RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 SPRR2DP22532 72 aa4.57□□□□□ -1.68
CHMP2A-207ENST00000600804 KRTAP4-8A0A0G2JLE6 195 aa4.55□□□□□ -1.68
CHMP2A-207ENST00000600804 TNP1P09430 55 aa4.55□□□□□ -1.68
CHMP2A-207ENST00000600804 KRTAP4-8Q9BYQ9 185 aa4.55□□□□□ -1.68
CHMP2A-207ENST00000600804 BRK1Q8WUW1 75 aa4.51□□□□□ -1.69
CHMP2A-207ENST00000600804 KRTAP25-1Q3LHN0 102 aa4.49□□□□□ -1.69
CHMP2A-207ENST00000600804 LCE3BQ5TA77 95 aa4.49□□□□□ -1.69
CHMP2A-207ENST00000600804 GPR98Q8WXG9 6306 aa4.49□□□□□ -1.69
CHMP2A-207ENST00000600804 ROMO1P60602 79 aa4.46□□□□□ -1.7
CHMP2A-207ENST00000600804 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
CHMP2A-207ENST00000600804 LCE3AQ5TA76 89 aa4.38□□□□□ -1.71
CHMP2A-207ENST00000600804 DSTQ03001 7570 aaKnown RBP4.38□□□□□ -1.71
CHMP2A-207ENST00000600804 KRTAP19-7Q3SYF9 63 aa4.35□□□□□ -1.71
CHMP2A-207ENST00000600804 LCE4AQ5TA78 99 aa4.32□□□□□ -1.72
CHMP2A-207ENST00000600804 PRO0628Q9UI54 55 aa4.32□□□□□ -1.72
CHMP2A-207ENST00000600804 KRTAP4-12Q9BQ66 201 aa4.31□□□□□ -1.72
CHMP2A-207ENST00000600804 KRTAP4-9Q9BYQ8 210 aa4.31□□□□□ -1.72
CHMP2A-207ENST00000600804 KRTAP19-5Q3LI72 72 aa4.3□□□□□ -1.72
CHMP2A-207ENST00000600804 MT1EP04732 61 aa4.29□□□□□ -1.72
CHMP2A-207ENST00000600804 PP632Q6XCG6 107 aa4.29□□□□□ -1.72
CHMP2A-207ENST00000600804 KRTAP9-4Q9BYQ2 154 aa4.29□□□□□ -1.72
CHMP2A-207ENST00000600804 PMAIP1Q13794 54 aa4.28□□□□□ -1.72
CHMP2A-207ENST00000600804 KRTAP12-3P60328 96 aa4.24□□□□□ -1.73
CHMP2A-207ENST00000600804 KRTAP19-3Q7Z4W3 81 aa4.19□□□□□ -1.74
CHMP2A-207ENST00000600804 LCE5AQ5TCM9 118 aa4.18□□□□□ -1.74
CHMP2A-207ENST00000600804 HMCN1Q96RW7 5635 aa4.17□□□□□ -1.74
CHMP2A-207ENST00000600804 LCE1DQ5T752 114 aa4.16□□□□□ -1.74
CHMP2A-207ENST00000600804 KRTAP9-9Q9BYP9 154 aa4.16□□□□□ -1.74
CHMP2A-207ENST00000600804 MT1LQ93083 61 aa4.15□□□□□ -1.75
CHMP2A-207ENST00000600804 MT1GP13640 62 aa4.14□□□□□ -1.75
CHMP2A-207ENST00000600804 AHNAK2Q8IVF2 5795 aa4.14□□□□□ -1.75
CHMP2A-207ENST00000600804 NDUFAF8A1L188 74 aa4.11□□□□□ -1.75
CHMP2A-207ENST00000600804 MT4P47944 62 aa4.05□□□□□ -1.76
CHMP2A-207ENST00000600804 MT1MQ8N339 61 aa4.05□□□□□ -1.76
CHMP2A-207ENST00000600804 KRTAP5-10Q6L8G5 202 aa4.04□□□□□ -1.76
CHMP2A-207ENST00000600804 KTN1-AS1Q86SY8 53 aa4.03□□□□□ -1.76
CHMP2A-207ENST00000600804 KRTAP5-4Q6L8H1 288 aa3.95□□□□□ -1.78
CHMP2A-207ENST00000600804 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
CHMP2A-207ENST00000600804 KRTAP4-7Q9BYR0 210 aa3.91□□□□□ -1.78
CHMP2A-207ENST00000600804 KRTAP5-7Q6L8G8 165 aa3.9□□□□□ -1.79
CHMP2A-207ENST00000600804 KRTAP4-3Q9BYR4 195 aa3.9□□□□□ -1.79
CHMP2A-207ENST00000600804 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
CHMP2A-207ENST00000600804 MT3P25713 68 aa3.8□□□□□ -1.8
CHMP2A-207ENST00000600804 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
CHMP2A-207ENST00000600804 SPRR5A0A1B0GTR4 108 aa3.72□□□□□ -1.81
CHMP2A-207ENST00000600804 KRTAP5-5Q701N2 237 aaPredicted RBP3.72□□□□□ -1.81
CHMP2A-207ENST00000600804 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
CHMP2A-207ENST00000600804 SYNE1Q8NF91 8797 aaKnown RBP3.69□□□□□ -1.82
CHMP2A-207ENST00000600804 KRTAP4-11Q9BYQ6 195 aa3.63□□□□□ -1.83
CHMP2A-207ENST00000600804 KRTAP4-2Q9BYR5 136 aa3.59□□□□□ -1.83
CHMP2A-207ENST00000600804 KRTAP12-4P60329 112 aa3.57□□□□□ -1.84
CHMP2A-207ENST00000600804 MT1AP04731 61 aa3.55□□□□□ -1.84
CHMP2A-207ENST00000600804 KRTAP6-1Q3LI64 71 aa3.48□□□□□ -1.85
CHMP2A-207ENST00000600804 MUC5ACP98088 5654 aa3.46□□□□□ -1.86
CHMP2A-207ENST00000600804 AHNAKQ09666 5890 aaKnown RBP3.45□□□□□ -1.86
CHMP2A-207ENST00000600804 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
CHMP2A-207ENST00000600804 LUZP6Q538Z0 58 aa3.41□□□□□ -1.86
CHMP2A-207ENST00000600804 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
CHMP2A-207ENST00000600804 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
CHMP2A-207ENST00000600804 OBSCNQ5VST9 7968 aa3.31□□□□□ -1.88
CHMP2A-207ENST00000600804 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
CHMP2A-207ENST00000600804 KRTAP6-2Q3LI66 62 aa3.25□□□□□ -1.89
CHMP2A-207ENST00000600804 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
CHMP2A-207ENST00000600804 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
CHMP2A-207ENST00000600804 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
CHMP2A-207ENST00000600804 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
CHMP2A-207ENST00000600804 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
CHMP2A-207ENST00000600804 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
CHMP2A-207ENST00000600804 INE1O15225 51 aa2.56□□□□□ -2
CHMP2A-207ENST00000600804 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
CHMP2A-207ENST00000600804 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
CHMP2A-207ENST00000600804 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
CHMP2A-207ENST00000600804 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
CHMP2A-207ENST00000600804 PRM1P04553 51 aa2.27□□□□□ -2.05
CHMP2A-207ENST00000600804 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
CHMP2A-207ENST00000600804 KRTAP4-4Q9BYR3 166 aa2.06□□□□□ -2.08
CHMP2A-207ENST00000600804 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
CHMP2A-207ENST00000600804 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 71.5 ms