RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 KRTAP4-9Q9BYQ8 210 aa6.42□□□□□ -1.38
HOMER3-210ENST00000599097 MT1GP13640 62 aa6.39□□□□□ -1.39
HOMER3-210ENST00000599097 K7ERS5 55 aa6.38□□□□□ -1.39
HOMER3-210ENST00000599097 KRTAP19-5Q3LI72 72 aa6.31□□□□□ -1.4
HOMER3-210ENST00000599097 LCE4AQ5TA78 99 aa6.31□□□□□ -1.4
HOMER3-210ENST00000599097 CDC42SE1Q9NRR8 79 aa6.3□□□□□ -1.4
HOMER3-210ENST00000599097 LCE1DQ5T752 114 aa6.29□□□□□ -1.4
HOMER3-210ENST00000599097 MT1MQ8N339 61 aa6.22□□□□□ -1.41
HOMER3-210ENST00000599097 MT4P47944 62 aa6.19□□□□□ -1.42
HOMER3-210ENST00000599097 HMCN1Q96RW7 5635 aa6.18□□□□□ -1.42
HOMER3-210ENST00000599097 MT1LQ93083 61 aa6.18□□□□□ -1.42
HOMER3-210ENST00000599097 TNP1P09430 55 aa6.14□□□□□ -1.43
HOMER3-210ENST00000599097 C10orf95Q9H7T3 257 aa6.1□□□□□ -1.43
HOMER3-210ENST00000599097 KRTAP5-4Q6L8H1 288 aa6.07□□□□□ -1.44
HOMER3-210ENST00000599097 LCE3AQ5TA76 89 aa6.06□□□□□ -1.44
HOMER3-210ENST00000599097 BRK1Q8WUW1 75 aa6.05□□□□□ -1.44
HOMER3-210ENST00000599097 AHNAK2Q8IVF2 5795 aa6.01□□□□□ -1.45
HOMER3-210ENST00000599097 KRTAP25-1Q3LHN0 102 aa6.01□□□□□ -1.45
HOMER3-210ENST00000599097 KRTAP5-10Q6L8G5 202 aa5.97□□□□□ -1.45
HOMER3-210ENST00000599097 KRTAP4-3Q9BYR4 195 aa5.97□□□□□ -1.45
HOMER3-210ENST00000599097 ROMO1P60602 79 aa5.96□□□□□ -1.46
HOMER3-210ENST00000599097 KRTAP4-6Q9BYQ5 205 aa5.93□□□□□ -1.46
HOMER3-210ENST00000599097 KRTAP12-3P60328 96 aa5.89□□□□□ -1.47
HOMER3-210ENST00000599097 KRTAP23-1A1A580 65 aa5.85□□□□□ -1.47
HOMER3-210ENST00000599097 KRTAP5-7Q6L8G8 165 aa5.81□□□□□ -1.48
HOMER3-210ENST00000599097 KRTAP5-3Q6L8H2 238 aa5.79□□□□□ -1.48
HOMER3-210ENST00000599097 SPRR5A0A1B0GTR4 108 aa5.77□□□□□ -1.49
HOMER3-210ENST00000599097 PRO0628Q9UI54 55 aa5.76□□□□□ -1.49
HOMER3-210ENST00000599097 KRTAP12-4P60329 112 aa5.75□□□□□ -1.49
HOMER3-210ENST00000599097 KRTAP20-2Q3LI61 65 aa5.75□□□□□ -1.49
HOMER3-210ENST00000599097 KRTAP4-7Q9BYR0 210 aa5.75□□□□□ -1.49
HOMER3-210ENST00000599097 PMAIP1Q13794 54 aa5.73□□□□□ -1.49
HOMER3-210ENST00000599097 KRTAP19-4Q3LI73 84 aa5.7□□□□□ -1.5
HOMER3-210ENST00000599097 KRTAP5-5Q701N2 237 aaPredicted RBP5.7□□□□□ -1.5
HOMER3-210ENST00000599097 LOC100996750A0A140TA64 210 aa5.47□□□□□ -1.53
HOMER3-210ENST00000599097 KRTAP15-1Q3LI76 137 aa5.45□□□□□ -1.54
HOMER3-210ENST00000599097 KTN1-AS1Q86SY8 53 aa5.4□□□□□ -1.54
HOMER3-210ENST00000599097 SYNE1Q8NF91 8797 aaKnown RBP5.39□□□□□ -1.55
HOMER3-210ENST00000599097 LCE3CQ5T5A8 94 aa5.38□□□□□ -1.55
HOMER3-210ENST00000599097 KRTAP4-11Q9BYQ6 195 aa5.33□□□□□ -1.56
