RNA–Protein interactions for RNA: ENST00000601253.5

SNRPA-209, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 519 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-209ENST00000601253 MDN1Q9NU22 5596 aa5.35□□□□□ -1.55
SNRPA-209ENST00000601253 PRAC1Q96KF2 57 aa5.3□□□□□ -1.56
SNRPA-209ENST00000601253 SPRR2EP22531 72 aa5.29□□□□□ -1.56
SNRPA-209ENST00000601253 SPRR2BP35325 72 aa5.29□□□□□ -1.56
SNRPA-209ENST00000601253 SPRR2AP35326 72 aa5.29□□□□□ -1.56
SNRPA-209ENST00000601253 C10orf95Q9H7T3 257 aa5.27□□□□□ -1.57
SNRPA-209ENST00000601253 LCE1AQ5T7P2 110 aa5.26□□□□□ -1.57
SNRPA-209ENST00000601253 TNP1P09430 55 aa5.24□□□□□ -1.57
SNRPA-209ENST00000601253 LCE4AQ5TA78 99 aa5.23□□□□□ -1.57
SNRPA-209ENST00000601253 KRTAP25-1Q3LHN0 102 aa5.21□□□□□ -1.58
SNRPA-209ENST00000601253 KRTAP20-1Q3LI63 56 aa5.18□□□□□ -1.58
SNRPA-209ENST00000601253 KRTAP19-7Q3SYF9 63 aa5.18□□□□□ -1.58
SNRPA-209ENST00000601253 ROMO1P60602 79 aa5.14□□□□□ -1.59
SNRPA-209ENST00000601253 MT1EP04732 61 aa5.12□□□□□ -1.59
SNRPA-209ENST00000601253 KRTAP2-3P0C7H8 128 aa5.12□□□□□ -1.59
SNRPA-209ENST00000601253 SPRR2DP22532 72 aa5.12□□□□□ -1.59
SNRPA-209ENST00000601253 KRTAP2-4Q9BYR9 128 aa5.12□□□□□ -1.59
SNRPA-209ENST00000601253 KRTAP19-5Q3LI72 72 aa5.1□□□□□ -1.59
SNRPA-209ENST00000601253 LCE3AQ5TA76 89 aa5.09□□□□□ -1.59
SNRPA-209ENST00000601253 KRTAP19-3Q7Z4W3 81 aa5.05□□□□□ -1.6
SNRPA-209ENST00000601253 LCE5AQ5TCM9 118 aa5.02□□□□□ -1.61
SNRPA-209ENST00000601253 KRTAP2-2Q9BYT5 123 aa4.97□□□□□ -1.61
SNRPA-209ENST00000601253 KRTAP2-1Q9BYU5 128 aa4.97□□□□□ -1.61
SNRPA-209ENST00000601253 MT1GP13640 62 aa4.95□□□□□ -1.62
SNRPA-209ENST00000601253 KRTAP12-3P60328 96 aa4.93□□□□□ -1.62
SNRPA-209ENST00000601253 PP632Q6XCG6 107 aa4.93□□□□□ -1.62
SNRPA-209ENST00000601253 MT1LQ93083 61 aa4.93□□□□□ -1.62
SNRPA-209ENST00000601253 KRTAP23-1A1A580 65 aa4.92□□□□□ -1.62
SNRPA-209ENST00000601253 MT1MQ8N339 61 aa4.86□□□□□ -1.63
SNRPA-209ENST00000601253 H3BS24 57 aa4.8□□□□□ -1.64
SNRPA-209ENST00000601253 DSTQ03001 7570 aaKnown RBP4.76□□□□□ -1.65
SNRPA-209ENST00000601253 KRTAP19-4Q3LI73 84 aa4.73□□□□□ -1.65
SNRPA-209ENST00000601253 KRTAP15-1Q3LI76 137 aa4.73□□□□□ -1.65
SNRPA-209ENST00000601253 KRTAP4-3Q9BYR4 195 aa4.7□□□□□ -1.66
SNRPA-209ENST00000601253 LCE3CQ5T5A8 94 aa4.56□□□□□ -1.68
SNRPA-209ENST00000601253 NDUFAF8A1L188 74 aa4.53□□□□□ -1.68
SNRPA-209ENST00000601253 KRTAP5-4Q6L8H1 288 aa4.51□□□□□ -1.69
SNRPA-209ENST00000601253 KRTAP5-5Q701N2 237 aaPredicted RBP4.45□□□□□ -1.7
SNRPA-209ENST00000601253 MT4P47944 62 aa4.43□□□□□ -1.7
SNRPA-209ENST00000601253 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
