RNA–Protein interactions for RNA: ENST00000606699.5

NECAB3-220, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,022 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-220ENST00000606699 C10orf95Q9H7T3 257 aa6.85□□□□□ -1.31
NECAB3-220ENST00000606699 LCE4AQ5TA78 99 aa6.82□□□□□ -1.32
NECAB3-220ENST00000606699 HMCN1Q96RW7 5635 aa6.81□□□□□ -1.32
NECAB3-220ENST00000606699 MT1GP13640 62 aa6.77□□□□□ -1.33
NECAB3-220ENST00000606699 MT4P47944 62 aa6.75□□□□□ -1.33
NECAB3-220ENST00000606699 A6NED7 52 aa6.74□□□□□ -1.33
NECAB3-220ENST00000606699 TNP1P09430 55 aa6.74□□□□□ -1.33
NECAB3-220ENST00000606699 PP632Q6XCG6 107 aa6.72□□□□□ -1.33
NECAB3-220ENST00000606699 K7ERS5 55 aa6.7□□□□□ -1.34
NECAB3-220ENST00000606699 KRTAP5-10Q6L8G5 202 aa6.67□□□□□ -1.34
NECAB3-220ENST00000606699 AHNAK2Q8IVF2 5795 aa6.66□□□□□ -1.34
NECAB3-220ENST00000606699 LCE3AQ5TA76 89 aa6.65□□□□□ -1.34
NECAB3-220ENST00000606699 KRTAP19-5Q3LI72 72 aa6.64□□□□□ -1.35
NECAB3-220ENST00000606699 KRTAP5-4Q6L8H1 288 aa6.6□□□□□ -1.35
NECAB3-220ENST00000606699 MT1MQ8N339 61 aa6.6□□□□□ -1.35
NECAB3-220ENST00000606699 MT1LQ93083 61 aa6.52□□□□□ -1.37
NECAB3-220ENST00000606699 KRTAP4-6Q9BYQ5 205 aa6.52□□□□□ -1.37
NECAB3-220ENST00000606699 KRTAP25-1Q3LHN0 102 aa6.5□□□□□ -1.37
NECAB3-220ENST00000606699 KRTAP5-7Q6L8G8 165 aa6.5□□□□□ -1.37
NECAB3-220ENST00000606699 CDC42SE1Q9NRR8 79 aa6.48□□□□□ -1.37
NECAB3-220ENST00000606699 KRTAP4-3Q9BYR4 195 aa6.42□□□□□ -1.38
NECAB3-220ENST00000606699 KRTAP5-3Q6L8H2 238 aa6.4□□□□□ -1.38
NECAB3-220ENST00000606699 KRTAP12-3P60328 96 aa6.37□□□□□ -1.39
NECAB3-220ENST00000606699 ROMO1P60602 79 aa6.32□□□□□ -1.4
NECAB3-220ENST00000606699 KRTAP23-1A1A580 65 aa6.24□□□□□ -1.41
NECAB3-220ENST00000606699 KRTAP20-2Q3LI61 65 aa6.24□□□□□ -1.41
NECAB3-220ENST00000606699 SPRR5A0A1B0GTR4 108 aa6.2□□□□□ -1.42
NECAB3-220ENST00000606699 KRTAP4-7Q9BYR0 210 aa6.14□□□□□ -1.43
NECAB3-220ENST00000606699 BRK1Q8WUW1 75 aa6.13□□□□□ -1.43
NECAB3-220ENST00000606699 KRTAP12-4P60329 112 aa6.11□□□□□ -1.43
NECAB3-220ENST00000606699 KRTAP5-5Q701N2 237 aaPredicted RBP6.11□□□□□ -1.43
NECAB3-220ENST00000606699 KRTAP15-1Q3LI76 137 aa6.04□□□□□ -1.44
NECAB3-220ENST00000606699 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
NECAB3-220ENST00000606699 LCE3CQ5T5A8 94 aa5.89□□□□□ -1.47
NECAB3-220ENST00000606699 SYNE1Q8NF91 8797 aaKnown RBP5.84□□□□□ -1.47
NECAB3-220ENST00000606699 LOC100996750A0A140TA64 210 aa5.84□□□□□ -1.47
NECAB3-220ENST00000606699 KRTAP4-11Q9BYQ6 195 aa5.83□□□□□ -1.48
NECAB3-220ENST00000606699 PMAIP1Q13794 54 aa5.75□□□□□ -1.49
NECAB3-220ENST00000606699 KRTAP5-2Q701N4 177 aa5.69□□□□□ -1.5
NECAB3-220ENST00000606699 SVIPQ8NHG7 77 aa5.65□□□□□ -1.5
NECAB3-220ENST00000606699 KRTAP5-8O75690 187 aa5.63□□□□□ -1.51
NECAB3-220ENST00000606699 MUC5BQ9HC84 5762 aaPredicted RBP5.63□□□□□ -1.51
NECAB3-220ENST00000606699 MUC5ACP98088 5654 aa5.6□□□□□ -1.51
NECAB3-220ENST00000606699 KRTAP9-6A8MVA2 160 aa5.58□□□□□ -1.52
NECAB3-220ENST00000606699 AHNAKQ09666 5890 aaKnown RBP5.58□□□□□ -1.52
NECAB3-220ENST00000606699 PRO0628Q9UI54 55 aa5.56□□□□□ -1.52
NECAB3-220ENST00000606699 MT1AP04731 61 aa5.55□□□□□ -1.52
NECAB3-220ENST00000606699 KRTAP6-1Q3LI64 71 aa5.52□□□□□ -1.53
NECAB3-220ENST00000606699 PRAC1Q96KF2 57 aa5.52□□□□□ -1.53
NECAB3-220ENST00000606699 KRTAP9-9Q9BYP9 154 aa5.45□□□□□ -1.54
NECAB3-220ENST00000606699 KRTAP9-4Q9BYQ2 154 aa5.42□□□□□ -1.54
NECAB3-220ENST00000606699 OBSCNQ5VST9 7968 aa5.4□□□□□ -1.55
NECAB3-220ENST00000606699 KRTAP6-2Q3LI66 62 aa5.37□□□□□ -1.55
NECAB3-220ENST00000606699 KTN1-AS1Q86SY8 53 aa5.27□□□□□ -1.57
NECAB3-220ENST00000606699 KRTAP5-1Q6L8H4 278 aa5.19□□□□□ -1.58
NECAB3-220ENST00000606699 MT3P25713 68 aa5.13□□□□□ -1.59
NECAB3-220ENST00000606699 LCE1EQ5T753 118 aa4.84□□□□□ -1.63
NECAB3-220ENST00000606699 KRTAP4-2Q9BYR5 136 aa4.56□□□□□ -1.68
NECAB3-220ENST00000606699 LUZP6Q538Z0 58 aa4.55□□□□□ -1.68
NECAB3-220ENST00000606699 LCE1BQ5T7P3 118 aa4.52□□□□□ -1.69
NECAB3-220ENST00000606699 LCE1CQ5T751 118 aa4.49□□□□□ -1.69
NECAB3-220ENST00000606699 LCE3DQ9BYE3 92 aa4.3□□□□□ -1.72
NECAB3-220ENST00000606699 KRTAP4-12Q9BQ66 201 aa4.28□□□□□ -1.72
NECAB3-220ENST00000606699 H3BS24 57 aa4.21□□□□□ -1.74
NECAB3-220ENST00000606699 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
NECAB3-220ENST00000606699 KRTAP5-11Q6L8G4 156 aa4.12□□□□□ -1.75
NECAB3-220ENST00000606699 LCE3EQ5T5B0 92 aa4.1□□□□□ -1.75
NECAB3-220ENST00000606699 A0A0A0MQY5 61 aa4.08□□□□□ -1.76
NECAB3-220ENST00000606699 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.02□□□□□ -1.77
NECAB3-220ENST00000606699 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
NECAB3-220ENST00000606699 PHGR1C9JFL3 82 aa3.9□□□□□ -1.79
NECAB3-220ENST00000606699 KRTAP21-2Q3LI59 83 aa3.66□□□□□ -1.82
NECAB3-220ENST00000606699 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
NECAB3-220ENST00000606699 MUC19Q7Z5P9 8384 aa3.31□□□□□ -1.88
NECAB3-220ENST00000606699 PRM1P04553 51 aa3.27□□□□□ -1.89
NECAB3-220ENST00000606699 INE1O15225 51 aa3.18□□□□□ -1.9
NECAB3-220ENST00000606699 KRTAP21-1Q3LI58 79 aa3□□□□□ -1.93
NECAB3-220ENST00000606699 MUC16Q8WXI7 14507 aa2.35□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 205 ms