RNA–Protein interactions for RNA: ENST00000613548.1

PCDH8-203, Transcript of protocadherin 8, humanhuman

TSL 2

Gene PCDH8, Length 744 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-203ENST00000613548 KRTAP2-4Q9BYR9 128 aa5.6□□□□□ -1.51
PCDH8-203ENST00000613548 CDC42SE1Q9NRR8 79 aa5.59□□□□□ -1.51
PCDH8-203ENST00000613548 LCE5AQ5TCM9 118 aa5.58□□□□□ -1.52
PCDH8-203ENST00000613548 BRK1Q8WUW1 75 aa5.56□□□□□ -1.52
PCDH8-203ENST00000613548 MT1LQ93083 61 aa5.5□□□□□ -1.53
PCDH8-203ENST00000613548 LCE3BQ5TA77 95 aa5.48□□□□□ -1.53
PCDH8-203ENST00000613548 MT1GP13640 62 aa5.46□□□□□ -1.54
PCDH8-203ENST00000613548 KRTAP12-3P60328 96 aa5.46□□□□□ -1.54
PCDH8-203ENST00000613548 KRTAP2-2Q9BYT5 123 aa5.44□□□□□ -1.54
PCDH8-203ENST00000613548 KRTAP2-1Q9BYU5 128 aa5.44□□□□□ -1.54
PCDH8-203ENST00000613548 MT1MQ8N339 61 aa5.42□□□□□ -1.54
PCDH8-203ENST00000613548 ROMO1P60602 79 aa5.41□□□□□ -1.54
PCDH8-203ENST00000613548 PP632Q6XCG6 107 aa5.41□□□□□ -1.54
PCDH8-203ENST00000613548 KRTAP23-1A1A580 65 aa5.4□□□□□ -1.54
PCDH8-203ENST00000613548 DSTQ03001 7570 aaKnown RBP5.37□□□□□ -1.55
PCDH8-203ENST00000613548 PMAIP1Q13794 54 aa5.26□□□□□ -1.57
PCDH8-203ENST00000613548 KRTAP4-3Q9BYR4 195 aa5.25□□□□□ -1.57
PCDH8-203ENST00000613548 KRTAP4-7Q9BYR0 210 aa5.21□□□□□ -1.58
PCDH8-203ENST00000613548 KTN1-AS1Q86SY8 53 aa5.19□□□□□ -1.58
PCDH8-203ENST00000613548 KRTAP15-1Q3LI76 137 aa5.18□□□□□ -1.58
PCDH8-203ENST00000613548 KRTAP19-4Q3LI73 84 aa5.14□□□□□ -1.59
PCDH8-203ENST00000613548 LCE3CQ5T5A8 94 aa5.04□□□□□ -1.6
PCDH8-203ENST00000613548 LCE4AQ5TA78 99 aa5.03□□□□□ -1.6
PCDH8-203ENST00000613548 KRTAP5-4Q6L8H1 288 aa5.02□□□□□ -1.61
PCDH8-203ENST00000613548 KRTAP4-9Q9BYQ8 210 aa5□□□□□ -1.61
PCDH8-203ENST00000613548 KRTAP5-5Q701N2 237 aaPredicted RBP4.97□□□□□ -1.61
PCDH8-203ENST00000613548 LCE1DQ5T752 114 aa4.96□□□□□ -1.62
PCDH8-203ENST00000613548 HMCN1Q96RW7 5635 aa4.93□□□□□ -1.62
PCDH8-203ENST00000613548 LOC100996750A0A140TA64 210 aa4.93□□□□□ -1.62
PCDH8-203ENST00000613548 MT4P47944 62 aa4.91□□□□□ -1.62
PCDH8-203ENST00000613548 PRAC1Q96KF2 57 aa4.89□□□□□ -1.63
PCDH8-203ENST00000613548 KRTAP4-6Q9BYQ5 205 aa4.81□□□□□ -1.64
PCDH8-203ENST00000613548 KRTAP9-6A8MVA2 160 aa4.8□□□□□ -1.64
PCDH8-203ENST00000613548 SYNE1Q8NF91 8797 aaKnown RBP4.76□□□□□ -1.65
PCDH8-203ENST00000613548 GPR98Q8WXG9 6306 aa4.73□□□□□ -1.65
PCDH8-203ENST00000613548 KRTAP20-2Q3LI61 65 aa4.71□□□□□ -1.66
PCDH8-203ENST00000613548 SPRR5A0A1B0GTR4 108 aa4.7□□□□□ -1.66
PCDH8-203ENST00000613548 AHNAK2Q8IVF2 5795 aa4.7□□□□□ -1.66
PCDH8-203ENST00000613548 MT1AP04731 61 aa4.69□□□□□ -1.66
PCDH8-203ENST00000613548 KRTAP12-4P60329 112 aa4.68□□□□□ -1.66
PCDH8-203ENST00000613548 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
PCDH8-203ENST00000613548 KRTAP5-3Q6L8H2 238 aa4.57□□□□□ -1.68
PCDH8-203ENST00000613548 KRTAP5-10Q6L8G5 202 aa4.49□□□□□ -1.69
PCDH8-203ENST00000613548 KRTAP5-2Q701N4 177 aa4.47□□□□□ -1.69
PCDH8-203ENST00000613548 KRTAP9-4Q9BYQ2 154 aa4.45□□□□□ -1.7
PCDH8-203ENST00000613548 KRTAP6-2Q3LI66 62 aa4.36□□□□□ -1.71
PCDH8-203ENST00000613548 KRTAP5-7Q6L8G8 165 aa4.27□□□□□ -1.73
PCDH8-203ENST00000613548 MT3P25713 68 aa4.23□□□□□ -1.73
PCDH8-203ENST00000613548 KRTAP4-11Q9BYQ6 195 aa4.2□□□□□ -1.74
PCDH8-203ENST00000613548 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
PCDH8-203ENST00000613548 KRTAP5-8O75690 187 aa4.08□□□□□ -1.76
PCDH8-203ENST00000613548 NDUFAF8A1L188 74 aa4.03□□□□□ -1.76
PCDH8-203ENST00000613548 H3BS24 57 aa3.97□□□□□ -1.77
PCDH8-203ENST00000613548 LUZP6Q538Z0 58 aa3.96□□□□□ -1.78
PCDH8-203ENST00000613548 KRTAP5-1Q6L8H4 278 aa3.93□□□□□ -1.78
PCDH8-203ENST00000613548 KRTAP4-12Q9BQ66 201 aa3.89□□□□□ -1.79
PCDH8-203ENST00000613548 KRTAP9-9Q9BYP9 154 aa3.87□□□□□ -1.79
PCDH8-203ENST00000613548 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
PCDH8-203ENST00000613548 LCE1EQ5T753 118 aa3.84□□□□□ -1.79
PCDH8-203ENST00000613548 MUC5BQ9HC84 5762 aaPredicted RBP3.78□□□□□ -1.81
PCDH8-203ENST00000613548 AHNAKQ09666 5890 aaKnown RBP3.75□□□□□ -1.81
PCDH8-203ENST00000613548 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
PCDH8-203ENST00000613548 A0A0A0MQY5 61 aa3.65□□□□□ -1.83
PCDH8-203ENST00000613548 KRTAP4-2Q9BYR5 136 aa3.64□□□□□ -1.83
PCDH8-203ENST00000613548 LCE1CQ5T751 118 aa3.57□□□□□ -1.84
PCDH8-203ENST00000613548 LCE1BQ5T7P3 118 aa3.57□□□□□ -1.84
PCDH8-203ENST00000613548 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
PCDH8-203ENST00000613548 INE1O15225 51 aa3.41□□□□□ -1.86
PCDH8-203ENST00000613548 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
PCDH8-203ENST00000613548 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
PCDH8-203ENST00000613548 KRTAP21-2Q3LI59 83 aa3.06□□□□□ -1.92
PCDH8-203ENST00000613548 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
PCDH8-203ENST00000613548 PRM1P04553 51 aa2.8□□□□□ -1.96
PCDH8-203ENST00000613548 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
PCDH8-203ENST00000613548 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
PCDH8-203ENST00000613548 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
PCDH8-203ENST00000613548 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
PCDH8-203ENST00000613548 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 41.3 ms