RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 LCE5AQ5TCM9 118 aa5.57□□□□□ -1.52
CTSA-216ENST00000607212 KRTAP19-3Q7Z4W3 81 aa5.56□□□□□ -1.52
CTSA-216ENST00000607212 MT1EP04732 61 aa5.54□□□□□ -1.52
CTSA-216ENST00000607212 KRTAP19-7Q3SYF9 63 aa5.54□□□□□ -1.52
CTSA-216ENST00000607212 A0A0D9SG42 100 aa5.48□□□□□ -1.53
CTSA-216ENST00000607212 K7ERS5 55 aa5.48□□□□□ -1.53
CTSA-216ENST00000607212 LCE1DQ5T752 114 aa5.45□□□□□ -1.54
CTSA-216ENST00000607212 SPINT4Q6UDR6 99 aa5.43□□□□□ -1.54
CTSA-216ENST00000607212 MT4P47944 62 aa5.42□□□□□ -1.54
CTSA-216ENST00000607212 PP632Q6XCG6 107 aa5.42□□□□□ -1.54
CTSA-216ENST00000607212 KRTAP19-5Q3LI72 72 aa5.4□□□□□ -1.54
CTSA-216ENST00000607212 MT1GP13640 62 aa5.39□□□□□ -1.55
CTSA-216ENST00000607212 KRTAP12-1P59990 96 aa5.38□□□□□ -1.55
CTSA-216ENST00000607212 ROMO1P60602 79 aa5.38□□□□□ -1.55
CTSA-216ENST00000607212 LCE4AQ5TA78 99 aa5.36□□□□□ -1.55
CTSA-216ENST00000607212 KRTAP25-1Q3LHN0 102 aa5.35□□□□□ -1.55
CTSA-216ENST00000607212 MT1MQ8N339 61 aa5.31□□□□□ -1.56
CTSA-216ENST00000607212 HMCN1Q96RW7 5635 aa5.3□□□□□ -1.56
CTSA-216ENST00000607212 MT1LQ93083 61 aa5.25□□□□□ -1.57
CTSA-216ENST00000607212 AHNAK2Q8IVF2 5795 aa5.24□□□□□ -1.57
CTSA-216ENST00000607212 KRTAP4-3Q9BYR4 195 aa5.2□□□□□ -1.58
CTSA-216ENST00000607212 C10orf95Q9H7T3 257 aa5.18□□□□□ -1.58
CTSA-216ENST00000607212 KRTAP4-6Q9BYQ5 205 aa5.16□□□□□ -1.58
CTSA-216ENST00000607212 LCE3AQ5TA76 89 aa5.15□□□□□ -1.59
CTSA-216ENST00000607212 TNP1P09430 55 aa5.14□□□□□ -1.59
CTSA-216ENST00000607212 KRTAP5-10Q6L8G5 202 aa5.14□□□□□ -1.59
CTSA-216ENST00000607212 KRTAP5-4Q6L8H1 288 aa5.14□□□□□ -1.59
CTSA-216ENST00000607212 KRTAP4-7Q9BYR0 210 aa5.01□□□□□ -1.61
CTSA-216ENST00000607212 KRTAP5-7Q6L8G8 165 aa4.99□□□□□ -1.61
CTSA-216ENST00000607212 KRTAP5-3Q6L8H2 238 aa4.99□□□□□ -1.61
CTSA-216ENST00000607212 KRTAP12-3P60328 96 aa4.96□□□□□ -1.62
CTSA-216ENST00000607212 KRTAP20-2Q3LI61 65 aa4.93□□□□□ -1.62
CTSA-216ENST00000607212 SPRR5A0A1B0GTR4 108 aa4.9□□□□□ -1.63
CTSA-216ENST00000607212 KRTAP12-4P60329 112 aa4.87□□□□□ -1.63
CTSA-216ENST00000607212 KRTAP15-1Q3LI76 137 aa4.86□□□□□ -1.63
CTSA-216ENST00000607212 KRTAP5-5Q701N2 237 aaPredicted RBP4.81□□□□□ -1.64
CTSA-216ENST00000607212 KRTAP23-1A1A580 65 aa4.77□□□□□ -1.65
CTSA-216ENST00000607212 LOC100996750A0A140TA64 210 aa4.76□□□□□ -1.65
CTSA-216ENST00000607212 SYNE1Q8NF91 8797 aaKnown RBP4.72□□□□□ -1.65
CTSA-216ENST00000607212 NDUFAF8A1L188 74 aa4.58□□□□□ -1.68
CTSA-216ENST00000607212 KRTAP19-4Q3LI73 84 aa4.58□□□□□ -1.68
