RNA–Protein interactions for RNA: ENST00000603621.1

TUBE1-204, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-204ENST00000603621 LINC01558Q9Y6Z2 57 aa5.45□□□□□ -1.54
TUBE1-204ENST00000603621 KRTAP2-2Q9BYT5 123 aa5.41□□□□□ -1.54
TUBE1-204ENST00000603621 KRTAP2-1Q9BYU5 128 aa5.41□□□□□ -1.54
TUBE1-204ENST00000603621 KRTAP19-7Q3SYF9 63 aa5.39□□□□□ -1.55
TUBE1-204ENST00000603621 A0A0A0MQY5 61 aa5.38□□□□□ -1.55
TUBE1-204ENST00000603621 MT1EP04732 61 aa5.35□□□□□ -1.55
TUBE1-204ENST00000603621 C10orf95Q9H7T3 257 aa5.33□□□□□ -1.56
TUBE1-204ENST00000603621 KRTAP19-5Q3LI72 72 aa5.32□□□□□ -1.56
TUBE1-204ENST00000603621 UQCR11O14957 56 aa5.31□□□□□ -1.56
TUBE1-204ENST00000603621 TNP1P09430 55 aa5.29□□□□□ -1.56
TUBE1-204ENST00000603621 KRTAP19-3Q7Z4W3 81 aa5.29□□□□□ -1.56
TUBE1-204ENST00000603621 LCE3AQ5TA76 89 aa5.24□□□□□ -1.57
TUBE1-204ENST00000603621 MIR22HGQ0VDD5 57 aa5.21□□□□□ -1.58
TUBE1-204ENST00000603621 DSTQ03001 7570 aaKnown RBP5.2□□□□□ -1.58
TUBE1-204ENST00000603621 PSPHP1O15172 72 aa5.18□□□□□ -1.58
TUBE1-204ENST00000603621 MT1GP13640 62 aa5.17□□□□□ -1.58
TUBE1-204ENST00000603621 V9GYY9 64 aa5.16□□□□□ -1.58
TUBE1-204ENST00000603621 PP632Q6XCG6 107 aa5.13□□□□□ -1.59
TUBE1-204ENST00000603621 MT1LQ93083 61 aa5.13□□□□□ -1.59
TUBE1-204ENST00000603621 Q1T7F1 81 aa5.12□□□□□ -1.59
TUBE1-204ENST00000603621 K7ERS5 55 aa5.1□□□□□ -1.59
TUBE1-204ENST00000603621 MT1MQ8N339 61 aa5.1□□□□□ -1.59
TUBE1-204ENST00000603621 KRTAP12-3P60328 96 aa5.03□□□□□ -1.6
TUBE1-204ENST00000603621 KRTAP25-1Q3LHN0 102 aa5.01□□□□□ -1.61
TUBE1-204ENST00000603621 KRTAP4-3Q9BYR4 195 aa5.01□□□□□ -1.61
TUBE1-204ENST00000603621 A6NED7 52 aa5□□□□□ -1.61
TUBE1-204ENST00000603621 KRTAP15-1Q3LI76 137 aa4.97□□□□□ -1.61
TUBE1-204ENST00000603621 RPS28P62857 69 aaKnown RBP4.9□□□□□ -1.63
TUBE1-204ENST00000603621 MT4P47944 62 aa4.86□□□□□ -1.63
TUBE1-204ENST00000603621 CDC42SE1Q9NRR8 79 aa4.83□□□□□ -1.64
TUBE1-204ENST00000603621 HMCN1Q96RW7 5635 aa4.78□□□□□ -1.64
TUBE1-204ENST00000603621 KRTAP5-4Q6L8H1 288 aa4.77□□□□□ -1.65
TUBE1-204ENST00000603621 GPR98Q8WXG9 6306 aa4.77□□□□□ -1.65
TUBE1-204ENST00000603621 ROMO1P60602 79 aa4.76□□□□□ -1.65
TUBE1-204ENST00000603621 LCE3CQ5T5A8 94 aa4.63□□□□□ -1.67
TUBE1-204ENST00000603621 KRTAP5-5Q701N2 237 aaPredicted RBP4.63□□□□□ -1.67
TUBE1-204ENST00000603621 AHNAK2Q8IVF2 5795 aa4.59□□□□□ -1.67
TUBE1-204ENST00000603621 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.56□□□□□ -1.68
TUBE1-204ENST00000603621 KRTAP12-4P60329 112 aa4.52□□□□□ -1.69
TUBE1-204ENST00000603621 KRTAP20-2Q3LI61 65 aa4.52□□□□□ -1.69
