RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 KRTAP8-1Q8IUC2 63 aa2.98□□□□□ -1.93
MSH6-211ENST00000606499 TNP1P09430 55 aa2.97□□□□□ -1.93
MSH6-211ENST00000606499 KRTAP6-3Q3LI67 103 aa2.97□□□□□ -1.93
MSH6-211ENST00000606499 MDN1Q9NU22 5596 aa2.95□□□□□ -1.94
MSH6-211ENST00000606499 KRTAP5-9P26371 169 aa2.94□□□□□ -1.94
MSH6-211ENST00000606499 MUC12Q9UKN1 5478 aa2.94□□□□□ -1.94
MSH6-211ENST00000606499 SPRR2FQ96RM1 72 aa2.93□□□□□ -1.94
MSH6-211ENST00000606499 ROMO1P60602 79 aa2.92□□□□□ -1.94
MSH6-211ENST00000606499 KRTAP25-1Q3LHN0 102 aa2.92□□□□□ -1.94
MSH6-211ENST00000606499 LCE3AQ5TA76 89 aa2.92□□□□□ -1.94
MSH6-211ENST00000606499 KTN1-AS1Q86SY8 53 aa2.89□□□□□ -1.95
MSH6-211ENST00000606499 KRTAP19-7Q3SYF9 63 aa2.88□□□□□ -1.95
MSH6-211ENST00000606499 KRTAP19-5Q3LI72 72 aa2.86□□□□□ -1.95
MSH6-211ENST00000606499 NEBP20929 6669 aa2.85□□□□□ -1.95
MSH6-211ENST00000606499 MT1EP04732 61 aa2.83□□□□□ -1.96
MSH6-211ENST00000606499 SPRR2EP22531 72 aa2.83□□□□□ -1.96
MSH6-211ENST00000606499 SPRR2BP35325 72 aa2.83□□□□□ -1.96
MSH6-211ENST00000606499 SPRR2AP35326 72 aa2.83□□□□□ -1.96
MSH6-211ENST00000606499 LCE1AQ5T7P2 110 aa2.82□□□□□ -1.96
MSH6-211ENST00000606499 KRTAP12-3P60328 96 aa2.79□□□□□ -1.96
MSH6-211ENST00000606499 KRTAP5-3Q6L8H2 238 aa2.77□□□□□ -1.97
MSH6-211ENST00000606499 KRTAP19-3Q7Z4W3 81 aa2.76□□□□□ -1.97
MSH6-211ENST00000606499 PP632Q6XCG6 107 aa2.75□□□□□ -1.97
MSH6-211ENST00000606499 MT1LQ93083 61 aa2.75□□□□□ -1.97
MSH6-211ENST00000606499 SPRR2DP22532 72 aa2.73□□□□□ -1.97
MSH6-211ENST00000606499 PRAC1Q96KF2 57 aa2.72□□□□□ -1.97
MSH6-211ENST00000606499 MT1GP13640 62 aa2.7□□□□□ -1.98
MSH6-211ENST00000606499 MT1MQ8N339 61 aa2.69□□□□□ -1.98
MSH6-211ENST00000606499 DSTQ03001 7570 aaKnown RBP2.67□□□□□ -1.98
MSH6-211ENST00000606499 KRTAP20-1Q3LI63 56 aa2.66□□□□□ -1.98
MSH6-211ENST00000606499 KRTAP2-3P0C7H8 128 aa2.64□□□□□ -1.99
MSH6-211ENST00000606499 KRTAP4-3Q9BYR4 195 aa2.64□□□□□ -1.99
MSH6-211ENST00000606499 KRTAP2-4Q9BYR9 128 aa2.64□□□□□ -1.99
MSH6-211ENST00000606499 LCE3CQ5T5A8 94 aa2.59□□□□□ -1.99
MSH6-211ENST00000606499 KRTAP2-2Q9BYT5 123 aa2.57□□□□□ -2
MSH6-211ENST00000606499 KRTAP2-1Q9BYU5 128 aa2.57□□□□□ -2
MSH6-211ENST00000606499 MT3P25713 68 aa2.52□□□□□ -2.01
MSH6-211ENST00000606499 KRTAP9-6A8MVA2 160 aa2.47□□□□□ -2.01
MSH6-211ENST00000606499 LUZP6Q538Z0 58 aa2.46□□□□□ -2.02
MSH6-211ENST00000606499 NDUFAF8A1L188 74 aa2.45□□□□□ -2.02
