RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 SPRR2AP35326 72 aa3.94□□□□□ -1.78
CTSA-215ENST00000607187 A0A1B0GU33 70 aa3.9□□□□□ -1.79
CTSA-215ENST00000607187 SPATA8Q6RVD6 105 aa3.9□□□□□ -1.79
CTSA-215ENST00000607187 A0A0D9SG42 100 aa3.89□□□□□ -1.79
CTSA-215ENST00000607187 CCDC179H3BU77 68 aa3.88□□□□□ -1.79
CTSA-215ENST00000607187 KRTAP2-3P0C7H8 128 aa3.88□□□□□ -1.79
CTSA-215ENST00000607187 SPINT4Q6UDR6 99 aa3.88□□□□□ -1.79
CTSA-215ENST00000607187 KRTAP2-4Q9BYR9 128 aa3.88□□□□□ -1.79
CTSA-215ENST00000607187 A0A1B0GU69 56 aa3.85□□□□□ -1.79
CTSA-215ENST00000607187 ATP5EP56381 51 aaPredicted RBP3.83□□□□□ -1.8
CTSA-215ENST00000607187 KRTAP12-1P59990 96 aa3.83□□□□□ -1.8
CTSA-215ENST00000607187 SPRR2DP22532 72 aa3.81□□□□□ -1.8
CTSA-215ENST00000607187 KRTAP25-1Q3LHN0 102 aa3.79□□□□□ -1.8
CTSA-215ENST00000607187 KRTAP5-3Q6L8H2 238 aa3.76□□□□□ -1.81
CTSA-215ENST00000607187 KRTAP2-1Q9BYU5 128 aa3.76□□□□□ -1.81
CTSA-215ENST00000607187 KRTAP19-7Q3SYF9 63 aa3.75□□□□□ -1.81
CTSA-215ENST00000607187 TMEM258P61165 79 aa3.74□□□□□ -1.81
CTSA-215ENST00000607187 PRR15LQ9BU68 103 aa3.74□□□□□ -1.81
CTSA-215ENST00000607187 LINC01558Q9Y6Z2 57 aa3.73□□□□□ -1.81
CTSA-215ENST00000607187 MT1EP04732 61 aa3.71□□□□□ -1.82
CTSA-215ENST00000607187 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
CTSA-215ENST00000607187 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
CTSA-215ENST00000607187 KRTAP19-5Q3LI72 72 aa3.66□□□□□ -1.82
CTSA-215ENST00000607187 C10orf95Q9H7T3 257 aa3.66□□□□□ -1.82
CTSA-215ENST00000607187 UQCR11O14957 56 aa3.63□□□□□ -1.83
CTSA-215ENST00000607187 TNP1P09430 55 aa3.63□□□□□ -1.83
CTSA-215ENST00000607187 MT1GP13640 62 aa3.6□□□□□ -1.83
CTSA-215ENST00000607187 LCE3AQ5TA76 89 aa3.6□□□□□ -1.83
CTSA-215ENST00000607187 MIR22HGQ0VDD5 57 aa3.55□□□□□ -1.84
CTSA-215ENST00000607187 PP632Q6XCG6 107 aa3.55□□□□□ -1.84
CTSA-215ENST00000607187 MT1LQ93083 61 aa3.55□□□□□ -1.84
CTSA-215ENST00000607187 DSTQ03001 7570 aaKnown RBP3.54□□□□□ -1.84
CTSA-215ENST00000607187 Q1T7F1 81 aa3.52□□□□□ -1.85
CTSA-215ENST00000607187 MT1MQ8N339 61 aa3.52□□□□□ -1.85
CTSA-215ENST00000607187 SPRR5A0A1B0GTR4 108 aa3.49□□□□□ -1.85
CTSA-215ENST00000607187 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
CTSA-215ENST00000607187 KRTAP12-3P60328 96 aa3.47□□□□□ -1.85
CTSA-215ENST00000607187 KTN1-AS1Q86SY8 53 aa3.47□□□□□ -1.85
CTSA-215ENST00000607187 KRTAP4-3Q9BYR4 195 aa3.43□□□□□ -1.86
CTSA-215ENST00000607187 RPS28P62857 69 aaKnown RBP3.37□□□□□ -1.87
CTSA-215ENST00000607187 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
CTSA-215ENST00000607187 MT4P47944 62 aa3.33□□□□□ -1.88
CTSA-215ENST00000607187 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
CTSA-215ENST00000607187 CDC42SE1Q9NRR8 79 aa3.29□□□□□ -1.88
CTSA-215ENST00000607187 HMCN1Q96RW7 5635 aa3.28□□□□□ -1.88
CTSA-215ENST00000607187 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
CTSA-215ENST00000607187 ROMO1P60602 79 aa3.24□□□□□ -1.89
CTSA-215ENST00000607187 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
CTSA-215ENST00000607187 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
CTSA-215ENST00000607187 KRTAP20-2Q3LI61 65 aa3.14□□□□□ -1.91
CTSA-215ENST00000607187 KRTAP12-4P60329 112 aa3.13□□□□□ -1.91
CTSA-215ENST00000607187 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
CTSA-215ENST00000607187 KRTAP5-10Q6L8G5 202 aa3.12□□□□□ -1.91
CTSA-215ENST00000607187 AHNAK2Q8IVF2 5795 aa3.1□□□□□ -1.91
CTSA-215ENST00000607187 SYNE1Q8NF91 8797 aaKnown RBP3.09□□□□□ -1.91
CTSA-215ENST00000607187 BRK1Q8WUW1 75 aa3.05□□□□□ -1.92
CTSA-215ENST00000607187 MT1AP04731 61 aa3.02□□□□□ -1.93
CTSA-215ENST00000607187 KRTAP6-1Q3LI64 71 aa3.01□□□□□ -1.93
CTSA-215ENST00000607187 KRTAP5-7Q6L8G8 165 aa2.98□□□□□ -1.93
CTSA-215ENST00000607187 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
CTSA-215ENST00000607187 KRTAP6-2Q3LI66 62 aa2.86□□□□□ -1.95
CTSA-215ENST00000607187 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
CTSA-215ENST00000607187 INE1O15225 51 aa2.71□□□□□ -1.98
CTSA-215ENST00000607187 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
CTSA-215ENST00000607187 OBSCNQ5VST9 7968 aa2.69□□□□□ -1.98
CTSA-215ENST00000607187 KRTAP5-1Q6L8H4 278 aa2.63□□□□□ -1.99
CTSA-215ENST00000607187 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
CTSA-215ENST00000607187 MUC5ACP98088 5654 aa2.53□□□□□ -2
CTSA-215ENST00000607187 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
CTSA-215ENST00000607187 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
CTSA-215ENST00000607187 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
CTSA-215ENST00000607187 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
CTSA-215ENST00000607187 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
CTSA-215ENST00000607187 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
CTSA-215ENST00000607187 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
CTSA-215ENST00000607187 PRM1P04553 51 aa1.66□□□□□ -2.14
CTSA-215ENST00000607187 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
CTSA-215ENST00000607187 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 13.3 ms