CTSA-216ENST00000607212 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
CTSA-216ENST00000607212 H3BS24 57 aa4.56□□□□□ -1.68
CTSA-216ENST00000607212 LCE3CQ5T5A8 94 aa4.52□□□□□ -1.69
CTSA-216ENST00000607212 MT1AP04731 61 aa4.47□□□□□ -1.69
CTSA-216ENST00000607212 KRTAP6-1Q3LI64 71 aa4.46□□□□□ -1.7
CTSA-216ENST00000607212 KRTAP5-2Q701N4 177 aa4.45□□□□□ -1.7
CTSA-216ENST00000607212 KRTAP5-8O75690 187 aa4.4□□□□□ -1.71
CTSA-216ENST00000607212 LUZP6Q538Z0 58 aa4.38□□□□□ -1.71
CTSA-216ENST00000607212 AHNAKQ09666 5890 aaKnown RBP4.37□□□□□ -1.71
CTSA-216ENST00000607212 KRTAP9-4Q9BYQ2 154 aa4.34□□□□□ -1.71
CTSA-216ENST00000607212 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
CTSA-216ENST00000607212 MUC5BQ9HC84 5762 aaPredicted RBP4.33□□□□□ -1.72
CTSA-216ENST00000607212 MUC5ACP98088 5654 aa4.31□□□□□ -1.72
CTSA-216ENST00000607212 KRTAP9-9Q9BYP9 154 aa4.3□□□□□ -1.72
CTSA-216ENST00000607212 OBSCNQ5VST9 7968 aa4.21□□□□□ -1.73
CTSA-216ENST00000607212 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
CTSA-216ENST00000607212 MT3P25713 68 aa4.13□□□□□ -1.75
CTSA-216ENST00000607212 KRTAP5-1Q6L8H4 278 aa4.05□□□□□ -1.76
CTSA-216ENST00000607212 A0A0A0MQY5 61 aa4.04□□□□□ -1.76
CTSA-216ENST00000607212 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
CTSA-216ENST00000607212 INE1O15225 51 aa3.76□□□□□ -1.81
CTSA-216ENST00000607212 LCE1BQ5T7P3 118 aa3.72□□□□□ -1.81
CTSA-216ENST00000607212 KRTAP4-2Q9BYR5 136 aa3.6□□□□□ -1.83
CTSA-216ENST00000607212 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
CTSA-216ENST00000607212 KRTAP4-12Q9BQ66 201 aa3.45□□□□□ -1.86
CTSA-216ENST00000607212 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
CTSA-216ENST00000607212 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
CTSA-216ENST00000607212 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
CTSA-216ENST00000607212 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
CTSA-216ENST00000607212 PHGR1C9JFL3 82 aa3.08□□□□□ -1.92
CTSA-216ENST00000607212 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
CTSA-216ENST00000607212 KRTAP21-2Q3LI59 83 aa2.9□□□□□ -1.95
CTSA-216ENST00000607212 PRM1P04553 51 aa2.85□□□□□ -1.95
CTSA-216ENST00000607212 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
CTSA-216ENST00000607212 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
CTSA-216ENST00000607212 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
CTSA-216ENST00000607212 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 87 ms