RNA–Protein interactions for RNA: ENST00000597390.5

PRKD2-208, Transcript of protein kinase D2, humanhuman

TSL 1 (best)

Gene PRKD2, Length 1,367 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-208ENST00000597390 ROMO1P60602 79 aa5.19□□□□□ -1.58
PRKD2-208ENST00000597390 LCE3BQ5TA77 95 aa5.19□□□□□ -1.58
PRKD2-208ENST00000597390 LCE3AQ5TA76 89 aa5.16□□□□□ -1.58
PRKD2-208ENST00000597390 DSTQ03001 7570 aaKnown RBP5.12□□□□□ -1.59
PRKD2-208ENST00000597390 KRTAP19-7Q3SYF9 63 aa5.11□□□□□ -1.59
PRKD2-208ENST00000597390 KRTAP19-5Q3LI72 72 aa5.06□□□□□ -1.6
PRKD2-208ENST00000597390 KRTAP4-9Q9BYQ8 210 aa5.06□□□□□ -1.6
PRKD2-208ENST00000597390 KRTAP23-1A1A580 65 aa5.04□□□□□ -1.6
PRKD2-208ENST00000597390 MT1EP04732 61 aa5.03□□□□□ -1.6
PRKD2-208ENST00000597390 PRO0628Q9UI54 55 aa5.03□□□□□ -1.6
PRKD2-208ENST00000597390 PMAIP1Q13794 54 aa5.01□□□□□ -1.61
PRKD2-208ENST00000597390 KRTAP12-3P60328 96 aa4.95□□□□□ -1.62
PRKD2-208ENST00000597390 LCE5AQ5TCM9 118 aa4.93□□□□□ -1.62
PRKD2-208ENST00000597390 PP632Q6XCG6 107 aa4.92□□□□□ -1.62
PRKD2-208ENST00000597390 KRTAP19-3Q7Z4W3 81 aa4.91□□□□□ -1.62
PRKD2-208ENST00000597390 MT1LQ93083 61 aa4.88□□□□□ -1.63
PRKD2-208ENST00000597390 HMCN1Q96RW7 5635 aa4.86□□□□□ -1.63
PRKD2-208ENST00000597390 AHNAK2Q8IVF2 5795 aa4.85□□□□□ -1.63
PRKD2-208ENST00000597390 MT1GP13640 62 aa4.84□□□□□ -1.63
PRKD2-208ENST00000597390 LCE1DQ5T752 114 aa4.83□□□□□ -1.64
PRKD2-208ENST00000597390 KRTAP5-10Q6L8G5 202 aa4.83□□□□□ -1.64
PRKD2-208ENST00000597390 KRTAP15-1Q3LI76 137 aa4.77□□□□□ -1.65
PRKD2-208ENST00000597390 MT1MQ8N339 61 aa4.75□□□□□ -1.65
PRKD2-208ENST00000597390 KRTAP5-7Q6L8G8 165 aa4.74□□□□□ -1.65
PRKD2-208ENST00000597390 PRAC1Q96KF2 57 aa4.74□□□□□ -1.65
PRKD2-208ENST00000597390 MT4P47944 62 aa4.69□□□□□ -1.66
PRKD2-208ENST00000597390 KTN1-AS1Q86SY8 53 aa4.69□□□□□ -1.66
PRKD2-208ENST00000597390 KRTAP19-4Q3LI73 84 aa4.67□□□□□ -1.66
PRKD2-208ENST00000597390 KRTAP4-7Q9BYR0 210 aa4.67□□□□□ -1.66
PRKD2-208ENST00000597390 SPRR5A0A1B0GTR4 108 aa4.65□□□□□ -1.66
PRKD2-208ENST00000597390 KRTAP4-3Q9BYR4 195 aa4.65□□□□□ -1.67
PRKD2-208ENST00000597390 LCE3CQ5T5A8 94 aa4.62□□□□□ -1.67
PRKD2-208ENST00000597390 LCE4AQ5TA78 99 aa4.61□□□□□ -1.67
PRKD2-208ENST00000597390 KRTAP5-3Q6L8H2 238 aa4.56□□□□□ -1.68
PRKD2-208ENST00000597390 KRTAP5-4Q6L8H1 288 aa4.52□□□□□ -1.69
PRKD2-208ENST00000597390 KRTAP4-6Q9BYQ5 205 aa4.5□□□□□ -1.69
PRKD2-208ENST00000597390 LOC100996750A0A140TA64 210 aa4.4□□□□□ -1.7
PRKD2-208ENST00000597390 H3BS24 57 aa4.4□□□□□ -1.71
PRKD2-208ENST00000597390 KRTAP9-6A8MVA2 160 aa4.39□□□□□ -1.71
PRKD2-208ENST00000597390 KRTAP5-5Q701N2 237 aaPredicted RBP4.35□□□□□ -1.71
PRKD2-208ENST00000597390 AHNAKQ09666 5890 aaKnown RBP4.33□□□□□ -1.72
PRKD2-208ENST00000597390 KRTAP20-2Q3LI61 65 aa4.26□□□□□ -1.73
PRKD2-208ENST00000597390 SYNE1Q8NF91 8797 aaKnown RBP4.25□□□□□ -1.73
PRKD2-208ENST00000597390 KRTAP12-4P60329 112 aa4.22□□□□□ -1.73
PRKD2-208ENST00000597390 MUC5BQ9HC84 5762 aaPredicted RBP4.16□□□□□ -1.74
PRKD2-208ENST00000597390 MUC5ACP98088 5654 aa4.15□□□□□ -1.75
PRKD2-208ENST00000597390 MT1AP04731 61 aa4.14□□□□□ -1.75
PRKD2-208ENST00000597390 KRTAP6-1Q3LI64 71 aa4.11□□□□□ -1.75
PRKD2-208ENST00000597390 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
PRKD2-208ENST00000597390 KRTAP4-11Q9BYQ6 195 aa4.02□□□□□ -1.77
PRKD2-208ENST00000597390 KRTAP9-4Q9BYQ2 154 aa3.97□□□□□ -1.77
PRKD2-208ENST00000597390 KRTAP5-8O75690 187 aa3.96□□□□□ -1.78
PRKD2-208ENST00000597390 KRTAP5-2Q701N4 177 aa3.95□□□□□ -1.78
PRKD2-208ENST00000597390 LUZP6Q538Z0 58 aa3.87□□□□□ -1.79
PRKD2-208ENST00000597390 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.79
PRKD2-208ENST00000597390 KRTAP9-9Q9BYP9 154 aa3.81□□□□□ -1.8
PRKD2-208ENST00000597390 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
PRKD2-208ENST00000597390 MT3P25713 68 aa3.75□□□□□ -1.81
PRKD2-208ENST00000597390 NDUFAF8A1L188 74 aa3.57□□□□□ -1.84
PRKD2-208ENST00000597390 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
PRKD2-208ENST00000597390 KRTAP4-12Q9BQ66 201 aa3.46□□□□□ -1.86
PRKD2-208ENST00000597390 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
PRKD2-208ENST00000597390 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
PRKD2-208ENST00000597390 LCE3EQ5T5B0 92 aa3.25□□□□□ -1.89
PRKD2-208ENST00000597390 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
PRKD2-208ENST00000597390 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
PRKD2-208ENST00000597390 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
PRKD2-208ENST00000597390 INE1O15225 51 aa3.15□□□□□ -1.9
PRKD2-208ENST00000597390 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
PRKD2-208ENST00000597390 KRTAP5-11Q6L8G4 156 aa2.87□□□□□ -1.95
PRKD2-208ENST00000597390 PHGR1C9JFL3 82 aa2.86□□□□□ -1.95
PRKD2-208ENST00000597390 LCE1FQ5T754 118 aa2.79□□□□□ -1.96
PRKD2-208ENST00000597390 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
PRKD2-208ENST00000597390 PRM1P04553 51 aa2.69□□□□□ -1.98
PRKD2-208ENST00000597390 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
PRKD2-208ENST00000597390 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.03
PRKD2-208ENST00000597390 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
PRKD2-208ENST00000597390 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 101.4 ms