RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 LCE3AQ5TA76 89 aa4.82□□□□□ -1.64
SH2D3A-208ENST00000599563 ROMO1P60602 79 aa4.79□□□□□ -1.64
SH2D3A-208ENST00000599563 KRTAP25-1Q3LHN0 102 aa4.77□□□□□ -1.65
SH2D3A-208ENST00000599563 KRTAP19-7Q3SYF9 63 aa4.77□□□□□ -1.65
SH2D3A-208ENST00000599563 SVIPQ8NHG7 77 aa4.77□□□□□ -1.65
SH2D3A-208ENST00000599563 MT1EP04732 61 aa4.74□□□□□ -1.65
SH2D3A-208ENST00000599563 LCE5AQ5TCM9 118 aa4.73□□□□□ -1.65
SH2D3A-208ENST00000599563 KRTAP19-3Q7Z4W3 81 aa4.73□□□□□ -1.65
SH2D3A-208ENST00000599563 KRTAP19-5Q3LI72 72 aa4.72□□□□□ -1.65
SH2D3A-208ENST00000599563 KTN1-AS1Q86SY8 53 aa4.72□□□□□ -1.65
SH2D3A-208ENST00000599563 DSTQ03001 7570 aaKnown RBP4.65□□□□□ -1.66
SH2D3A-208ENST00000599563 PP632Q6XCG6 107 aa4.65□□□□□ -1.67
SH2D3A-208ENST00000599563 MT1GP13640 62 aa4.64□□□□□ -1.67
SH2D3A-208ENST00000599563 PRAC1Q96KF2 57 aa4.6□□□□□ -1.67
SH2D3A-208ENST00000599563 KRTAP23-1A1A580 65 aa4.58□□□□□ -1.68
SH2D3A-208ENST00000599563 KRTAP12-3P60328 96 aa4.58□□□□□ -1.68
SH2D3A-208ENST00000599563 MT1LQ93083 61 aa4.53□□□□□ -1.68
SH2D3A-208ENST00000599563 MT1MQ8N339 61 aa4.52□□□□□ -1.69
SH2D3A-208ENST00000599563 GPR98Q8WXG9 6306 aa4.46□□□□□ -1.7
SH2D3A-208ENST00000599563 LCE4AQ5TA78 99 aa4.45□□□□□ -1.7
SH2D3A-208ENST00000599563 KRTAP4-9Q9BYQ8 210 aa4.45□□□□□ -1.7
SH2D3A-208ENST00000599563 KRTAP15-1Q3LI76 137 aa4.4□□□□□ -1.71
SH2D3A-208ENST00000599563 LCE1DQ5T752 114 aa4.39□□□□□ -1.71
SH2D3A-208ENST00000599563 KRTAP4-7Q9BYR0 210 aa4.38□□□□□ -1.71
SH2D3A-208ENST00000599563 KRTAP4-3Q9BYR4 195 aa4.37□□□□□ -1.71
SH2D3A-208ENST00000599563 MT4P47944 62 aa4.33□□□□□ -1.72
SH2D3A-208ENST00000599563 KRTAP5-4Q6L8H1 288 aa4.32□□□□□ -1.72
SH2D3A-208ENST00000599563 HMCN1Q96RW7 5635 aa4.3□□□□□ -1.72
SH2D3A-208ENST00000599563 KRTAP19-4Q3LI73 84 aa4.28□□□□□ -1.72
SH2D3A-208ENST00000599563 LCE3CQ5T5A8 94 aa4.25□□□□□ -1.73
SH2D3A-208ENST00000599563 KRTAP4-6Q9BYQ5 205 aa4.19□□□□□ -1.74
SH2D3A-208ENST00000599563 KRTAP5-5Q701N2 237 aaPredicted RBP4.14□□□□□ -1.75
SH2D3A-208ENST00000599563 AHNAK2Q8IVF2 5795 aa4.14□□□□□ -1.75
SH2D3A-208ENST00000599563 LOC100996750A0A140TA64 210 aa4.13□□□□□ -1.75
SH2D3A-208ENST00000599563 SPRR5A0A1B0GTR4 108 aa4.1□□□□□ -1.75
SH2D3A-208ENST00000599563 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
SH2D3A-208ENST00000599563 KRTAP9-6A8MVA2 160 aa4.08□□□□□ -1.76
SH2D3A-208ENST00000599563 KRTAP5-10Q6L8G5 202 aa4.08□□□□□ -1.76
SH2D3A-208ENST00000599563 KRTAP20-2Q3LI61 65 aa4.07□□□□□ -1.76
SH2D3A-208ENST00000599563 KRTAP5-3Q6L8H2 238 aa4□□□□□ -1.77
SH2D3A-208ENST00000599563 KRTAP5-7Q6L8G8 165 aa3.95□□□□□ -1.78
SH2D3A-208ENST00000599563 SYNE1Q8NF91 8797 aaKnown RBP3.91□□□□□ -1.78
SH2D3A-208ENST00000599563 MT1AP04731 61 aa3.88□□□□□ -1.79
SH2D3A-208ENST00000599563 KRTAP6-1Q3LI64 71 aa3.84□□□□□ -1.79
SH2D3A-208ENST00000599563 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.8
SH2D3A-208ENST00000599563 LUZP6Q538Z0 58 aa3.74□□□□□ -1.81
SH2D3A-208ENST00000599563 KRTAP9-4Q9BYQ2 154 aa3.74□□□□□ -1.81
SH2D3A-208ENST00000599563 KRTAP4-11Q9BYQ6 195 aa3.73□□□□□ -1.81
SH2D3A-208ENST00000599563 NDUFAF8A1L188 74 aa3.68□□□□□ -1.82
SH2D3A-208ENST00000599563 KRTAP6-2Q3LI66 62 aa3.66□□□□□ -1.82
SH2D3A-208ENST00000599563 KRTAP5-8O75690 187 aa3.58□□□□□ -1.84
SH2D3A-208ENST00000599563 MT3P25713 68 aa3.58□□□□□ -1.84
SH2D3A-208ENST00000599563 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
SH2D3A-208ENST00000599563 AHNAKQ09666 5890 aaKnown RBP3.45□□□□□ -1.86
SH2D3A-208ENST00000599563 KRTAP9-9Q9BYP9 154 aa3.45□□□□□ -1.86
SH2D3A-208ENST00000599563 MUC5ACP98088 5654 aa3.43□□□□□ -1.86
SH2D3A-208ENST00000599563 MUC5BQ9HC84 5762 aaPredicted RBP3.42□□□□□ -1.86
SH2D3A-208ENST00000599563 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
SH2D3A-208ENST00000599563 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
SH2D3A-208ENST00000599563 H3BS24 57 aa3.26□□□□□ -1.89
SH2D3A-208ENST00000599563 A0A0A0MQY5 61 aa3.25□□□□□ -1.89
SH2D3A-208ENST00000599563 LCE3DQ9BYE3 92 aa3.12□□□□□ -1.91
SH2D3A-208ENST00000599563 KRTAP4-2Q9BYR5 136 aa3.06□□□□□ -1.92
SH2D3A-208ENST00000599563 INE1O15225 51 aa3.05□□□□□ -1.92
SH2D3A-208ENST00000599563 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
SH2D3A-208ENST00000599563 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
SH2D3A-208ENST00000599563 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
SH2D3A-208ENST00000599563 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.77□□□□□ -1.97
SH2D3A-208ENST00000599563 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
SH2D3A-208ENST00000599563 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
SH2D3A-208ENST00000599563 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
SH2D3A-208ENST00000599563 PRM1P04553 51 aa2.52□□□□□ -2.01
SH2D3A-208ENST00000599563 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
SH2D3A-208ENST00000599563 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
SH2D3A-208ENST00000599563 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
SH2D3A-208ENST00000599563 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
SH2D3A-208ENST00000599563 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
SH2D3A-208ENST00000599563 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 36.9 ms