RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 LCE5AQ5TCM9 118 aa5.81□□□□□ -1.48
IRF3-226ENST00000600453 KRTAP19-3Q7Z4W3 81 aa5.8□□□□□ -1.48
IRF3-226ENST00000600453 MT1GP13640 62 aa5.71□□□□□ -1.5
IRF3-226ENST00000600453 KRTAP19-5Q3LI72 72 aa5.71□□□□□ -1.5
IRF3-226ENST00000600453 TNP1P09430 55 aa5.69□□□□□ -1.5
IRF3-226ENST00000600453 ROMO1P60602 79 aa5.69□□□□□ -1.5
IRF3-226ENST00000600453 PP632Q6XCG6 107 aa5.69□□□□□ -1.5
IRF3-226ENST00000600453 DSTQ03001 7570 aaKnown RBP5.68□□□□□ -1.5
IRF3-226ENST00000600453 KTN1-AS1Q86SY8 53 aa5.64□□□□□ -1.51
IRF3-226ENST00000600453 C10orf95Q9H7T3 257 aa5.62□□□□□ -1.51
IRF3-226ENST00000600453 LCE3AQ5TA76 89 aa5.57□□□□□ -1.52
IRF3-226ENST00000600453 MT1LQ93083 61 aa5.56□□□□□ -1.52
IRF3-226ENST00000600453 MT1MQ8N339 61 aa5.54□□□□□ -1.52
IRF3-226ENST00000600453 KRTAP25-1Q3LHN0 102 aa5.53□□□□□ -1.52
IRF3-226ENST00000600453 SVIPQ8NHG7 77 aa5.53□□□□□ -1.52
IRF3-226ENST00000600453 KRTAP4-9Q9BYQ8 210 aa5.51□□□□□ -1.53
IRF3-226ENST00000600453 LCE4AQ5TA78 99 aa5.46□□□□□ -1.54
IRF3-226ENST00000600453 KRTAP23-1A1A580 65 aa5.44□□□□□ -1.54
IRF3-226ENST00000600453 KRTAP12-3P60328 96 aa5.4□□□□□ -1.54
IRF3-226ENST00000600453 LCE1DQ5T752 114 aa5.39□□□□□ -1.55
IRF3-226ENST00000600453 PRAC1Q96KF2 57 aa5.35□□□□□ -1.55
IRF3-226ENST00000600453 KRTAP4-3Q9BYR4 195 aa5.35□□□□□ -1.55
IRF3-226ENST00000600453 MT4P47944 62 aa5.33□□□□□ -1.56
IRF3-226ENST00000600453 KRTAP5-4Q6L8H1 288 aa5.3□□□□□ -1.56
IRF3-226ENST00000600453 GPR98Q8WXG9 6306 aa5.28□□□□□ -1.56
IRF3-226ENST00000600453 KRTAP19-4Q3LI73 84 aa5.23□□□□□ -1.57
IRF3-226ENST00000600453 KRTAP4-7Q9BYR0 210 aa5.23□□□□□ -1.57
IRF3-226ENST00000600453 HMCN1Q96RW7 5635 aa5.21□□□□□ -1.58
IRF3-226ENST00000600453 KRTAP4-6Q9BYQ5 205 aa5.17□□□□□ -1.58
IRF3-226ENST00000600453 KRTAP15-1Q3LI76 137 aa5.06□□□□□ -1.6
IRF3-226ENST00000600453 KRTAP5-5Q701N2 237 aaPredicted RBP5.06□□□□□ -1.6
IRF3-226ENST00000600453 KRTAP12-4P60329 112 aa5.04□□□□□ -1.6
IRF3-226ENST00000600453 SPRR5A0A1B0GTR4 108 aa5.02□□□□□ -1.61
IRF3-226ENST00000600453 KRTAP5-10Q6L8G5 202 aa5.01□□□□□ -1.61
IRF3-226ENST00000600453 KRTAP20-2Q3LI61 65 aa5□□□□□ -1.61
IRF3-226ENST00000600453 AHNAK2Q8IVF2 5795 aa4.99□□□□□ -1.61
IRF3-226ENST00000600453 LCE3CQ5T5A8 94 aa4.98□□□□□ -1.61
IRF3-226ENST00000600453 LOC100996750A0A140TA64 210 aa4.96□□□□□ -1.62
IRF3-226ENST00000600453 KRTAP5-3Q6L8H2 238 aa4.92□□□□□ -1.62
IRF3-226ENST00000600453 SYNE1Q8NF91 8797 aaKnown RBP4.86□□□□□ -1.63
IRF3-226ENST00000600453 KRTAP5-7Q6L8G8 165 aa4.85□□□□□ -1.63
IRF3-226ENST00000600453 MT1AP04731 61 aa4.75□□□□□ -1.65
IRF3-226ENST00000600453 KRTAP6-1Q3LI64 71 aa4.68□□□□□ -1.66
IRF3-226ENST00000600453 KRTAP5-2Q701N4 177 aa4.62□□□□□ -1.67
IRF3-226ENST00000600453 KRTAP9-4Q9BYQ2 154 aa4.61□□□□□ -1.67
IRF3-226ENST00000600453 KRTAP9-6A8MVA2 160 aa4.6□□□□□ -1.67
IRF3-226ENST00000600453 LUZP6Q538Z0 58 aa4.59□□□□□ -1.67
IRF3-226ENST00000600453 KRTAP4-11Q9BYQ6 195 aa4.59□□□□□ -1.67
IRF3-226ENST00000600453 KRTAP6-2Q3LI66 62 aa4.49□□□□□ -1.69
IRF3-226ENST00000600453 KRTAP5-8O75690 187 aa4.41□□□□□ -1.7
IRF3-226ENST00000600453 MT3P25713 68 aa4.39□□□□□ -1.71
IRF3-226ENST00000600453 OBSCNQ5VST9 7968 aa4.31□□□□□ -1.72
IRF3-226ENST00000600453 NDUFAF8A1L188 74 aa4.3□□□□□ -1.72
IRF3-226ENST00000600453 KRTAP9-9Q9BYP9 154 aa4.25□□□□□ -1.73
IRF3-226ENST00000600453 KRTAP5-1Q6L8H4 278 aa4.15□□□□□ -1.75
IRF3-226ENST00000600453 MUC5BQ9HC84 5762 aaPredicted RBP4.12□□□□□ -1.75
IRF3-226ENST00000600453 MUC5ACP98088 5654 aa4.12□□□□□ -1.75
IRF3-226ENST00000600453 AHNAKQ09666 5890 aaKnown RBP4.1□□□□□ -1.75
IRF3-226ENST00000600453 LCE1EQ5T753 118 aa4.04□□□□□ -1.76
IRF3-226ENST00000600453 A0A0A0MQY5 61 aa3.94□□□□□ -1.78
IRF3-226ENST00000600453 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
IRF3-226ENST00000600453 KRTAP4-2Q9BYR5 136 aa3.74□□□□□ -1.81
IRF3-226ENST00000600453 INE1O15225 51 aa3.73□□□□□ -1.81
IRF3-226ENST00000600453 LCE1CQ5T751 118 aa3.73□□□□□ -1.81
IRF3-226ENST00000600453 H3BS24 57 aa3.7□□□□□ -1.82
IRF3-226ENST00000600453 LCE3DQ9BYE3 92 aa3.6□□□□□ -1.83
IRF3-226ENST00000600453 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
IRF3-226ENST00000600453 KRTAP4-12Q9BQ66 201 aa3.39□□□□□ -1.87
IRF3-226ENST00000600453 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.38□□□□□ -1.87
IRF3-226ENST00000600453 KRTAP5-11Q6L8G4 156 aa3.36□□□□□ -1.87
IRF3-226ENST00000600453 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
IRF3-226ENST00000600453 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.91
IRF3-226ENST00000600453 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
IRF3-226ENST00000600453 PRM1P04553 51 aa2.89□□□□□ -1.95
IRF3-226ENST00000600453 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
IRF3-226ENST00000600453 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
IRF3-226ENST00000600453 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
IRF3-226ENST00000600453 MUC16Q8WXI7 14507 aa1.88□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms