RNA–Protein interactions for RNA: ENST00000596644.5

IRF3-211, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-211ENST00000596644 LCE3BQ5TA77 95 aa5.45□□□□□ -1.54
IRF3-211ENST00000596644 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
IRF3-211ENST00000596644 KRTAP25-1Q3LHN0 102 aa5.41□□□□□ -1.54
IRF3-211ENST00000596644 MT1GP13640 62 aa5.37□□□□□ -1.55
IRF3-211ENST00000596644 PP632Q6XCG6 107 aa5.35□□□□□ -1.55
IRF3-211ENST00000596644 MT1LQ93083 61 aa5.35□□□□□ -1.55
IRF3-211ENST00000596644 KRTAP12-3P60328 96 aa5.31□□□□□ -1.56
IRF3-211ENST00000596644 CDC42SE1Q9NRR8 79 aa5.3□□□□□ -1.56
IRF3-211ENST00000596644 MT1MQ8N339 61 aa5.28□□□□□ -1.56
IRF3-211ENST00000596644 ROMO1P60602 79 aa5.21□□□□□ -1.58
IRF3-211ENST00000596644 KRTAP23-1A1A580 65 aa5.19□□□□□ -1.58
IRF3-211ENST00000596644 DSTQ03001 7570 aaKnown RBP5.17□□□□□ -1.58
IRF3-211ENST00000596644 KRTAP4-3Q9BYR4 195 aa5.15□□□□□ -1.59
IRF3-211ENST00000596644 KRTAP4-7Q9BYR0 210 aa5.09□□□□□ -1.59
IRF3-211ENST00000596644 KRTAP15-1Q3LI76 137 aa5.03□□□□□ -1.6
IRF3-211ENST00000596644 KRTAP19-4Q3LI73 84 aa5.01□□□□□ -1.61
IRF3-211ENST00000596644 KRTAP4-9Q9BYQ8 210 aa5.01□□□□□ -1.61
IRF3-211ENST00000596644 LCE4AQ5TA78 99 aa4.98□□□□□ -1.61
IRF3-211ENST00000596644 BRK1Q8WUW1 75 aa4.97□□□□□ -1.61
IRF3-211ENST00000596644 LCE1DQ5T752 114 aa4.92□□□□□ -1.62
IRF3-211ENST00000596644 MT4P47944 62 aa4.91□□□□□ -1.62
IRF3-211ENST00000596644 LCE3CQ5T5A8 94 aa4.91□□□□□ -1.62
IRF3-211ENST00000596644 KRTAP5-4Q6L8H1 288 aa4.89□□□□□ -1.63
IRF3-211ENST00000596644 LOC100996750A0A140TA64 210 aa4.82□□□□□ -1.64
IRF3-211ENST00000596644 KRTAP5-5Q701N2 237 aaPredicted RBP4.8□□□□□ -1.64
IRF3-211ENST00000596644 HMCN1Q96RW7 5635 aa4.77□□□□□ -1.65
IRF3-211ENST00000596644 KRTAP4-6Q9BYQ5 205 aa4.76□□□□□ -1.65
IRF3-211ENST00000596644 KRTAP12-4P60329 112 aa4.67□□□□□ -1.66
IRF3-211ENST00000596644 PMAIP1Q13794 54 aa4.67□□□□□ -1.66
IRF3-211ENST00000596644 SPRR5A0A1B0GTR4 108 aa4.63□□□□□ -1.67
IRF3-211ENST00000596644 KRTAP20-2Q3LI61 65 aa4.63□□□□□ -1.67
IRF3-211ENST00000596644 GPR98Q8WXG9 6306 aa4.6□□□□□ -1.67
IRF3-211ENST00000596644 KRTAP9-6A8MVA2 160 aa4.59□□□□□ -1.67
IRF3-211ENST00000596644 MT1AP04731 61 aa4.56□□□□□ -1.68
IRF3-211ENST00000596644 SVIPQ8NHG7 77 aa4.56□□□□□ -1.68
IRF3-211ENST00000596644 AHNAK2Q8IVF2 5795 aa4.52□□□□□ -1.69
IRF3-211ENST00000596644 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
IRF3-211ENST00000596644 SYNE1Q8NF91 8797 aaKnown RBP4.5□□□□□ -1.69
IRF3-211ENST00000596644 PRO0628Q9UI54 55 aa4.47□□□□□ -1.69
IRF3-211ENST00000596644 KRTAP5-3Q6L8H2 238 aa4.46□□□□□ -1.7
IRF3-211ENST00000596644 KRTAP5-10Q6L8G5 202 aa4.45□□□□□ -1.7
IRF3-211ENST00000596644 PRAC1Q96KF2 57 aa4.45□□□□□ -1.7
IRF3-211ENST00000596644 KRTAP9-4Q9BYQ2 154 aa4.38□□□□□ -1.71
IRF3-211ENST00000596644 KRTAP5-2Q701N4 177 aa4.32□□□□□ -1.72
IRF3-211ENST00000596644 KRTAP6-2Q3LI66 62 aa4.28□□□□□ -1.72
IRF3-211ENST00000596644 KRTAP5-7Q6L8G8 165 aa4.25□□□□□ -1.73
IRF3-211ENST00000596644 KTN1-AS1Q86SY8 53 aa4.25□□□□□ -1.73
IRF3-211ENST00000596644 MT3P25713 68 aa4.17□□□□□ -1.74
IRF3-211ENST00000596644 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
IRF3-211ENST00000596644 KRTAP5-8O75690 187 aa4.02□□□□□ -1.77
IRF3-211ENST00000596644 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.78
IRF3-211ENST00000596644 KRTAP5-1Q6L8H4 278 aa3.84□□□□□ -1.79
IRF3-211ENST00000596644 KRTAP9-9Q9BYP9 154 aa3.8□□□□□ -1.8
IRF3-211ENST00000596644 LUZP6Q538Z0 58 aa3.77□□□□□ -1.81
IRF3-211ENST00000596644 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
IRF3-211ENST00000596644 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
IRF3-211ENST00000596644 MUC5BQ9HC84 5762 aaPredicted RBP3.68□□□□□ -1.82
IRF3-211ENST00000596644 AHNAKQ09666 5890 aaKnown RBP3.65□□□□□ -1.83
IRF3-211ENST00000596644 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
IRF3-211ENST00000596644 LCE1BQ5T7P3 118 aa3.56□□□□□ -1.84
IRF3-211ENST00000596644 KRTAP4-2Q9BYR5 136 aa3.53□□□□□ -1.84
IRF3-211ENST00000596644 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
IRF3-211ENST00000596644 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
IRF3-211ENST00000596644 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
IRF3-211ENST00000596644 NDUFAF8A1L188 74 aa3.17□□□□□ -1.9
IRF3-211ENST00000596644 KRTAP5-11Q6L8G4 156 aa3.14□□□□□ -1.91
IRF3-211ENST00000596644 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
IRF3-211ENST00000596644 H3BS24 57 aa3.12□□□□□ -1.91
IRF3-211ENST00000596644 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
IRF3-211ENST00000596644 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
IRF3-211ENST00000596644 A0A0A0MQY5 61 aa2.87□□□□□ -1.95
IRF3-211ENST00000596644 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
IRF3-211ENST00000596644 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
IRF3-211ENST00000596644 PRM1P04553 51 aa2.68□□□□□ -1.98
IRF3-211ENST00000596644 INE1O15225 51 aa2.66□□□□□ -1.98
IRF3-211ENST00000596644 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
IRF3-211ENST00000596644 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
IRF3-211ENST00000596644 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms