RNA–Protein interactions for RNA: ENST00000596240.5

LINC00347-204, long intergenic non-protein coding RNA 347, humanhuman

TSL 3

Gene LINC00347, Length 802 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-204ENST00000596240 KRTAP19-6Q3LI70 58 aa3.76□□□□□ -1.81
LINC00347-204ENST00000596240 KRTAP12-1P59990 96 aa3.75□□□□□ -1.81
LINC00347-204ENST00000596240 KRTAP12-2P59991 146 aa3.72□□□□□ -1.81
LINC00347-204ENST00000596240 SPRR2GQ9BYE4 73 aa3.72□□□□□ -1.81
LINC00347-204ENST00000596240 KTN1-AS1Q86SY8 53 aa3.68□□□□□ -1.82
LINC00347-204ENST00000596240 ROMO1P60602 79 aa3.66□□□□□ -1.82
LINC00347-204ENST00000596240 CAMK2N1Q7Z7J9 78 aa3.66□□□□□ -1.82
LINC00347-204ENST00000596240 PLAC4Q8WY50 150 aa3.66□□□□□ -1.82
LINC00347-204ENST00000596240 KRTAP5-1Q6L8H4 278 aa3.65□□□□□ -1.83
LINC00347-204ENST00000596240 MUC12Q9UKN1 5478 aa3.62□□□□□ -1.83
LINC00347-204ENST00000596240 KRTAP19-8Q3LI54 63 aa3.61□□□□□ -1.83
LINC00347-204ENST00000596240 NEBP20929 6669 aa3.6□□□□□ -1.83
LINC00347-204ENST00000596240 MT1BP07438 61 aa3.6□□□□□ -1.83
LINC00347-204ENST00000596240 KRTAP6-3Q3LI67 103 aa3.59□□□□□ -1.83
LINC00347-204ENST00000596240 LCE3EQ5T5B0 92 aa3.59□□□□□ -1.83
LINC00347-204ENST00000596240 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
LINC00347-204ENST00000596240 KRTAP25-1Q3LHN0 102 aa3.51□□□□□ -1.85
LINC00347-204ENST00000596240 KMT2DO14686 5537 aa3.5□□□□□ -1.85
LINC00347-204ENST00000596240 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
LINC00347-204ENST00000596240 PRO2289Q9P1D8 64 aa3.49□□□□□ -1.85
LINC00347-204ENST00000596240 MDN1Q9NU22 5596 aa3.48□□□□□ -1.85
LINC00347-204ENST00000596240 TNP1P09430 55 aa3.48□□□□□ -1.85
LINC00347-204ENST00000596240 KRTAP5-9P26371 169 aa3.45□□□□□ -1.86
LINC00347-204ENST00000596240 KRTAP5-4Q6L8H1 288 aa3.44□□□□□ -1.86
LINC00347-204ENST00000596240 MT1XP80297 61 aa3.43□□□□□ -1.86
LINC00347-204ENST00000596240 PP632Q6XCG6 107 aa3.42□□□□□ -1.86
LINC00347-204ENST00000596240 KRTAP20-1Q3LI63 56 aa3.35□□□□□ -1.87
LINC00347-204ENST00000596240 SPRR2FQ96RM1 72 aa3.29□□□□□ -1.88
LINC00347-204ENST00000596240 LCE3AQ5TA76 89 aa3.27□□□□□ -1.89
LINC00347-204ENST00000596240 SPRR2EP22531 72 aa3.25□□□□□ -1.89
LINC00347-204ENST00000596240 SPRR2BP35325 72 aa3.25□□□□□ -1.89
LINC00347-204ENST00000596240 SPRR2AP35326 72 aa3.25□□□□□ -1.89
LINC00347-204ENST00000596240 KRTAP8-1Q8IUC2 63 aa3.23□□□□□ -1.89
LINC00347-204ENST00000596240 KRTAP2-3P0C7H8 128 aa3.22□□□□□ -1.89
LINC00347-204ENST00000596240 KRTAP2-4Q9BYR9 128 aa3.22□□□□□ -1.89
LINC00347-204ENST00000596240 OBSCNQ5VST9 7968 aa3.19□□□□□ -1.9
LINC00347-204ENST00000596240 KRTAP12-3P60328 96 aa3.16□□□□□ -1.9
LINC00347-204ENST00000596240 SPRR2DP22532 72 aa3.14□□□□□ -1.91
LINC00347-204ENST00000596240 KRTAP4-3Q9BYR4 195 aa3.13□□□□□ -1.91
LINC00347-204ENST00000596240 KRTAP2-1Q9BYU5 128 aa3.12□□□□□ -1.91
LINC00347-204ENST00000596240 KRTAP19-5Q3LI72 72 aa3.11□□□□□ -1.91
LINC00347-204ENST00000596240 DSTQ03001 7570 aaKnown RBP3.09□□□□□ -1.91
LINC00347-204ENST00000596240 KRTAP19-7Q3SYF9 63 aa3.05□□□□□ -1.92
LINC00347-204ENST00000596240 KRTAP5-5Q701N2 237 aaPredicted RBP3.02□□□□□ -1.93
LINC00347-204ENST00000596240 MT1EP04732 61 aa3.01□□□□□ -1.93
LINC00347-204ENST00000596240 SPRR5A0A1B0GTR4 108 aa2.97□□□□□ -1.93
LINC00347-204ENST00000596240 LUZP6Q538Z0 58 aa2.97□□□□□ -1.93
LINC00347-204ENST00000596240 GPR98Q8WXG9 6306 aa2.97□□□□□ -1.93
LINC00347-204ENST00000596240 MT1LQ93083 61 aa2.96□□□□□ -1.94
LINC00347-204ENST00000596240 KRTAP19-3Q7Z4W3 81 aa2.94□□□□□ -1.94
LINC00347-204ENST00000596240 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
LINC00347-204ENST00000596240 MT1GP13640 62 aa2.9□□□□□ -1.95
LINC00347-204ENST00000596240 HMCN1Q96RW7 5635 aa2.88□□□□□ -1.95
LINC00347-204ENST00000596240 MT1MQ8N339 61 aa2.84□□□□□ -1.95
LINC00347-204ENST00000596240 KRTAP5-2Q701N4 177 aa2.82□□□□□ -1.96
LINC00347-204ENST00000596240 AHNAK2Q8IVF2 5795 aa2.8□□□□□ -1.96
LINC00347-204ENST00000596240 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
LINC00347-204ENST00000596240 LCE1BQ5T7P3 118 aa2.78□□□□□ -1.96
LINC00347-204ENST00000596240 MT4P47944 62 aa2.76□□□□□ -1.97
LINC00347-204ENST00000596240 KRTAP5-10Q6L8G5 202 aa2.68□□□□□ -1.98
LINC00347-204ENST00000596240 SYNE1Q8NF91 8797 aaKnown RBP2.65□□□□□ -1.99
LINC00347-204ENST00000596240 KRTAP20-2Q3LI61 65 aa2.6□□□□□ -1.99
LINC00347-204ENST00000596240 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
LINC00347-204ENST00000596240 MT1AP04731 61 aa2.53□□□□□ -2
LINC00347-204ENST00000596240 KRTAP12-4P60329 112 aa2.47□□□□□ -2.01
LINC00347-204ENST00000596240 KRTAP6-1Q3LI64 71 aa2.47□□□□□ -2.01
LINC00347-204ENST00000596240 INE1O15225 51 aa2.4□□□□□ -2.03
LINC00347-204ENST00000596240 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
LINC00347-204ENST00000596240 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
LINC00347-204ENST00000596240 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
LINC00347-204ENST00000596240 MUC5ACP98088 5654 aa2.3□□□□□ -2.04
LINC00347-204ENST00000596240 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
LINC00347-204ENST00000596240 KRTAP6-2Q3LI66 62 aa2.29□□□□□ -2.04
LINC00347-204ENST00000596240 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
LINC00347-204ENST00000596240 PRM1P04553 51 aa1.89□□□□□ -2.11
LINC00347-204ENST00000596240 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
LINC00347-204ENST00000596240 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
LINC00347-204ENST00000596240 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 57 ms