RNA–Protein interactions for RNA: ENST00000601772.1

DDX49-211, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 342 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-211ENST00000601772 LUZP6Q538Z0 58 aa3.74□□□□□ -1.81
DDX49-211ENST00000601772 TNP1P09430 55 aa3.71□□□□□ -1.82
DDX49-211ENST00000601772 KRTAP10-5P60370 271 aa3.67□□□□□ -1.82
DDX49-211ENST00000601772 LCE1AQ5T7P2 110 aa3.67□□□□□ -1.82
DDX49-211ENST00000601772 LCE3BQ5TA77 95 aa3.67□□□□□ -1.82
DDX49-211ENST00000601772 AHNAK2Q8IVF2 5795 aa3.65□□□□□ -1.83
DDX49-211ENST00000601772 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
DDX49-211ENST00000601772 KRTAP4-9Q9BYQ8 210 aa3.62□□□□□ -1.83
DDX49-211ENST00000601772 DSTQ03001 7570 aaKnown RBP3.61□□□□□ -1.83
DDX49-211ENST00000601772 SPRR5A0A1B0GTR4 108 aa3.59□□□□□ -1.83
DDX49-211ENST00000601772 HMCN1Q96RW7 5635 aa3.58□□□□□ -1.84
DDX49-211ENST00000601772 MT1XP80297 61 aa3.54□□□□□ -1.84
DDX49-211ENST00000601772 KRTAP8-1Q8IUC2 63 aa3.54□□□□□ -1.84
DDX49-211ENST00000601772 PRO2289Q9P1D8 64 aa3.53□□□□□ -1.84
DDX49-211ENST00000601772 KRTAP5-10Q6L8G5 202 aa3.47□□□□□ -1.85
DDX49-211ENST00000601772 LCE1DQ5T752 114 aa3.43□□□□□ -1.86
DDX49-211ENST00000601772 KRTAP5-7Q6L8G8 165 aa3.41□□□□□ -1.86
DDX49-211ENST00000601772 KRTAP4-8A0A0G2JLE6 195 aa3.39□□□□□ -1.87
DDX49-211ENST00000601772 KRTAP4-8Q9BYQ9 185 aa3.39□□□□□ -1.87
DDX49-211ENST00000601772 KRTAP10-7P60409 375 aaPredicted RBP3.38□□□□□ -1.87
DDX49-211ENST00000601772 KRTAP10-12P60413 245 aa3.37□□□□□ -1.87
DDX49-211ENST00000601772 MT4P47944 62 aa3.35□□□□□ -1.87
DDX49-211ENST00000601772 LCE3AQ5TA76 89 aa3.35□□□□□ -1.87
DDX49-211ENST00000601772 INE1O15225 51 aa3.33□□□□□ -1.88
DDX49-211ENST00000601772 KRTAP12-3P60328 96 aa3.26□□□□□ -1.89
DDX49-211ENST00000601772 KRTAP19-4Q3LI73 84 aa3.24□□□□□ -1.89
DDX49-211ENST00000601772 KRTAP5-3Q6L8H2 238 aa3.24□□□□□ -1.89
DDX49-211ENST00000601772 AHNAKQ09666 5890 aaKnown RBP3.22□□□□□ -1.89
DDX49-211ENST00000601772 LCE4AQ5TA78 99 aa3.2□□□□□ -1.9
DDX49-211ENST00000601772 KRTAP19-7Q3SYF9 63 aa3.16□□□□□ -1.9
DDX49-211ENST00000601772 KRTAP4-6Q9BYQ5 205 aa3.14□□□□□ -1.91
DDX49-211ENST00000601772 MT1EP04732 61 aa3.13□□□□□ -1.91
DDX49-211ENST00000601772 KRTAP19-5Q3LI72 72 aa3.09□□□□□ -1.91
DDX49-211ENST00000601772 LCE5AQ5TCM9 118 aa3.09□□□□□ -1.91
DDX49-211ENST00000601772 KRTAP19-3Q7Z4W3 81 aa3.09□□□□□ -1.91
DDX49-211ENST00000601772 LCE3CQ5T5A8 94 aa3.08□□□□□ -1.92
DDX49-211ENST00000601772 MUC5BQ9HC84 5762 aaPredicted RBP3.08□□□□□ -1.92
DDX49-211ENST00000601772 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
DDX49-211ENST00000601772 MT1GP13640 62 aa3.03□□□□□ -1.92
DDX49-211ENST00000601772 KRTAP5-4Q6L8H1 288 aa3□□□□□ -1.93
DDX49-211ENST00000601772 MT1LQ93083 61 aa3□□□□□ -1.93
DDX49-211ENST00000601772 MT1MQ8N339 61 aa2.98□□□□□ -1.93
DDX49-211ENST00000601772 KRTAP4-7Q9BYR0 210 aa2.93□□□□□ -1.94
DDX49-211ENST00000601772 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
DDX49-211ENST00000601772 KRTAP4-3Q9BYR4 195 aa2.92□□□□□ -1.94
DDX49-211ENST00000601772 KRTAP9-6A8MVA2 160 aa2.83□□□□□ -1.96
DDX49-211ENST00000601772 KRTAP4-11Q9BYQ6 195 aa2.82□□□□□ -1.96
DDX49-211ENST00000601772 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
DDX49-211ENST00000601772 KRTAP12-4P60329 112 aa2.74□□□□□ -1.97
DDX49-211ENST00000601772 KRTAP9-9Q9BYP9 154 aa2.74□□□□□ -1.97
DDX49-211ENST00000601772 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
DDX49-211ENST00000601772 LOC100996750A0A140TA64 210 aa2.71□□□□□ -1.98
DDX49-211ENST00000601772 SYNE1Q8NF91 8797 aaKnown RBP2.66□□□□□ -1.98
DDX49-211ENST00000601772 KRTAP5-2Q701N4 177 aa2.61□□□□□ -1.99
DDX49-211ENST00000601772 MT1AP04731 61 aa2.56□□□□□ -2
DDX49-211ENST00000601772 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
DDX49-211ENST00000601772 KRTAP6-1Q3LI64 71 aa2.54□□□□□ -2
DDX49-211ENST00000601772 KRTAP9-4Q9BYQ2 154 aa2.46□□□□□ -2.02
DDX49-211ENST00000601772 KRTAP6-2Q3LI66 62 aa2.41□□□□□ -2.02
DDX49-211ENST00000601772 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
DDX49-211ENST00000601772 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
DDX49-211ENST00000601772 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
DDX49-211ENST00000601772 MT3P25713 68 aa2.33□□□□□ -2.04
DDX49-211ENST00000601772 PRM1P04553 51 aa2.22□□□□□ -2.05
DDX49-211ENST00000601772 KRTAP4-2Q9BYR5 136 aa2.2□□□□□ -2.06
DDX49-211ENST00000601772 KRTAP4-12Q9BQ66 201 aa2.13□□□□□ -2.07
DDX49-211ENST00000601772 LCE1EQ5T753 118 aa2.12□□□□□ -2.07
DDX49-211ENST00000601772 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
DDX49-211ENST00000601772 LCE1BQ5T7P3 118 aa2.07□□□□□ -2.08
DDX49-211ENST00000601772 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
DDX49-211ENST00000601772 KRTAP5-11Q6L8G4 156 aa1.94□□□□□ -2.1
DDX49-211ENST00000601772 LCE1FQ5T754 118 aa1.85□□□□□ -2.11
DDX49-211ENST00000601772 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.8□□□□□ -2.12
DDX49-211ENST00000601772 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
DDX49-211ENST00000601772 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
DDX49-211ENST00000601772 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
DDX49-211ENST00000601772 KRTAP4-4Q9BYR3 166 aa1.55□□□□□ -2.16
DDX49-211ENST00000601772 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 135.2 ms