RNA–Protein interactions for RNA: ENST00000604036.1

FOCAD-211, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-211ENST00000604036 KRTAP19-3Q7Z4W3 81 aa8.71□□□□□ -1.02
FOCAD-211ENST00000604036 LCE5AQ5TCM9 118 aa8.67□□□□□ -1.02
FOCAD-211ENST00000604036 KRTAP25-1Q3LHN0 102 aa8.61□□□□□ -1.03
FOCAD-211ENST00000604036 MT1GP13640 62 aa8.54□□□□□ -1.04
FOCAD-211ENST00000604036 MT1LQ93083 61 aa8.51□□□□□ -1.05
FOCAD-211ENST00000604036 PP632Q6XCG6 107 aa8.48□□□□□ -1.05
FOCAD-211ENST00000604036 CDC42SE1Q9NRR8 79 aa8.48□□□□□ -1.05
FOCAD-211ENST00000604036 KRTAP12-3P60328 96 aa8.46□□□□□ -1.06
FOCAD-211ENST00000604036 GPR98Q8WXG9 6306 aa8.4□□□□□ -1.06
FOCAD-211ENST00000604036 MT1MQ8N339 61 aa8.4□□□□□ -1.06
FOCAD-211ENST00000604036 DSTQ03001 7570 aaKnown RBP8.35□□□□□ -1.07
FOCAD-211ENST00000604036 KRTAP4-9Q9BYQ8 210 aa8.33□□□□□ -1.08
FOCAD-211ENST00000604036 ROMO1P60602 79 aa8.32□□□□□ -1.08
FOCAD-211ENST00000604036 KRTAP23-1A1A580 65 aa8.29□□□□□ -1.08
FOCAD-211ENST00000604036 KRTAP4-3Q9BYR4 195 aa8.21□□□□□ -1.1
FOCAD-211ENST00000604036 KRTAP4-7Q9BYR0 210 aa8.14□□□□□ -1.11
FOCAD-211ENST00000604036 LCE1DQ5T752 114 aa8.05□□□□□ -1.12
FOCAD-211ENST00000604036 KRTAP15-1Q3LI76 137 aa8.03□□□□□ -1.12
FOCAD-211ENST00000604036 KRTAP19-4Q3LI73 84 aa7.97□□□□□ -1.13
FOCAD-211ENST00000604036 BRK1Q8WUW1 75 aa7.96□□□□□ -1.14
FOCAD-211ENST00000604036 MT4P47944 62 aa7.95□□□□□ -1.14
FOCAD-211ENST00000604036 LCE4AQ5TA78 99 aa7.95□□□□□ -1.14
FOCAD-211ENST00000604036 LCE3CQ5T5A8 94 aa7.83□□□□□ -1.16
FOCAD-211ENST00000604036 HMCN1Q96RW7 5635 aa7.82□□□□□ -1.16
FOCAD-211ENST00000604036 KRTAP5-4Q6L8H1 288 aa7.79□□□□□ -1.16
FOCAD-211ENST00000604036 LOC100996750A0A140TA64 210 aa7.69□□□□□ -1.18
FOCAD-211ENST00000604036 AHNAK2Q8IVF2 5795 aa7.68□□□□□ -1.18
FOCAD-211ENST00000604036 KRTAP5-10Q6L8G5 202 aa7.68□□□□□ -1.18
FOCAD-211ENST00000604036 KRTAP5-5Q701N2 237 aaPredicted RBP7.65□□□□□ -1.18
FOCAD-211ENST00000604036 KRTAP4-6Q9BYQ5 205 aa7.62□□□□□ -1.19
FOCAD-211ENST00000604036 PMAIP1Q13794 54 aa7.5□□□□□ -1.21
FOCAD-211ENST00000604036 KRTAP5-7Q6L8G8 165 aa7.46□□□□□ -1.22
FOCAD-211ENST00000604036 KRTAP5-3Q6L8H2 238 aa7.43□□□□□ -1.22
FOCAD-211ENST00000604036 KRTAP12-4P60329 112 aa7.4□□□□□ -1.22
FOCAD-211ENST00000604036 KRTAP9-6A8MVA2 160 aa7.36□□□□□ -1.23
FOCAD-211ENST00000604036 KRTAP20-2Q3LI61 65 aa7.35□□□□□ -1.23
FOCAD-211ENST00000604036 SPRR5A0A1B0GTR4 108 aa7.34□□□□□ -1.23
FOCAD-211ENST00000604036 MT1AP04731 61 aa7.24□□□□□ -1.25
FOCAD-211ENST00000604036 SYNE1Q8NF91 8797 aaKnown RBP7.23□□□□□ -1.25