SNRPA-209ENST00000601253 HMCN1Q96RW7 5635 aa4.41□□□□□ -1.7
SNRPA-209ENST00000601253 KRTAP12-4P60329 112 aa4.29□□□□□ -1.72
SNRPA-209ENST00000601253 SPRR5A0A1B0GTR4 108 aa4.28□□□□□ -1.72
SNRPA-209ENST00000601253 A0A0A0MQY5 61 aa4.26□□□□□ -1.73
SNRPA-209ENST00000601253 KRTAP9-6A8MVA2 160 aa4.26□□□□□ -1.73
SNRPA-209ENST00000601253 GPR98Q8WXG9 6306 aa4.25□□□□□ -1.73
SNRPA-209ENST00000601253 KRTAP20-2Q3LI61 65 aa4.23□□□□□ -1.73
SNRPA-209ENST00000601253 MT1AP04731 61 aa4.21□□□□□ -1.74
SNRPA-209ENST00000601253 KRTAP6-1Q3LI64 71 aa4.15□□□□□ -1.75
SNRPA-209ENST00000601253 AHNAK2Q8IVF2 5795 aa4.14□□□□□ -1.75
SNRPA-209ENST00000601253 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
SNRPA-209ENST00000601253 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
SNRPA-209ENST00000601253 KRTAP5-10Q6L8G5 202 aa4.04□□□□□ -1.76
SNRPA-209ENST00000601253 KRTAP5-2Q701N4 177 aa4□□□□□ -1.77
SNRPA-209ENST00000601253 KRTAP6-2Q3LI66 62 aa3.93□□□□□ -1.78
SNRPA-209ENST00000601253 INE1O15225 51 aa3.92□□□□□ -1.78
SNRPA-209ENST00000601253 KRTAP5-7Q6L8G8 165 aa3.86□□□□□ -1.79
SNRPA-209ENST00000601253 MT3P25713 68 aa3.85□□□□□ -1.79
SNRPA-209ENST00000601253 KRTAP5-11Q6L8G4 156 aa3.78□□□□□ -1.8
SNRPA-209ENST00000601253 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
SNRPA-209ENST00000601253 OBSCNQ5VST9 7968 aa3.6□□□□□ -1.83
SNRPA-209ENST00000601253 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
SNRPA-209ENST00000601253 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
SNRPA-209ENST00000601253 MUC5ACP98088 5654 aa3.46□□□□□ -1.86
SNRPA-209ENST00000601253 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
SNRPA-209ENST00000601253 MUC5BQ9HC84 5762 aaPredicted RBP3.39□□□□□ -1.87
SNRPA-209ENST00000601253 AHNAKQ09666 5890 aaKnown RBP3.37□□□□□ -1.87
SNRPA-209ENST00000601253 LCE3DQ9BYE3 92 aa3.34□□□□□ -1.87
SNRPA-209ENST00000601253 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
SNRPA-209ENST00000601253 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
SNRPA-209ENST00000601253 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
SNRPA-209ENST00000601253 LCE1FQ5T754 118 aa2.79□□□□□ -1.96
SNRPA-209ENST00000601253 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
SNRPA-209ENST00000601253 PRM1P04553 51 aa2.65□□□□□ -1.99
SNRPA-209ENST00000601253 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
SNRPA-209ENST00000601253 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
SNRPA-209ENST00000601253 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
SNRPA-209ENST00000601253 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 81.9 ms