HOMER3-210ENST00000599097 PRAC1Q96KF2 57 aa5.31□□□□□ -1.56
HOMER3-210ENST00000599097 MT1AP04731 61 aa5.29□□□□□ -1.56
HOMER3-210ENST00000599097 KRTAP5-2Q701N4 177 aa5.27□□□□□ -1.57
HOMER3-210ENST00000599097 KRTAP6-1Q3LI64 71 aa5.2□□□□□ -1.58
HOMER3-210ENST00000599097 KRTAP5-8O75690 187 aa5.11□□□□□ -1.59
HOMER3-210ENST00000599097 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
HOMER3-210ENST00000599097 AHNAKQ09666 5890 aaKnown RBP5.09□□□□□ -1.59
HOMER3-210ENST00000599097 SVIPQ8NHG7 77 aa5.08□□□□□ -1.6
HOMER3-210ENST00000599097 MUC5ACP98088 5654 aa5.06□□□□□ -1.6
HOMER3-210ENST00000599097 KRTAP6-2Q3LI66 62 aa5.04□□□□□ -1.6
HOMER3-210ENST00000599097 MUC5BQ9HC84 5762 aaPredicted RBP5.01□□□□□ -1.61
HOMER3-210ENST00000599097 KRTAP9-9Q9BYP9 154 aa5□□□□□ -1.61
HOMER3-210ENST00000599097 KRTAP9-6A8MVA2 160 aa4.96□□□□□ -1.62
HOMER3-210ENST00000599097 OBSCNQ5VST9 7968 aa4.92□□□□□ -1.62
HOMER3-210ENST00000599097 MT3P25713 68 aa4.9□□□□□ -1.63
HOMER3-210ENST00000599097 KRTAP5-1Q6L8H4 278 aa4.75□□□□□ -1.65
HOMER3-210ENST00000599097 LUZP6Q538Z0 58 aa4.57□□□□□ -1.68
HOMER3-210ENST00000599097 LCE1EQ5T753 118 aa4.56□□□□□ -1.68
HOMER3-210ENST00000599097 LCE1BQ5T7P3 118 aa4.25□□□□□ -1.73
HOMER3-210ENST00000599097 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
HOMER3-210ENST00000599097 LCE1CQ5T751 118 aa4.21□□□□□ -1.74
HOMER3-210ENST00000599097 NDUFAF8A1L188 74 aa4.05□□□□□ -1.76
HOMER3-210ENST00000599097 LCE3DQ9BYE3 92 aa3.89□□□□□ -1.79
HOMER3-210ENST00000599097 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
HOMER3-210ENST00000599097 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
HOMER3-210ENST00000599097 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.79
HOMER3-210ENST00000599097 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
HOMER3-210ENST00000599097 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
HOMER3-210ENST00000599097 A0A0A0MQY5 61 aa3.58□□□□□ -1.84
HOMER3-210ENST00000599097 PHGR1C9JFL3 82 aa3.53□□□□□ -1.84
HOMER3-210ENST00000599097 INE1O15225 51 aa3.45□□□□□ -1.86
HOMER3-210ENST00000599097 KRTAP21-2Q3LI59 83 aa3.43□□□□□ -1.86
HOMER3-210ENST00000599097 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
HOMER3-210ENST00000599097 MUC19Q7Z5P9 8384 aa3.04□□□□□ -1.92
HOMER3-210ENST00000599097 PRM1P04553 51 aa3.03□□□□□ -1.92
HOMER3-210ENST00000599097 H3BS24 57 aa2.84□□□□□ -1.95
HOMER3-210ENST00000599097 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
HOMER3-210ENST00000599097 MUC16Q8WXI7 14507 aa2.16□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 9 ms