RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 LCE3AQ5TA76 89 aa7.07□□□□□ -1.28
CCDC9-205ENST00000600117 KRTAP19-7Q3SYF9 63 aa7.06□□□□□ -1.28
CCDC9-205ENST00000600117 BRK1Q8WUW1 75 aa7.01□□□□□ -1.29
CCDC9-205ENST00000600117 KRTAP19-5Q3LI72 72 aa7□□□□□ -1.29
CCDC9-205ENST00000600117 KRTAP4-9Q9BYQ8 210 aa7□□□□□ -1.29
CCDC9-205ENST00000600117 ROMO1P60602 79 aa6.98□□□□□ -1.29
CCDC9-205ENST00000600117 MT1EP04732 61 aa6.97□□□□□ -1.29
CCDC9-205ENST00000600117 HMCN1Q96RW7 5635 aa6.92□□□□□ -1.3
CCDC9-205ENST00000600117 AHNAK2Q8IVF2 5795 aa6.86□□□□□ -1.31
CCDC9-205ENST00000600117 KRTAP23-1A1A580 65 aa6.83□□□□□ -1.32
CCDC9-205ENST00000600117 KRTAP12-3P60328 96 aa6.79□□□□□ -1.32
CCDC9-205ENST00000600117 KRTAP19-3Q7Z4W3 81 aa6.79□□□□□ -1.32
CCDC9-205ENST00000600117 LCE1DQ5T752 114 aa6.78□□□□□ -1.32
CCDC9-205ENST00000600117 PRO0628Q9UI54 55 aa6.78□□□□□ -1.32
CCDC9-205ENST00000600117 LCE5AQ5TCM9 118 aa6.76□□□□□ -1.33
CCDC9-205ENST00000600117 MT1LQ93083 61 aa6.74□□□□□ -1.33
CCDC9-205ENST00000600117 MT1GP13640 62 aa6.67□□□□□ -1.34
CCDC9-205ENST00000600117 PP632Q6XCG6 107 aa6.66□□□□□ -1.34
CCDC9-205ENST00000600117 PMAIP1Q13794 54 aa6.65□□□□□ -1.34
CCDC9-205ENST00000600117 KRTAP5-10Q6L8G5 202 aa6.64□□□□□ -1.35
CCDC9-205ENST00000600117 MT4P47944 62 aa6.6□□□□□ -1.35
CCDC9-205ENST00000600117 LCE4AQ5TA78 99 aa6.59□□□□□ -1.35
CCDC9-205ENST00000600117 MT1MQ8N339 61 aa6.59□□□□□ -1.35
CCDC9-205ENST00000600117 KRTAP15-1Q3LI76 137 aa6.51□□□□□ -1.37
CCDC9-205ENST00000600117 KRTAP5-7Q6L8G8 165 aa6.48□□□□□ -1.37
CCDC9-205ENST00000600117 KRTAP4-7Q9BYR0 210 aa6.44□□□□□ -1.38
CCDC9-205ENST00000600117 KRTAP4-3Q9BYR4 195 aa6.44□□□□□ -1.38
CCDC9-205ENST00000600117 KRTAP19-4Q3LI73 84 aa6.41□□□□□ -1.38
CCDC9-205ENST00000600117 KRTAP5-4Q6L8H1 288 aa6.36□□□□□ -1.39
CCDC9-205ENST00000600117 KRTAP4-6Q9BYQ5 205 aa6.35□□□□□ -1.39
CCDC9-205ENST00000600117 KRTAP5-3Q6L8H2 238 aa6.33□□□□□ -1.4
CCDC9-205ENST00000600117 KTN1-AS1Q86SY8 53 aa6.31□□□□□ -1.4
CCDC9-205ENST00000600117 LCE3CQ5T5A8 94 aa6.3□□□□□ -1.4
CCDC9-205ENST00000600117 PRAC1Q96KF2 57 aa6.27□□□□□ -1.41
CCDC9-205ENST00000600117 SPRR5A0A1B0GTR4 108 aa6.22□□□□□ -1.41
CCDC9-205ENST00000600117 LOC100996750A0A140TA64 210 aa6.07□□□□□ -1.44
CCDC9-205ENST00000600117 KRTAP20-2Q3LI61 65 aa6.04□□□□□ -1.44
CCDC9-205ENST00000600117 KRTAP5-5Q701N2 237 aaPredicted RBP6.02□□□□□ -1.45
CCDC9-205ENST00000600117 KRTAP9-6A8MVA2 160 aa5.98□□□□□ -1.45
CCDC9-205ENST00000600117 SVIPQ8NHG7 77 aa5.95□□□□□ -1.46
