RNA–Protein interactions for RNA: ENST00000596714.1

SMG9-204, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-204ENST00000596714 KRTAP19-3Q7Z4W3 81 aa6.3□□□□□ -1.4
SMG9-204ENST00000596714 KRTAP23-1A1A580 65 aa6.24□□□□□ -1.41
SMG9-204ENST00000596714 LCE5AQ5TCM9 118 aa6.24□□□□□ -1.41
SMG9-204ENST00000596714 KRTAP12-3P60328 96 aa6.23□□□□□ -1.41
SMG9-204ENST00000596714 PP632Q6XCG6 107 aa6.21□□□□□ -1.42
SMG9-204ENST00000596714 MT1GP13640 62 aa6.2□□□□□ -1.42
SMG9-204ENST00000596714 BRK1Q8WUW1 75 aa6.2□□□□□ -1.42
SMG9-204ENST00000596714 MT1LQ93083 61 aa6.18□□□□□ -1.42
SMG9-204ENST00000596714 LCE3BQ5TA77 95 aa6.16□□□□□ -1.42
SMG9-204ENST00000596714 KRTAP2-2Q9BYT5 123 aa6.14□□□□□ -1.43
SMG9-204ENST00000596714 KRTAP2-1Q9BYU5 128 aa6.14□□□□□ -1.43
SMG9-204ENST00000596714 MT1MQ8N339 61 aa6.07□□□□□ -1.44
SMG9-204ENST00000596714 GPR98Q8WXG9 6306 aa6.04□□□□□ -1.44
SMG9-204ENST00000596714 DSTQ03001 7570 aaKnown RBP5.99□□□□□ -1.45
SMG9-204ENST00000596714 KRTAP19-4Q3LI73 84 aa5.96□□□□□ -1.46
SMG9-204ENST00000596714 KRTAP15-1Q3LI76 137 aa5.95□□□□□ -1.46
SMG9-204ENST00000596714 KRTAP4-3Q9BYR4 195 aa5.87□□□□□ -1.47
SMG9-204ENST00000596714 PMAIP1Q13794 54 aa5.86□□□□□ -1.47
SMG9-204ENST00000596714 KRTAP4-7Q9BYR0 210 aa5.85□□□□□ -1.47
SMG9-204ENST00000596714 LCE3CQ5T5A8 94 aa5.76□□□□□ -1.49
SMG9-204ENST00000596714 PRO0628Q9UI54 55 aa5.71□□□□□ -1.5
SMG9-204ENST00000596714 LCE4AQ5TA78 99 aa5.66□□□□□ -1.5
SMG9-204ENST00000596714 KRTAP4-9Q9BYQ8 210 aa5.6□□□□□ -1.51
SMG9-204ENST00000596714 KRTAP5-4Q6L8H1 288 aa5.57□□□□□ -1.52
SMG9-204ENST00000596714 LOC100996750A0A140TA64 210 aa5.53□□□□□ -1.52
SMG9-204ENST00000596714 MT4P47944 62 aa5.53□□□□□ -1.52
SMG9-204ENST00000596714 LCE1DQ5T752 114 aa5.53□□□□□ -1.52
SMG9-204ENST00000596714 KRTAP5-5Q701N2 237 aaPredicted RBP5.5□□□□□ -1.53
SMG9-204ENST00000596714 PRAC1Q96KF2 57 aa5.49□□□□□ -1.53
SMG9-204ENST00000596714 HMCN1Q96RW7 5635 aa5.42□□□□□ -1.54
SMG9-204ENST00000596714 KTN1-AS1Q86SY8 53 aa5.39□□□□□ -1.55
SMG9-204ENST00000596714 KRTAP12-4P60329 112 aa5.37□□□□□ -1.55
SMG9-204ENST00000596714 KRTAP4-6Q9BYQ5 205 aa5.37□□□□□ -1.55
SMG9-204ENST00000596714 KRTAP9-6A8MVA2 160 aa5.35□□□□□ -1.55
SMG9-204ENST00000596714 SPRR5A0A1B0GTR4 108 aa5.28□□□□□ -1.56
SMG9-204ENST00000596714 MT1AP04731 61 aa5.27□□□□□ -1.57
SMG9-204ENST00000596714 KRTAP20-2Q3LI61 65 aa5.24□□□□□ -1.57
SMG9-204ENST00000596714 SVIPQ8NHG7 77 aa5.23□□□□□ -1.57
SMG9-204ENST00000596714 KRTAP6-1Q3LI64 71 aa5.19□□□□□ -1.58
