RNA–Protein interactions for RNA: ENST00000602591.1

HCG18-246, Transcript of HLA complex group 18, humanhuman

Gene HCG18, Length 1,976 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-246ENST00000602591 FCGBPQ9Y6R7 5405 aaPredicted RBP4.91□□□□□ -1.62
HCG18-246ENST00000602591 KRTAP19-6Q3LI70 58 aa4.9□□□□□ -1.63
HCG18-246ENST00000602591 PP632Q6XCG6 107 aa4.84□□□□□ -1.63
HCG18-246ENST00000602591 SPRR5A0A1B0GTR4 108 aa4.8□□□□□ -1.64
HCG18-246ENST00000602591 KMT2DO14686 5537 aa4.77□□□□□ -1.65
HCG18-246ENST00000602591 KRTAP10-7P60409 375 aaPredicted RBP4.77□□□□□ -1.65
HCG18-246ENST00000602591 KRTAP19-4Q3LI73 84 aa4.69□□□□□ -1.66
HCG18-246ENST00000602591 MACF1Q9UPN3 7388 aaKnown RBP4.68□□□□□ -1.66
HCG18-246ENST00000602591 KRTAP10-12P60413 245 aa4.66□□□□□ -1.66
HCG18-246ENST00000602591 TNP1P09430 55 aa4.62□□□□□ -1.67
HCG18-246ENST00000602591 SYNE2Q8WXH0 6885 aaKnown RBP4.59□□□□□ -1.67
HCG18-246ENST00000602591 LCE3AQ5TA76 89 aa4.56□□□□□ -1.68
HCG18-246ENST00000602591 MUC12Q9UKN1 5478 aa4.45□□□□□ -1.7
HCG18-246ENST00000602591 KRTAP8-1Q8IUC2 63 aa4.45□□□□□ -1.7
HCG18-246ENST00000602591 KRTAP19-5Q3LI72 72 aa4.44□□□□□ -1.7
HCG18-246ENST00000602591 KRTAP19-7Q3SYF9 63 aa4.44□□□□□ -1.7
HCG18-246ENST00000602591 KRTAP6-3Q3LI67 103 aa4.4□□□□□ -1.7
HCG18-246ENST00000602591 MDN1Q9NU22 5596 aa4.36□□□□□ -1.71
HCG18-246ENST00000602591 SPRR2FQ96RM1 72 aa4.35□□□□□ -1.71
HCG18-246ENST00000602591 KRTAP5-9P26371 169 aa4.34□□□□□ -1.71
HCG18-246ENST00000602591 KRTAP12-3P60328 96 aa4.34□□□□□ -1.71
HCG18-246ENST00000602591 MT1EP04732 61 aa4.34□□□□□ -1.71
HCG18-246ENST00000602591 NEBP20929 6669 aa4.24□□□□□ -1.73
HCG18-246ENST00000602591 MT1LQ93083 61 aa4.23□□□□□ -1.73
HCG18-246ENST00000602591 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
HCG18-246ENST00000602591 KRTAP19-3Q7Z4W3 81 aa4.17□□□□□ -1.74
HCG18-246ENST00000602591 SPRR2EP22531 72 aa4.16□□□□□ -1.74
HCG18-246ENST00000602591 SPRR2BP35325 72 aa4.16□□□□□ -1.74
HCG18-246ENST00000602591 SPRR2AP35326 72 aa4.16□□□□□ -1.74
HCG18-246ENST00000602591 KRTAP4-3Q9BYR4 195 aa4.11□□□□□ -1.75
HCG18-246ENST00000602591 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.1□□□□□ -1.75
HCG18-246ENST00000602591 MT1MQ8N339 61 aa4.1□□□□□ -1.75
HCG18-246ENST00000602591 MT1GP13640 62 aa4.09□□□□□ -1.76
HCG18-246ENST00000602591 DSTQ03001 7570 aaKnown RBP4.07□□□□□ -1.76
HCG18-246ENST00000602591 LCE3CQ5T5A8 94 aa4.05□□□□□ -1.76
HCG18-246ENST00000602591 SPRR2DP22532 72 aa4□□□□□ -1.77
HCG18-246ENST00000602591 KRTAP20-1Q3LI63 56 aa3.99□□□□□ -1.77
HCG18-246ENST00000602591 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
HCG18-246ENST00000602591 KRTAP2-3P0C7H8 128 aa3.94□□□□□ -1.78
HCG18-246ENST00000602591 KRTAP2-4Q9BYR9 128 aa3.94□□□□□ -1.78
HCG18-246ENST00000602591 KRTAP2-2Q9BYT5 123 aa3.9□□□□□ -1.79
HCG18-246ENST00000602591 KRTAP5-11Q6L8G4 156 aa3.83□□□□□ -1.8
HCG18-246ENST00000602591 KRTAP2-1Q9BYU5 128 aa3.82□□□□□ -1.8
HCG18-246ENST00000602591 KRTAP5-5Q701N2 237 aaPredicted RBP3.72□□□□□ -1.81
HCG18-246ENST00000602591 KRTAP5-4Q6L8H1 288 aa3.6□□□□□ -1.83
HCG18-246ENST00000602591 SYNE1Q8NF91 8797 aaKnown RBP3.6□□□□□ -1.83
HCG18-246ENST00000602591 KRTAP6-1Q3LI64 71 aa3.6□□□□□ -1.83
HCG18-246ENST00000602591 MT1AP04731 61 aa3.56□□□□□ -1.84
HCG18-246ENST00000602591 MT4P47944 62 aa3.52□□□□□ -1.85
HCG18-246ENST00000602591 HMCN1Q96RW7 5635 aa3.52□□□□□ -1.85
HCG18-246ENST00000602591 KRTAP5-1Q6L8H4 278 aa3.51□□□□□ -1.85
HCG18-246ENST00000602591 KRTAP12-4P60329 112 aa3.43□□□□□ -1.86
HCG18-246ENST00000602591 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
HCG18-246ENST00000602591 KRTAP20-2Q3LI61 65 aa3.38□□□□□ -1.87
HCG18-246ENST00000602591 KRTAP6-2Q3LI66 62 aa3.33□□□□□ -1.88
HCG18-246ENST00000602591 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
HCG18-246ENST00000602591 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
HCG18-246ENST00000602591 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
HCG18-246ENST00000602591 AHNAK2Q8IVF2 5795 aa3.24□□□□□ -1.89
HCG18-246ENST00000602591 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
HCG18-246ENST00000602591 MT3P25713 68 aa3.2□□□□□ -1.9
HCG18-246ENST00000602591 OBSCNQ5VST9 7968 aa3.19□□□□□ -1.9
HCG18-246ENST00000602591 KRTAP5-10Q6L8G5 202 aa3.12□□□□□ -1.91
HCG18-246ENST00000602591 PRM1P04553 51 aa3.01□□□□□ -1.93
HCG18-246ENST00000602591 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
HCG18-246ENST00000602591 KRTAP5-7Q6L8G8 165 aa2.96□□□□□ -1.94
HCG18-246ENST00000602591 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
HCG18-246ENST00000602591 KRTAP5-8O75690 187 aa2.88□□□□□ -1.95
HCG18-246ENST00000602591 MUC5ACP98088 5654 aa2.81□□□□□ -1.96
HCG18-246ENST00000602591 LCE1BQ5T7P3 118 aa2.69□□□□□ -1.98
HCG18-246ENST00000602591 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
HCG18-246ENST00000602591 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
HCG18-246ENST00000602591 AHNAKQ09666 5890 aaKnown RBP2.62□□□□□ -1.99
HCG18-246ENST00000602591 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
HCG18-246ENST00000602591 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
HCG18-246ENST00000602591 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
HCG18-246ENST00000602591 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
HCG18-246ENST00000602591 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms