RNA–Protein interactions for RNA: ENST00000603055.1

NLRC3-203, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5

Gene NLRC3, Length 1,158 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-203ENST00000603055 KTN1-AS1Q86SY8 53 aa6.81□□□□□ -1.32
NLRC3-203ENST00000603055 LCE5AQ5TCM9 118 aa6.79□□□□□ -1.32
NLRC3-203ENST00000603055 MT1EP04732 61 aa6.77□□□□□ -1.33
NLRC3-203ENST00000603055 ROMO1P60602 79 aa6.77□□□□□ -1.33
NLRC3-203ENST00000603055 DSTQ03001 7570 aaKnown RBP6.76□□□□□ -1.33
NLRC3-203ENST00000603055 KRTAP19-3Q7Z4W3 81 aa6.74□□□□□ -1.33
NLRC3-203ENST00000603055 GPR98Q8WXG9 6306 aa6.63□□□□□ -1.35
NLRC3-203ENST00000603055 KRTAP4-9Q9BYQ8 210 aa6.62□□□□□ -1.35
NLRC3-203ENST00000603055 KRTAP19-5Q3LI72 72 aa6.61□□□□□ -1.35
NLRC3-203ENST00000603055 C10orf95Q9H7T3 257 aa6.58□□□□□ -1.36
NLRC3-203ENST00000603055 MT1GP13640 62 aa6.56□□□□□ -1.36
NLRC3-203ENST00000603055 TNP1P09430 55 aa6.53□□□□□ -1.36
NLRC3-203ENST00000603055 KRTAP25-1Q3LHN0 102 aa6.52□□□□□ -1.37
NLRC3-203ENST00000603055 PRAC1Q96KF2 57 aa6.52□□□□□ -1.37
NLRC3-203ENST00000603055 PP632Q6XCG6 107 aa6.48□□□□□ -1.37
NLRC3-203ENST00000603055 MT1MQ8N339 61 aa6.46□□□□□ -1.38
NLRC3-203ENST00000603055 LCE1DQ5T752 114 aa6.44□□□□□ -1.38
NLRC3-203ENST00000603055 MT1LQ93083 61 aa6.44□□□□□ -1.38
NLRC3-203ENST00000603055 LCE3AQ5TA76 89 aa6.38□□□□□ -1.39
NLRC3-203ENST00000603055 LCE4AQ5TA78 99 aa6.38□□□□□ -1.39
NLRC3-203ENST00000603055 HMCN1Q96RW7 5635 aa6.38□□□□□ -1.39
NLRC3-203ENST00000603055 KRTAP23-1A1A580 65 aa6.35□□□□□ -1.39
NLRC3-203ENST00000603055 MT4P47944 62 aa6.34□□□□□ -1.39
NLRC3-203ENST00000603055 KRTAP4-3Q9BYR4 195 aa6.33□□□□□ -1.4
NLRC3-203ENST00000603055 KRTAP5-4Q6L8H1 288 aa6.26□□□□□ -1.41
NLRC3-203ENST00000603055 AHNAK2Q8IVF2 5795 aa6.22□□□□□ -1.41
NLRC3-203ENST00000603055 KRTAP4-6Q9BYQ5 205 aa6.17□□□□□ -1.42
NLRC3-203ENST00000603055 KRTAP4-7Q9BYR0 210 aa6.14□□□□□ -1.43
NLRC3-203ENST00000603055 KRTAP12-3P60328 96 aa6.12□□□□□ -1.43
NLRC3-203ENST00000603055 KRTAP5-10Q6L8G5 202 aa6.07□□□□□ -1.44
NLRC3-203ENST00000603055 KRTAP5-5Q701N2 237 aaPredicted RBP5.95□□□□□ -1.46
NLRC3-203ENST00000603055 KRTAP20-2Q3LI61 65 aa5.91□□□□□ -1.46
NLRC3-203ENST00000603055 KRTAP5-3Q6L8H2 238 aa5.9□□□□□ -1.46
NLRC3-203ENST00000603055 SPRR5A0A1B0GTR4 108 aa5.86□□□□□ -1.47
NLRC3-203ENST00000603055 KRTAP5-7Q6L8G8 165 aa5.84□□□□□ -1.47
NLRC3-203ENST00000603055 LOC100996750A0A140TA64 210 aa5.82□□□□□ -1.48
NLRC3-203ENST00000603055 KRTAP19-4Q3LI73 84 aa5.82□□□□□ -1.48
NLRC3-203ENST00000603055 KRTAP15-1Q3LI76 137 aa5.82□□□□□ -1.48
NLRC3-203ENST00000603055 SYNE1Q8NF91 8797 aaKnown RBP5.8□□□□□ -1.48
NLRC3-203ENST00000603055 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
NLRC3-203ENST00000603055 LCE3CQ5T5A8 94 aa5.62□□□□□ -1.51
NLRC3-203ENST00000603055 MT1AP04731 61 aa5.48□□□□□ -1.53
NLRC3-203ENST00000603055 KRTAP6-1Q3LI64 71 aa5.47□□□□□ -1.53
NLRC3-203ENST00000603055 KRTAP5-2Q701N4 177 aa5.45□□□□□ -1.54
NLRC3-203ENST00000603055 LUZP6Q538Z0 58 aa5.44□□□□□ -1.54
NLRC3-203ENST00000603055 KRTAP4-11Q9BYQ6 195 aa5.43□□□□□ -1.54
NLRC3-203ENST00000603055 KRTAP9-6A8MVA2 160 aa5.34□□□□□ -1.55
NLRC3-203ENST00000603055 KRTAP9-4Q9BYQ2 154 aa5.31□□□□□ -1.56
NLRC3-203ENST00000603055 KRTAP5-8O75690 187 aa5.26□□□□□ -1.57
NLRC3-203ENST00000603055 KRTAP6-2Q3LI66 62 aa5.25□□□□□ -1.57
NLRC3-203ENST00000603055 NDUFAF8A1L188 74 aa5.24□□□□□ -1.57
NLRC3-203ENST00000603055 AHNAKQ09666 5890 aaKnown RBP5.19□□□□□ -1.58
NLRC3-203ENST00000603055 OBSCNQ5VST9 7968 aa5.17□□□□□ -1.58
NLRC3-203ENST00000603055 MUC5ACP98088 5654 aa5.15□□□□□ -1.58
NLRC3-203ENST00000603055 MUC5BQ9HC84 5762 aaPredicted RBP5.15□□□□□ -1.59
NLRC3-203ENST00000603055 MT3P25713 68 aa5.01□□□□□ -1.61
NLRC3-203ENST00000603055 KRTAP9-9Q9BYP9 154 aa4.99□□□□□ -1.61
NLRC3-203ENST00000603055 KRTAP5-1Q6L8H4 278 aa4.92□□□□□ -1.62
NLRC3-203ENST00000603055 A0A0A0MQY5 61 aa4.71□□□□□ -1.66
NLRC3-203ENST00000603055 H3BS24 57 aa4.63□□□□□ -1.67
NLRC3-203ENST00000603055 LCE1EQ5T753 118 aa4.63□□□□□ -1.67
NLRC3-203ENST00000603055 INE1O15225 51 aa4.44□□□□□ -1.7
NLRC3-203ENST00000603055 KRTAP4-2Q9BYR5 136 aa4.43□□□□□ -1.7
NLRC3-203ENST00000603055 LCE1BQ5T7P3 118 aa4.38□□□□□ -1.71
NLRC3-203ENST00000603055 LCE1CQ5T751 118 aa4.3□□□□□ -1.72
NLRC3-203ENST00000603055 LCE3DQ9BYE3 92 aa4.16□□□□□ -1.74
NLRC3-203ENST00000603055 KRTAP4-12Q9BQ66 201 aa4.06□□□□□ -1.76
NLRC3-203ENST00000603055 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
NLRC3-203ENST00000603055 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
NLRC3-203ENST00000603055 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.91□□□□□ -1.78
NLRC3-203ENST00000603055 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
NLRC3-203ENST00000603055 KRTAP21-2Q3LI59 83 aa3.62□□□□□ -1.83
NLRC3-203ENST00000603055 PHGR1C9JFL3 82 aa3.53□□□□□ -1.84
NLRC3-203ENST00000603055 PRM1P04553 51 aa3.49□□□□□ -1.85
NLRC3-203ENST00000603055 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
NLRC3-203ENST00000603055 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
NLRC3-203ENST00000603055 KRTAP21-1Q3LI58 79 aa2.68□□□□□ -1.98
NLRC3-203ENST00000603055 MUC16Q8WXI7 14507 aa2.22□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 46 ms