CCDC9-205ENST00000600117 AHNAKQ09666 5890 aaKnown RBP5.9□□□□□ -1.46
CCDC9-205ENST00000600117 KRTAP12-4P60329 112 aa5.82□□□□□ -1.48
CCDC9-205ENST00000600117 SYNE1Q8NF91 8797 aaKnown RBP5.82□□□□□ -1.48
CCDC9-205ENST00000600117 MUC5BQ9HC84 5762 aaPredicted RBP5.77□□□□□ -1.49
CCDC9-205ENST00000600117 MUC5ACP98088 5654 aa5.76□□□□□ -1.49
CCDC9-205ENST00000600117 MT1AP04731 61 aa5.74□□□□□ -1.49
CCDC9-205ENST00000600117 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
CCDC9-205ENST00000600117 KRTAP4-11Q9BYQ6 195 aa5.68□□□□□ -1.5
CCDC9-205ENST00000600117 KRTAP5-8O75690 187 aa5.51□□□□□ -1.53
CCDC9-205ENST00000600117 KRTAP9-4Q9BYQ2 154 aa5.48□□□□□ -1.53
CCDC9-205ENST00000600117 OBSCNQ5VST9 7968 aa5.45□□□□□ -1.54
CCDC9-205ENST00000600117 KRTAP5-2Q701N4 177 aa5.45□□□□□ -1.54
CCDC9-205ENST00000600117 KRTAP9-9Q9BYP9 154 aa5.34□□□□□ -1.55
CCDC9-205ENST00000600117 KRTAP6-2Q3LI66 62 aa5.32□□□□□ -1.56
CCDC9-205ENST00000600117 MT3P25713 68 aa5.2□□□□□ -1.58
CCDC9-205ENST00000600117 LUZP6Q538Z0 58 aa5.15□□□□□ -1.59
CCDC9-205ENST00000600117 KRTAP5-1Q6L8H4 278 aa5.01□□□□□ -1.61
CCDC9-205ENST00000600117 H3BS24 57 aa4.87□□□□□ -1.63
CCDC9-205ENST00000600117 NDUFAF8A1L188 74 aa4.84□□□□□ -1.63
CCDC9-205ENST00000600117 LCE1EQ5T753 118 aa4.67□□□□□ -1.66
CCDC9-205ENST00000600117 LCE3DQ9BYE3 92 aa4.62□□□□□ -1.67
CCDC9-205ENST00000600117 LCE3EQ5T5B0 92 aa4.43□□□□□ -1.7
CCDC9-205ENST00000600117 KRTAP4-2Q9BYR5 136 aa4.4□□□□□ -1.71
CCDC9-205ENST00000600117 LCE1BQ5T7P3 118 aa4.35□□□□□ -1.71
CCDC9-205ENST00000600117 LCE1CQ5T751 118 aa4.34□□□□□ -1.71
CCDC9-205ENST00000600117 A0A0A0MQY5 61 aa4.27□□□□□ -1.73
CCDC9-205ENST00000600117 KRTAP4-12Q9BQ66 201 aa4.18□□□□□ -1.74
CCDC9-205ENST00000600117 INE1O15225 51 aa4.05□□□□□ -1.76
CCDC9-205ENST00000600117 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.02□□□□□ -1.77
CCDC9-205ENST00000600117 KRTAP5-11Q6L8G4 156 aa4.01□□□□□ -1.77
CCDC9-205ENST00000600117 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
CCDC9-205ENST00000600117 PHGR1C9JFL3 82 aa3.89□□□□□ -1.79
CCDC9-205ENST00000600117 KRTAP21-2Q3LI59 83 aa3.75□□□□□ -1.81
CCDC9-205ENST00000600117 PRM1P04553 51 aa3.6□□□□□ -1.83
CCDC9-205ENST00000600117 MUC19Q7Z5P9 8384 aa3.41□□□□□ -1.86
CCDC9-205ENST00000600117 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.87
CCDC9-205ENST00000600117 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
CCDC9-205ENST00000600117 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 76.5 ms