FOCAD-211ENST00000604036 KRTAP6-1Q3LI64 71 aa7.2□□□□□ -1.26
FOCAD-211ENST00000604036 PRO0628Q9UI54 55 aa7.18□□□□□ -1.26
FOCAD-211ENST00000604036 PRAC1Q96KF2 57 aa7.15□□□□□ -1.26
FOCAD-211ENST00000604036 KRTAP9-4Q9BYQ2 154 aa6.98□□□□□ -1.29
FOCAD-211ENST00000604036 KRTAP5-2Q701N4 177 aa6.88□□□□□ -1.31
FOCAD-211ENST00000604036 KRTAP6-2Q3LI66 62 aa6.81□□□□□ -1.32
FOCAD-211ENST00000604036 KTN1-AS1Q86SY8 53 aa6.8□□□□□ -1.32
FOCAD-211ENST00000604036 KRTAP4-11Q9BYQ6 195 aa6.77□□□□□ -1.33
FOCAD-211ENST00000604036 MT3P25713 68 aa6.63□□□□□ -1.35
FOCAD-211ENST00000604036 SVIPQ8NHG7 77 aa6.53□□□□□ -1.36
FOCAD-211ENST00000604036 KRTAP5-8O75690 187 aa6.52□□□□□ -1.37
FOCAD-211ENST00000604036 MUC5ACP98088 5654 aa6.43□□□□□ -1.38
FOCAD-211ENST00000604036 AHNAKQ09666 5890 aaKnown RBP6.42□□□□□ -1.38
FOCAD-211ENST00000604036 MUC5BQ9HC84 5762 aaPredicted RBP6.4□□□□□ -1.39
FOCAD-211ENST00000604036 KRTAP9-9Q9BYP9 154 aa6.37□□□□□ -1.39
FOCAD-211ENST00000604036 OBSCNQ5VST9 7968 aa6.33□□□□□ -1.4
FOCAD-211ENST00000604036 KRTAP5-1Q6L8H4 278 aa6.11□□□□□ -1.43
FOCAD-211ENST00000604036 LUZP6Q538Z0 58 aa5.99□□□□□ -1.45
FOCAD-211ENST00000604036 LCE1EQ5T753 118 aa5.98□□□□□ -1.45
FOCAD-211ENST00000604036 LCE3DQ9BYE3 92 aa5.72□□□□□ -1.49
FOCAD-211ENST00000604036 LCE1BQ5T7P3 118 aa5.65□□□□□ -1.5
FOCAD-211ENST00000604036 KRTAP4-2Q9BYR5 136 aa5.62□□□□□ -1.51
FOCAD-211ENST00000604036 LCE1CQ5T751 118 aa5.55□□□□□ -1.52
FOCAD-211ENST00000604036 LCE3EQ5T5B0 92 aa5.44□□□□□ -1.54
FOCAD-211ENST00000604036 NDUFAF8A1L188 74 aa5.1□□□□□ -1.59
FOCAD-211ENST00000604036 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.07□□□□□ -1.6
FOCAD-211ENST00000604036 KRTAP4-12Q9BQ66 201 aa5.06□□□□□ -1.6
FOCAD-211ENST00000604036 KRTAP5-11Q6L8G4 156 aa4.99□□□□□ -1.61
FOCAD-211ENST00000604036 H3BS24 57 aa4.81□□□□□ -1.64
FOCAD-211ENST00000604036 LCE1FQ5T754 118 aa4.77□□□□□ -1.65
FOCAD-211ENST00000604036 KRTAP21-2Q3LI59 83 aa4.72□□□□□ -1.65
FOCAD-211ENST00000604036 PHGR1C9JFL3 82 aa4.57□□□□□ -1.68
FOCAD-211ENST00000604036 KRTAP4-4Q9BYR3 166 aa4.31□□□□□ -1.72
FOCAD-211ENST00000604036 PRM1P04553 51 aa4.28□□□□□ -1.72
FOCAD-211ENST00000604036 A0A0A0MQY5 61 aa4.17□□□□□ -1.74
FOCAD-211ENST00000604036 INE1O15225 51 aa4.13□□□□□ -1.75
FOCAD-211ENST00000604036 MUC19Q7Z5P9 8384 aa3.9□□□□□ -1.78
FOCAD-211ENST00000604036 KRTAP21-1Q3LI58 79 aa3.48□□□□□ -1.85
FOCAD-211ENST00000604036 MUC16Q8WXI7 14507 aa2.83□□□□□ -1.96
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms