RNA–Protein interactions for RNA: ENST00000602660.1

SFXN2-208, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 667 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-208ENST00000602660 C10orf95Q9H7T3 257 aa5.89□□□□□ -1.47
SFXN2-208ENST00000602660 PRO0628Q9UI54 55 aa5.89□□□□□ -1.47
SFXN2-208ENST00000602660 KRTAP19-5Q3LI72 72 aa5.85□□□□□ -1.47
SFXN2-208ENST00000602660 TNP1P09430 55 aa5.84□□□□□ -1.47
SFXN2-208ENST00000602660 PMAIP1Q13794 54 aa5.79□□□□□ -1.48
SFXN2-208ENST00000602660 DSTQ03001 7570 aaKnown RBP5.75□□□□□ -1.49
SFXN2-208ENST00000602660 ROMO1P60602 79 aa5.74□□□□□ -1.49
SFXN2-208ENST00000602660 MT1GP13640 62 aa5.73□□□□□ -1.49
SFXN2-208ENST00000602660 LCE3AQ5TA76 89 aa5.73□□□□□ -1.49
SFXN2-208ENST00000602660 MT1LQ93083 61 aa5.7□□□□□ -1.5
SFXN2-208ENST00000602660 MT1MQ8N339 61 aa5.67□□□□□ -1.5
SFXN2-208ENST00000602660 KRTAP25-1Q3LHN0 102 aa5.65□□□□□ -1.5
SFXN2-208ENST00000602660 PP632Q6XCG6 107 aa5.63□□□□□ -1.51
SFXN2-208ENST00000602660 KRTAP4-9Q9BYQ8 210 aa5.58□□□□□ -1.52
SFXN2-208ENST00000602660 KRTAP4-3Q9BYR4 195 aa5.56□□□□□ -1.52
SFXN2-208ENST00000602660 KRTAP12-3P60328 96 aa5.49□□□□□ -1.53
SFXN2-208ENST00000602660 LCE1DQ5T752 114 aa5.47□□□□□ -1.53
SFXN2-208ENST00000602660 KTN1-AS1Q86SY8 53 aa5.46□□□□□ -1.54
SFXN2-208ENST00000602660 PRAC1Q96KF2 57 aa5.45□□□□□ -1.54
SFXN2-208ENST00000602660 LCE4AQ5TA78 99 aa5.44□□□□□ -1.54
SFXN2-208ENST00000602660 KRTAP4-7Q9BYR0 210 aa5.44□□□□□ -1.54
SFXN2-208ENST00000602660 KRTAP23-1A1A580 65 aa5.42□□□□□ -1.54
SFXN2-208ENST00000602660 KRTAP5-4Q6L8H1 288 aa5.41□□□□□ -1.54
SFXN2-208ENST00000602660 MT4P47944 62 aa5.38□□□□□ -1.55
SFXN2-208ENST00000602660 HMCN1Q96RW7 5635 aa5.34□□□□□ -1.55
SFXN2-208ENST00000602660 GPR98Q8WXG9 6306 aa5.31□□□□□ -1.56
SFXN2-208ENST00000602660 KRTAP4-6Q9BYQ5 205 aa5.29□□□□□ -1.56
SFXN2-208ENST00000602660 KRTAP5-5Q701N2 237 aaPredicted RBP5.23□□□□□ -1.57
SFXN2-208ENST00000602660 KRTAP15-1Q3LI76 137 aa5.22□□□□□ -1.57
SFXN2-208ENST00000602660 SVIPQ8NHG7 77 aa5.19□□□□□ -1.58
SFXN2-208ENST00000602660 AHNAK2Q8IVF2 5795 aa5.18□□□□□ -1.58
SFXN2-208ENST00000602660 LOC100996750A0A140TA64 210 aa5.15□□□□□ -1.59
SFXN2-208ENST00000602660 KRTAP19-4Q3LI73 84 aa5.15□□□□□ -1.59
SFXN2-208ENST00000602660 KRTAP5-10Q6L8G5 202 aa5.09□□□□□ -1.59
SFXN2-208ENST00000602660 KRTAP20-2Q3LI61 65 aa5.08□□□□□ -1.6
SFXN2-208ENST00000602660 LCE3CQ5T5A8 94 aa5.07□□□□□ -1.6
SFXN2-208ENST00000602660 SPRR5A0A1B0GTR4 108 aa5.04□□□□□ -1.6
SFXN2-208ENST00000602660 SYNE1Q8NF91 8797 aaKnown RBP5.03□□□□□ -1.6
SFXN2-208ENST00000602660 KRTAP12-4P60329 112 aa4.99□□□□□ -1.61
SFXN2-208ENST00000602660 KRTAP5-3Q6L8H2 238 aa4.96□□□□□ -1.62
SFXN2-208ENST00000602660 KRTAP5-7Q6L8G8 165 aa4.87□□□□□ -1.63
SFXN2-208ENST00000602660 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
SFXN2-208ENST00000602660 MT1AP04731 61 aa4.84□□□□□ -1.63
SFXN2-208ENST00000602660 KRTAP6-1Q3LI64 71 aa4.83□□□□□ -1.64
SFXN2-208ENST00000602660 KRTAP5-2Q701N4 177 aa4.76□□□□□ -1.65
SFXN2-208ENST00000602660 H3BS24 57 aa4.68□□□□□ -1.66
SFXN2-208ENST00000602660 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
SFXN2-208ENST00000602660 KRTAP4-11Q9BYQ6 195 aa4.62□□□□□ -1.67
SFXN2-208ENST00000602660 KRTAP6-2Q3LI66 62 aa4.59□□□□□ -1.67
SFXN2-208ENST00000602660 KRTAP5-8O75690 187 aa4.5□□□□□ -1.69
SFXN2-208ENST00000602660 LUZP6Q538Z0 58 aa4.41□□□□□ -1.7
SFXN2-208ENST00000602660 MT3P25713 68 aa4.38□□□□□ -1.71
SFXN2-208ENST00000602660 OBSCNQ5VST9 7968 aa4.38□□□□□ -1.71
SFXN2-208ENST00000602660 KRTAP5-1Q6L8H4 278 aa4.26□□□□□ -1.73
SFXN2-208ENST00000602660 NDUFAF8A1L188 74 aa4.23□□□□□ -1.73
SFXN2-208ENST00000602660 MUC5ACP98088 5654 aa4.2□□□□□ -1.74
SFXN2-208ENST00000602660 MUC5BQ9HC84 5762 aaPredicted RBP4.2□□□□□ -1.74
SFXN2-208ENST00000602660 KRTAP9-9Q9BYP9 154 aa4.18□□□□□ -1.74
SFXN2-208ENST00000602660 AHNAKQ09666 5890 aaKnown RBP4.18□□□□□ -1.74
SFXN2-208ENST00000602660 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
SFXN2-208ENST00000602660 KRTAP4-12Q9BQ66 201 aa3.93□□□□□ -1.78
SFXN2-208ENST00000602660 KRTAP4-2Q9BYR5 136 aa3.87□□□□□ -1.79
SFXN2-208ENST00000602660 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
SFXN2-208ENST00000602660 LCE1CQ5T751 118 aa3.76□□□□□ -1.81
SFXN2-208ENST00000602660 LCE3DQ9BYE3 92 aa3.71□□□□□ -1.82
SFXN2-208ENST00000602660 A0A0A0MQY5 61 aa3.64□□□□□ -1.83
SFXN2-208ENST00000602660 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
SFXN2-208ENST00000602660 INE1O15225 51 aa3.47□□□□□ -1.85
SFXN2-208ENST00000602660 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.46□□□□□ -1.86
SFXN2-208ENST00000602660 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
SFXN2-208ENST00000602660 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
SFXN2-208ENST00000602660 KRTAP21-2Q3LI59 83 aa3.2□□□□□ -1.9
SFXN2-208ENST00000602660 PRM1P04553 51 aa2.98□□□□□ -1.93
SFXN2-208ENST00000602660 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
SFXN2-208ENST00000602660 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
SFXN2-208ENST00000602660 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
SFXN2-208ENST00000602660 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
SFXN2-208ENST00000602660 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 9.4 ms