SMG9-204ENST00000596714 SYNE1Q8NF91 8797 aaKnown RBP5.17□□□□□ -1.58
SMG9-204ENST00000596714 AHNAK2Q8IVF2 5795 aa5.12□□□□□ -1.59
SMG9-204ENST00000596714 KRTAP5-10Q6L8G5 202 aa5.1□□□□□ -1.59
SMG9-204ENST00000596714 KRTAP5-7Q6L8G8 165 aa5.07□□□□□ -1.6
SMG9-204ENST00000596714 KRTAP9-4Q9BYQ2 154 aa5.06□□□□□ -1.6
SMG9-204ENST00000596714 KRTAP5-3Q6L8H2 238 aa5.05□□□□□ -1.6
SMG9-204ENST00000596714 KRTAP5-2Q701N4 177 aa4.93□□□□□ -1.62
SMG9-204ENST00000596714 KRTAP6-2Q3LI66 62 aa4.91□□□□□ -1.62
SMG9-204ENST00000596714 MT3P25713 68 aa4.84□□□□□ -1.63
SMG9-204ENST00000596714 LUZP6Q538Z0 58 aa4.71□□□□□ -1.66
SMG9-204ENST00000596714 KRTAP4-11Q9BYQ6 195 aa4.71□□□□□ -1.66
SMG9-204ENST00000596714 AHNAKQ09666 5890 aaKnown RBP4.61□□□□□ -1.67
SMG9-204ENST00000596714 OBSCNQ5VST9 7968 aa4.56□□□□□ -1.68
SMG9-204ENST00000596714 KRTAP5-8O75690 187 aa4.52□□□□□ -1.69
SMG9-204ENST00000596714 MUC5BQ9HC84 5762 aaPredicted RBP4.42□□□□□ -1.7
SMG9-204ENST00000596714 MUC5ACP98088 5654 aa4.42□□□□□ -1.7
SMG9-204ENST00000596714 KRTAP5-1Q6L8H4 278 aa4.35□□□□□ -1.71
SMG9-204ENST00000596714 LCE1EQ5T753 118 aa4.34□□□□□ -1.71
SMG9-204ENST00000596714 KRTAP9-9Q9BYP9 154 aa4.29□□□□□ -1.72
SMG9-204ENST00000596714 LCE3DQ9BYE3 92 aa4.25□□□□□ -1.73
SMG9-204ENST00000596714 LCE1BQ5T7P3 118 aa4.07□□□□□ -1.76
SMG9-204ENST00000596714 LCE3EQ5T5B0 92 aa4.06□□□□□ -1.76
SMG9-204ENST00000596714 NDUFAF8A1L188 74 aa4.05□□□□□ -1.76
SMG9-204ENST00000596714 LCE1CQ5T751 118 aa4.03□□□□□ -1.76
SMG9-204ENST00000596714 KRTAP4-2Q9BYR5 136 aa4.02□□□□□ -1.77
SMG9-204ENST00000596714 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.69□□□□□ -1.82
SMG9-204ENST00000596714 H3BS24 57 aa3.63□□□□□ -1.83
SMG9-204ENST00000596714 KRTAP5-11Q6L8G4 156 aa3.61□□□□□ -1.83
SMG9-204ENST00000596714 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
SMG9-204ENST00000596714 KRTAP4-12Q9BQ66 201 aa3.52□□□□□ -1.85
SMG9-204ENST00000596714 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
SMG9-204ENST00000596714 KRTAP21-2Q3LI59 83 aa3.4□□□□□ -1.87
SMG9-204ENST00000596714 INE1O15225 51 aa3.36□□□□□ -1.87
SMG9-204ENST00000596714 PRM1P04553 51 aa3.23□□□□□ -1.89
SMG9-204ENST00000596714 PHGR1C9JFL3 82 aa3.1□□□□□ -1.91
SMG9-204ENST00000596714 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
SMG9-204ENST00000596714 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
SMG9-204ENST00000596714 KRTAP21-1Q3LI58 79 aa2.31□□□□□ -2.04
SMG9-204ENST00000596714 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 35.8 ms