MSH6-211ENST00000606499 KRTAP5-5Q701N2 237 aaPredicted RBP2.44□□□□□ -2.02
MSH6-211ENST00000606499 KRTAP5-4Q6L8H1 288 aa2.42□□□□□ -2.02
MSH6-211ENST00000606499 HMCN1Q96RW7 5635 aa2.41□□□□□ -2.02
MSH6-211ENST00000606499 SPRR5A0A1B0GTR4 108 aa2.38□□□□□ -2.03
MSH6-211ENST00000606499 MT4P47944 62 aa2.38□□□□□ -2.03
MSH6-211ENST00000606499 MT1AP04731 61 aa2.33□□□□□ -2.04
MSH6-211ENST00000606499 KRTAP6-1Q3LI64 71 aa2.33□□□□□ -2.04
MSH6-211ENST00000606499 GPR98Q8WXG9 6306 aa2.3□□□□□ -2.04
MSH6-211ENST00000606499 KRTAP12-4P60329 112 aa2.29□□□□□ -2.04
MSH6-211ENST00000606499 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
MSH6-211ENST00000606499 SYNE1Q8NF91 8797 aaKnown RBP2.29□□□□□ -2.04
MSH6-211ENST00000606499 KRTAP20-2Q3LI61 65 aa2.28□□□□□ -2.04
MSH6-211ENST00000606499 LCE1EQ5T753 118 aa2.28□□□□□ -2.04
MSH6-211ENST00000606499 KRTAP5-11Q6L8G4 156 aa2.24□□□□□ -2.05
MSH6-211ENST00000606499 AHNAK2Q8IVF2 5795 aa2.21□□□□□ -2.06
MSH6-211ENST00000606499 KRTAP6-2Q3LI66 62 aa2.18□□□□□ -2.06
MSH6-211ENST00000606499 KRTAP5-2Q701N4 177 aa2.16□□□□□ -2.06
MSH6-211ENST00000606499 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
MSH6-211ENST00000606499 OBSCNQ5VST9 7968 aa2.08□□□□□ -2.08
MSH6-211ENST00000606499 KRTAP5-10Q6L8G5 202 aa2.08□□□□□ -2.08
MSH6-211ENST00000606499 LCE3EQ5T5B0 92 aa1.96□□□□□ -2.1
MSH6-211ENST00000606499 KRTAP5-7Q6L8G8 165 aa1.95□□□□□ -2.1
MSH6-211ENST00000606499 KRTAP5-8O75690 187 aa1.94□□□□□ -2.1
MSH6-211ENST00000606499 INE1O15225 51 aa1.93□□□□□ -2.1
MSH6-211ENST00000606499 LCE3DQ9BYE3 92 aa1.91□□□□□ -2.1
MSH6-211ENST00000606499 KRTAP5-1Q6L8H4 278 aa1.9□□□□□ -2.11
MSH6-211ENST00000606499 MUC5ACP98088 5654 aa1.89□□□□□ -2.11
MSH6-211ENST00000606499 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
MSH6-211ENST00000606499 LCE1BQ5T7P3 118 aa1.78□□□□□ -2.12
MSH6-211ENST00000606499 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
MSH6-211ENST00000606499 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
MSH6-211ENST00000606499 LCE1CQ5T751 118 aa1.75□□□□□ -2.13
MSH6-211ENST00000606499 PRM1P04553 51 aa1.52□□□□□ -2.17
MSH6-211ENST00000606499 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
MSH6-211ENST00000606499 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
MSH6-211ENST00000606499 MUC19Q7Z5P9 8384 aa1.25□□□□□ -2.21
MSH6-211ENST00000606499 KRTAP21-1Q3LI58 79 aa0.89□□□□□ -2.27
MSH6-211ENST00000606499 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 13.4 ms