST00000613928 PRO2289Q9P1D8 64 aa3.33□□□□□ -1.88
CCL3-205ENST00000613928 SPRR5A0A1B0GTR4 108 aa3.32□□□□□ -1.88
CCL3-205ENST00000613928 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
CCL3-205ENST00000613928 MDN1Q9NU22 5596 aa3.29□□□□□ -1.88
CCL3-205ENST00000613928 KRTAP2-3P0C7H8 128 aa3.29□□□□□ -1.88
CCL3-205ENST00000613928 KRTAP2-4Q9BYR9 128 aa3.29□□□□□ -1.88
CCL3-205ENST00000613928 KMT2DO14686 5537 aa3.28□□□□□ -1.88
CCL3-205ENST00000613928 KRTAP8-1Q8IUC2 63 aa3.23□□□□□ -1.89
CCL3-205ENST00000613928 SPRR2EP22531 72 aa3.19□□□□□ -1.9
CCL3-205ENST00000613928 SPRR2BP35325 72 aa3.19□□□□□ -1.9
CCL3-205ENST00000613928 SPRR2AP35326 72 aa3.19□□□□□ -1.9
CCL3-205ENST00000613928 SPRR2FQ96RM1 72 aa3.17□□□□□ -1.9
CCL3-205ENST00000613928 KRTAP2-1Q9BYU5 128 aa3.17□□□□□ -1.9
CCL3-205ENST00000613928 KRTAP5-5Q701N2 237 aaPredicted RBP3.15□□□□□ -1.91
CCL3-205ENST00000613928 KRTAP12-3P60328 96 aa3.14□□□□□ -1.91
CCL3-205ENST00000613928 KRTAP19-5Q3LI72 72 aa3.13□□□□□ -1.91
CCL3-205ENST00000613928 SPRR2DP22532 72 aa3.09□□□□□ -1.91
CCL3-205ENST00000613928 KRTAP19-7Q3SYF9 63 aa3.08□□□□□ -1.92
CCL3-205ENST00000613928 OBSCNQ5VST9 7968 aa3.08□□□□□ -1.92
CCL3-205ENST00000613928 GPR98Q8WXG9 6306 aa3.07□□□□□ -1.92
CCL3-205ENST00000613928 LUZP6Q538Z0 58 aa3.03□□□□□ -1.92
CCL3-205ENST00000613928 MT1EP04732 61 aa3.02□□□□□ -1.93
CCL3-205ENST00000613928 KRTAP4-3Q9BYR4 195 aa3.02□□□□□ -1.93
CCL3-205ENST00000613928 KRTAP5-2Q701N4 177 aa2.97□□□□□ -1.93
CCL3-205ENST00000613928 MT1LQ93083 61 aa2.97□□□□□ -1.93
CCL3-205ENST00000613928 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
CCL3-205ENST00000613928 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
CCL3-205ENST00000613928 DSTQ03001 7570 aaKnown RBP2.88□□□□□ -1.95
CCL3-205ENST00000613928 KRTAP19-3Q7Z4W3 81 aa2.87□□□□□ -1.95
CCL3-205ENST00000613928 MT1GP13640 62 aa2.85□□□□□ -1.95
CCL3-205ENST00000613928 MT1MQ8N339 61 aa2.84□□□□□ -1.95
CCL3-205ENST00000613928 HMCN1Q96RW7 5635 aa2.75□□□□□ -1.97
CCL3-205ENST00000613928 MT4P47944 62 aa2.74□□□□□ -1.97
CCL3-205ENST00000613928 KRTAP5-10Q6L8G5 202 aa2.74□□□□□ -1.97
CCL3-205ENST00000613928 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
CCL3-205ENST00000613928 KRTAP5-7Q6L8G8 165 aa2.66□□□□□ -1.98
CCL3-205ENST00000613928 KRTAP5-8O75690 187 aa2.55□□□□□ -2
CCL3-205ENST00000613928 MT1AP04731 61 aa2.52□□□□□ -2.01
CCL3-205ENST00000613928 KRTAP6-1Q3LI64 71 aa2.5□□□□□ -2.01
CCL3-205ENST00000613928 KRTAP12-4P60329 112 aa2.48□□□□□ -2.01
CCL3-205ENST00000613928 SYNE1Q8NF91 8797 aaKnown RBP2.47□□□□□ -2.01
CCL3-205ENST00000613928 KRTAP20-2Q3LI61 65 aa2.46□□□□□ -2.02
CCL3-205ENST00000613928 INE1O15225 51 aa2.38□□□□□ -2.03
CCL3-205ENST00000613928 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.03
CCL3-205ENST00000613928 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
CCL3-205ENST00000613928 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
CCL3-205ENST00000613928 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
CCL3-205ENST00000613928 KRTAP6-2Q3LI66 62 aa2.28□□□□□ -2.04
CCL3-205ENST00000613928 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
CCL3-205ENST00000613928 PRM1P04553 51 aa1.93□□□□□ -2.1
CCL3-205ENST00000613928 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
CCL3-205ENST00000613928 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
CCL3-205ENST00000613928 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 48.6 ms