TUBE1-204ENST00000603621 SPRR5A0A1B0GTR4 108 aa4.48□□□□□ -1.69
TUBE1-204ENST00000603621 SYNE1Q8NF91 8797 aaKnown RBP4.48□□□□□ -1.69
TUBE1-204ENST00000603621 KRTAP5-10Q6L8G5 202 aa4.44□□□□□ -1.7
TUBE1-204ENST00000603621 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
TUBE1-204ENST00000603621 KRTAP5-11Q6L8G4 156 aa4.39□□□□□ -1.71
TUBE1-204ENST00000603621 BRK1Q8WUW1 75 aa4.38□□□□□ -1.71
TUBE1-204ENST00000603621 KRTAP9-6A8MVA2 160 aa4.37□□□□□ -1.71
TUBE1-204ENST00000603621 MT1AP04731 61 aa4.36□□□□□ -1.71
TUBE1-204ENST00000603621 KRTAP6-1Q3LI64 71 aa4.35□□□□□ -1.71
TUBE1-204ENST00000603621 KRTAP5-7Q6L8G8 165 aa4.25□□□□□ -1.73
TUBE1-204ENST00000603621 KRTAP5-2Q701N4 177 aa4.19□□□□□ -1.74
TUBE1-204ENST00000603621 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
TUBE1-204ENST00000603621 PMAIP1Q13794 54 aa4.11□□□□□ -1.75
TUBE1-204ENST00000603621 NDUFAF8A1L188 74 aa4□□□□□ -1.77
TUBE1-204ENST00000603621 MT3P25713 68 aa3.99□□□□□ -1.77
TUBE1-204ENST00000603621 OBSCNQ5VST9 7968 aa3.98□□□□□ -1.77
TUBE1-204ENST00000603621 KRTAP5-8O75690 187 aa3.96□□□□□ -1.78
TUBE1-204ENST00000603621 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
TUBE1-204ENST00000603621 KRTAP5-1Q6L8H4 278 aa3.94□□□□□ -1.78
TUBE1-204ENST00000603621 KRTAP4-4Q9BYR3 166 aa3.82□□□□□ -1.8
TUBE1-204ENST00000603621 PRO0628Q9UI54 55 aa3.81□□□□□ -1.8
TUBE1-204ENST00000603621 MUC5BQ9HC84 5762 aaPredicted RBP3.76□□□□□ -1.81
TUBE1-204ENST00000603621 AHNAKQ09666 5890 aaKnown RBP3.73□□□□□ -1.81
TUBE1-204ENST00000603621 MUC5ACP98088 5654 aa3.72□□□□□ -1.81
TUBE1-204ENST00000603621 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
TUBE1-204ENST00000603621 KTN1-AS1Q86SY8 53 aa3.65□□□□□ -1.83
TUBE1-204ENST00000603621 LCE1BQ5T7P3 118 aa3.47□□□□□ -1.85
TUBE1-204ENST00000603621 LCE3DQ9BYE3 92 aa3.37□□□□□ -1.87
TUBE1-204ENST00000603621 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
TUBE1-204ENST00000603621 LUZP6Q538Z0 58 aa3.33□□□□□ -1.88
TUBE1-204ENST00000603621 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
TUBE1-204ENST00000603621 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
TUBE1-204ENST00000603621 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
TUBE1-204ENST00000603621 PRM1P04553 51 aa2.46□□□□□ -2.02
TUBE1-204ENST00000603621 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
TUBE1-204ENST00000603621 INE1O15225 51 aa2.14□□□□□ -2.07
TUBE1-204ENST00000603621 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
TUBE1-204ENST00000603621 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 12.5 ms