RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, humanhuman

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-222ENST00000613508 A0A1B0GU33 70 aa3.96□□□□□ -1.78
CBWD1-222ENST00000613508 SPINT4Q6UDR6 99 aa3.95□□□□□ -1.78
CBWD1-222ENST00000613508 MT1LQ93083 61 aa3.95□□□□□ -1.78
CBWD1-222ENST00000613508 MT4P47944 62 aa3.92□□□□□ -1.78
CBWD1-222ENST00000613508 KRTAP5-4Q6L8H1 288 aa3.92□□□□□ -1.78
CBWD1-222ENST00000613508 SMIM26A0A096LP01 95 aa3.85□□□□□ -1.79
CBWD1-222ENST00000613508 LCE3AQ5TA76 89 aa3.85□□□□□ -1.79
CBWD1-222ENST00000613508 KRTAP4-3Q9BYR4 195 aa3.85□□□□□ -1.79
CBWD1-222ENST00000613508 C10orf95Q9H7T3 257 aa3.85□□□□□ -1.79
CBWD1-222ENST00000613508 KRTAP5-10Q6L8G5 202 aa3.84□□□□□ -1.79
CBWD1-222ENST00000613508 H7BZZ5 65 aa3.82□□□□□ -1.8
CBWD1-222ENST00000613508 TNP1P09430 55 aa3.82□□□□□ -1.8
CBWD1-222ENST00000613508 COX7CP15954 63 aa3.82□□□□□ -1.8
CBWD1-222ENST00000613508 ANAPC13Q9BS18 74 aa3.81□□□□□ -1.8
CBWD1-222ENST00000613508 A0A1B0GU69 56 aa3.79□□□□□ -1.8
CBWD1-222ENST00000613508 A8MU10 97 aa3.79□□□□□ -1.8
CBWD1-222ENST00000613508 PCP4P48539 62 aa3.78□□□□□ -1.8
CBWD1-222ENST00000613508 CCDC179H3BU77 68 aa3.74□□□□□ -1.81
CBWD1-222ENST00000613508 KRTAP5-7Q6L8G8 165 aa3.73□□□□□ -1.81
CBWD1-222ENST00000613508 KRTAP12-3P60328 96 aa3.72□□□□□ -1.81
CBWD1-222ENST00000613508 KRTAP5-5Q701N2 237 aaPredicted RBP3.69□□□□□ -1.82
CBWD1-222ENST00000613508 SPRR5A0A1B0GTR4 108 aa3.68□□□□□ -1.82
CBWD1-222ENST00000613508 KRTAP20-2Q3LI61 65 aa3.68□□□□□ -1.82
CBWD1-222ENST00000613508 PRR15LQ9BU68 103 aa3.64□□□□□ -1.83
CBWD1-222ENST00000613508 KRTAP12-4P60329 112 aa3.61□□□□□ -1.83
CBWD1-222ENST00000613508 A0A0A0MQY5 61 aa3.58□□□□□ -1.84
CBWD1-222ENST00000613508 TMEM258P61165 79 aa3.58□□□□□ -1.84
CBWD1-222ENST00000613508 LINC01558Q9Y6Z2 57 aa3.58□□□□□ -1.84
CBWD1-222ENST00000613508 SYNE1Q8NF91 8797 aaKnown RBP3.58□□□□□ -1.84
CBWD1-222ENST00000613508 ATP5EP56381 51 aaPredicted RBP3.57□□□□□ -1.84
CBWD1-222ENST00000613508 KRTAP25-1Q3LHN0 102 aa3.54□□□□□ -1.84
CBWD1-222ENST00000613508 UQCR11O14957 56 aa3.52□□□□□ -1.85
CBWD1-222ENST00000613508 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
CBWD1-222ENST00000613508 MIR22HGQ0VDD5 57 aa3.41□□□□□ -1.86
CBWD1-222ENST00000613508 LCE3CQ5T5A8 94 aa3.41□□□□□ -1.86
CBWD1-222ENST00000613508 K7ERS5 55 aa3.38□□□□□ -1.87
CBWD1-222ENST00000613508 RPS28P62857 69 aaKnown RBP3.38□□□□□ -1.87
CBWD1-222ENST00000613508 AHNAKQ09666 5890 aaKnown RBP3.37□□□□□ -1.87
CBWD1-222ENST00000613508 MT1AP04731 61 aa3.36□□□□□ -1.87
CBWD1-222ENST00000613508 Q1T7F1 81 aa3.34□□□□□ -1.87
CBWD1-222ENST00000613508 KRTAP6-1Q3LI64 71 aa3.34□□□□□ -1.87
CBWD1-222ENST00000613508 V9GYY9 64 aa3.33□□□□□ -1.88
CBWD1-222ENST00000613508 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
CBWD1-222ENST00000613508 PSPHP1O15172 72 aa3.31□□□□□ -1.88
CBWD1-222ENST00000613508 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
CBWD1-222ENST00000613508 MUC5BQ9HC84 5762 aaPredicted RBP3.28□□□□□ -1.88
CBWD1-222ENST00000613508 MT3P25713 68 aa3.24□□□□□ -1.89
CBWD1-222ENST00000613508 KRTAP9-6A8MVA2 160 aa3.23□□□□□ -1.89
CBWD1-222ENST00000613508 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
CBWD1-222ENST00000613508 KRTAP6-2Q3LI66 62 aa3.22□□□□□ -1.89
CBWD1-222ENST00000613508 A6NED7 52 aa3.2□□□□□ -1.9
CBWD1-222ENST00000613508 CDC42SE1Q9NRR8 79 aa3.18□□□□□ -1.9
CBWD1-222ENST00000613508 ROMO1P60602 79 aa3.13□□□□□ -1.91
CBWD1-222ENST00000613508 LCE1EQ5T753 118 aa3.07□□□□□ -1.92
CBWD1-222ENST00000613508 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
CBWD1-222ENST00000613508 KRTAP5-11Q6L8G4 156 aa3.06□□□□□ -1.92
CBWD1-222ENST00000613508 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
CBWD1-222ENST00000613508 BRK1Q8WUW1 75 aa3.02□□□□□ -1.93
CBWD1-222ENST00000613508 PRAC1Q96KF2 57 aa2.93□□□□□ -1.94
CBWD1-222ENST00000613508 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
CBWD1-222ENST00000613508 PMAIP1Q13794 54 aa2.86□□□□□ -1.95
CBWD1-222ENST00000613508 PRO0628Q9UI54 55 aa2.84□□□□□ -1.95
CBWD1-222ENST00000613508 NDUFAF8A1L188 74 aa2.79□□□□□ -1.96
CBWD1-222ENST00000613508 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
CBWD1-222ENST00000613508 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
CBWD1-222ENST00000613508 KTN1-AS1Q86SY8 53 aa2.65□□□□□ -1.99
CBWD1-222ENST00000613508 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
CBWD1-222ENST00000613508 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
CBWD1-222ENST00000613508 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
CBWD1-222ENST00000613508 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
CBWD1-222ENST00000613508 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
CBWD1-222ENST00000613508 LUZP6Q538Z0 58 aa2.21□□□□□ -2.06
CBWD1-222ENST00000613508 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
CBWD1-222ENST00000613508 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
CBWD1-222ENST00000613508 INE1O15225 51 aa1.65□□□□□ -2.15
CBWD1-222ENST00000613508 PRM1P04553 51 aa1.57□□□□□ -2.16
CBWD1-222ENST00000613508 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 8.5 ms