RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 KRTAP5-4Q6L8H1 288 aa3.69□□□□□ -1.82
CHMP2A-202ENST00000596708 KRTAP5-10Q6L8G5 202 aa3.68□□□□□ -1.82
CHMP2A-202ENST00000596708 K7ERU9 68 aa3.66□□□□□ -1.82
CHMP2A-202ENST00000596708 SERP2Q8N6R1 65 aa3.66□□□□□ -1.82
CHMP2A-202ENST00000596708 C10orf95Q9H7T3 257 aa3.66□□□□□ -1.82
CHMP2A-202ENST00000596708 LCE3AQ5TA76 89 aa3.64□□□□□ -1.83
CHMP2A-202ENST00000596708 TNP1P09430 55 aa3.62□□□□□ -1.83
CHMP2A-202ENST00000596708 SMIM26A0A096LP01 95 aa3.61□□□□□ -1.83
CHMP2A-202ENST00000596708 A8MU10 97 aa3.57□□□□□ -1.84
CHMP2A-202ENST00000596708 KRTAP5-7Q6L8G8 165 aa3.57□□□□□ -1.84
CHMP2A-202ENST00000596708 A0A1B0GU69 56 aa3.56□□□□□ -1.84
CHMP2A-202ENST00000596708 PCP4P48539 62 aa3.51□□□□□ -1.85
CHMP2A-202ENST00000596708 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
CHMP2A-202ENST00000596708 KRTAP12-3P60328 96 aa3.5□□□□□ -1.85
CHMP2A-202ENST00000596708 H3BS24 57 aa3.49□□□□□ -1.85
CHMP2A-202ENST00000596708 COX7CP15954 63 aa3.49□□□□□ -1.85
CHMP2A-202ENST00000596708 H7BZZ5 65 aa3.47□□□□□ -1.85
CHMP2A-202ENST00000596708 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
CHMP2A-202ENST00000596708 KRTAP12-4P60329 112 aa3.45□□□□□ -1.86
CHMP2A-202ENST00000596708 KRTAP5-5Q701N2 237 aaPredicted RBP3.44□□□□□ -1.86
CHMP2A-202ENST00000596708 PRR15LQ9BU68 103 aa3.39□□□□□ -1.87
CHMP2A-202ENST00000596708 SYNE1Q8NF91 8797 aaKnown RBP3.38□□□□□ -1.87
CHMP2A-202ENST00000596708 LINC01558Q9Y6Z2 57 aa3.29□□□□□ -1.88
CHMP2A-202ENST00000596708 A0A0A0MQY5 61 aa3.28□□□□□ -1.88
CHMP2A-202ENST00000596708 KRTAP25-1Q3LHN0 102 aa3.28□□□□□ -1.88
CHMP2A-202ENST00000596708 KRTAP19-4Q3LI73 84 aa3.27□□□□□ -1.89
CHMP2A-202ENST00000596708 UQCR11O14957 56 aa3.26□□□□□ -1.89
CHMP2A-202ENST00000596708 ANAPC13Q9BS18 74 aa3.25□□□□□ -1.89
CHMP2A-202ENST00000596708 CCDC179H3BU77 68 aa3.24□□□□□ -1.89
CHMP2A-202ENST00000596708 ATP5EP56381 51 aaPredicted RBP3.21□□□□□ -1.9
CHMP2A-202ENST00000596708 KRTAP15-1Q3LI76 137 aa3.2□□□□□ -1.9
CHMP2A-202ENST00000596708 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
CHMP2A-202ENST00000596708 KRTAP5-2Q701N4 177 aa3.19□□□□□ -1.9
CHMP2A-202ENST00000596708 MT1AP04731 61 aa3.18□□□□□ -1.9
CHMP2A-202ENST00000596708 K7ERS5 55 aa3.17□□□□□ -1.9
CHMP2A-202ENST00000596708 MIR22HGQ0VDD5 57 aa3.17□□□□□ -1.9
CHMP2A-202ENST00000596708 KRTAP6-1Q3LI64 71 aa3.17□□□□□ -1.9
CHMP2A-202ENST00000596708 KRTAP5-8O75690 187 aa3.15□□□□□ -1.91
CHMP2A-202ENST00000596708 KRTAP23-1A1A580 65 aa3.13□□□□□ -1.91
CHMP2A-202ENST00000596708 KRTAP6-2Q3LI66 62 aa3.07□□□□□ -1.92
CHMP2A-202ENST00000596708 AHNAKQ09666 5890 aaKnown RBP3.06□□□□□ -1.92
CHMP2A-202ENST00000596708 MUC5BQ9HC84 5762 aaPredicted RBP3.05□□□□□ -1.92
CHMP2A-202ENST00000596708 TMEM258P61165 79 aa3.05□□□□□ -1.92
CHMP2A-202ENST00000596708 MUC5ACP98088 5654 aa3.04□□□□□ -1.92
CHMP2A-202ENST00000596708 V9GYY9 64 aa3.03□□□□□ -1.92
CHMP2A-202ENST00000596708 OBSCNQ5VST9 7968 aa3.02□□□□□ -1.93
CHMP2A-202ENST00000596708 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
CHMP2A-202ENST00000596708 PSPHP1O15172 72 aa3□□□□□ -1.93
CHMP2A-202ENST00000596708 RPS28P62857 69 aaKnown RBP2.98□□□□□ -1.93
CHMP2A-202ENST00000596708 CDC42SE1Q9NRR8 79 aa2.96□□□□□ -1.94
CHMP2A-202ENST00000596708 Q1T7F1 81 aa2.95□□□□□ -1.94
CHMP2A-202ENST00000596708 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
CHMP2A-202ENST00000596708 MT3P25713 68 aa2.93□□□□□ -1.94
CHMP2A-202ENST00000596708 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.95
CHMP2A-202ENST00000596708 A6NED7 52 aa2.89□□□□□ -1.95
CHMP2A-202ENST00000596708 ROMO1P60602 79 aa2.89□□□□□ -1.95
CHMP2A-202ENST00000596708 PRO0628Q9UI54 55 aa2.76□□□□□ -1.97
CHMP2A-202ENST00000596708 PRAC1Q96KF2 57 aa2.74□□□□□ -1.97
CHMP2A-202ENST00000596708 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
CHMP2A-202ENST00000596708 PMAIP1Q13794 54 aa2.65□□□□□ -1.99
CHMP2A-202ENST00000596708 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
CHMP2A-202ENST00000596708 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
CHMP2A-202ENST00000596708 BRK1Q8WUW1 75 aa2.61□□□□□ -1.99
CHMP2A-202ENST00000596708 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
CHMP2A-202ENST00000596708 KTN1-AS1Q86SY8 53 aa2.47□□□□□ -2.01
CHMP2A-202ENST00000596708 LUZP6Q538Z0 58 aa2.45□□□□□ -2.02
CHMP2A-202ENST00000596708 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
CHMP2A-202ENST00000596708 NDUFAF8A1L188 74 aa2.36□□□□□ -2.03
CHMP2A-202ENST00000596708 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
CHMP2A-202ENST00000596708 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
CHMP2A-202ENST00000596708 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
CHMP2A-202ENST00000596708 LCE3EQ5T5B0 92 aa2.11□□□□□ -2.07
CHMP2A-202ENST00000596708 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
CHMP2A-202ENST00000596708 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
CHMP2A-202ENST00000596708 INE1O15225 51 aa1.77□□□□□ -2.13
CHMP2A-202ENST00000596708 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
CHMP2A-202ENST00000596708 PRM1P04553 51 aa1.47□□□□□ -2.17
CHMP2A-202ENST00000596708 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 12.6 ms