RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 TNP1P09430 55 aa5.86□□□□□ -1.47
USHBP1-205ENST00000595993 LCE1DQ5T752 114 aa5.86□□□□□ -1.47
USHBP1-205ENST00000595993 HMCN1Q96RW7 5635 aa5.85□□□□□ -1.47
USHBP1-205ENST00000595993 KRTAP19-5Q3LI72 72 aa5.85□□□□□ -1.47
USHBP1-205ENST00000595993 A6NED7 52 aa5.83□□□□□ -1.48
USHBP1-205ENST00000595993 LCE3AQ5TA76 89 aa5.83□□□□□ -1.48
USHBP1-205ENST00000595993 LCE4AQ5TA78 99 aa5.76□□□□□ -1.49
USHBP1-205ENST00000595993 MT1GP13640 62 aa5.75□□□□□ -1.49
USHBP1-205ENST00000595993 AHNAK2Q8IVF2 5795 aa5.74□□□□□ -1.49
USHBP1-205ENST00000595993 K7ERS5 55 aa5.73□□□□□ -1.49
USHBP1-205ENST00000595993 MT4P47944 62 aa5.69□□□□□ -1.5
USHBP1-205ENST00000595993 PP632Q6XCG6 107 aa5.67□□□□□ -1.5
USHBP1-205ENST00000595993 KRTAP5-10Q6L8G5 202 aa5.66□□□□□ -1.5
USHBP1-205ENST00000595993 KRTAP5-4Q6L8H1 288 aa5.65□□□□□ -1.5
USHBP1-205ENST00000595993 MT1MQ8N339 61 aa5.65□□□□□ -1.5
USHBP1-205ENST00000595993 MT1LQ93083 61 aa5.65□□□□□ -1.5
USHBP1-205ENST00000595993 KRTAP25-1Q3LHN0 102 aa5.64□□□□□ -1.51
USHBP1-205ENST00000595993 CDC42SE1Q9NRR8 79 aa5.64□□□□□ -1.51
USHBP1-205ENST00000595993 KRTAP12-3P60328 96 aa5.58□□□□□ -1.52
USHBP1-205ENST00000595993 KRTAP4-6Q9BYQ5 205 aa5.54□□□□□ -1.52
USHBP1-205ENST00000595993 BRK1Q8WUW1 75 aa5.51□□□□□ -1.53
USHBP1-205ENST00000595993 KRTAP4-3Q9BYR4 195 aa5.51□□□□□ -1.53
USHBP1-205ENST00000595993 KRTAP5-7Q6L8G8 165 aa5.48□□□□□ -1.53
USHBP1-205ENST00000595993 ROMO1P60602 79 aa5.44□□□□□ -1.54
USHBP1-205ENST00000595993 KRTAP23-1A1A580 65 aa5.43□□□□□ -1.54
USHBP1-205ENST00000595993 KRTAP5-3Q6L8H2 238 aa5.43□□□□□ -1.54
USHBP1-205ENST00000595993 KRTAP4-7Q9BYR0 210 aa5.43□□□□□ -1.54
USHBP1-205ENST00000595993 KRTAP20-2Q3LI61 65 aa5.32□□□□□ -1.56
USHBP1-205ENST00000595993 KRTAP15-1Q3LI76 137 aa5.28□□□□□ -1.56
USHBP1-205ENST00000595993 KRTAP5-5Q701N2 237 aaPredicted RBP5.27□□□□□ -1.57
USHBP1-205ENST00000595993 SPRR5A0A1B0GTR4 108 aa5.26□□□□□ -1.57
USHBP1-205ENST00000595993 KRTAP19-4Q3LI73 84 aa5.19□□□□□ -1.58
USHBP1-205ENST00000595993 PMAIP1Q13794 54 aa5.16□□□□□ -1.58
USHBP1-205ENST00000595993 LCE3CQ5T5A8 94 aa5.16□□□□□ -1.58
USHBP1-205ENST00000595993 PRO0628Q9UI54 55 aa5.14□□□□□ -1.59
USHBP1-205ENST00000595993 LOC100996750A0A140TA64 210 aa5.13□□□□□ -1.59
USHBP1-205ENST00000595993 KRTAP12-4P60329 112 aa5.13□□□□□ -1.59
USHBP1-205ENST00000595993 SVIPQ8NHG7 77 aa5.11□□□□□ -1.59
USHBP1-205ENST00000595993 SYNE1Q8NF91 8797 aaKnown RBP5.1□□□□□ -1.59
USHBP1-205ENST00000595993 PRAC1Q96KF2 57 aa4.96□□□□□ -1.62
USHBP1-205ENST00000595993 KRTAP4-11Q9BYQ6 195 aa4.93□□□□□ -1.62
USHBP1-205ENST00000595993 KRTAP9-6A8MVA2 160 aa4.92□□□□□ -1.62
USHBP1-205ENST00000595993 KRTAP5-2Q701N4 177 aa4.89□□□□□ -1.63
USHBP1-205ENST00000595993 KTN1-AS1Q86SY8 53 aa4.84□□□□□ -1.63
USHBP1-205ENST00000595993 AHNAKQ09666 5890 aaKnown RBP4.84□□□□□ -1.64
USHBP1-205ENST00000595993 MUC5ACP98088 5654 aa4.82□□□□□ -1.64
USHBP1-205ENST00000595993 MT1AP04731 61 aa4.81□□□□□ -1.64
USHBP1-205ENST00000595993 MUC5BQ9HC84 5762 aaPredicted RBP4.8□□□□□ -1.64
USHBP1-205ENST00000595993 KRTAP5-8O75690 187 aa4.79□□□□□ -1.64
USHBP1-205ENST00000595993 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
USHBP1-205ENST00000595993 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.66
USHBP1-205ENST00000595993 KRTAP9-4Q9BYQ2 154 aa4.62□□□□□ -1.67
USHBP1-205ENST00000595993 KRTAP6-2Q3LI66 62 aa4.58□□□□□ -1.68
USHBP1-205ENST00000595993 KRTAP9-9Q9BYP9 154 aa4.55□□□□□ -1.68
USHBP1-205ENST00000595993 KRTAP5-1Q6L8H4 278 aa4.44□□□□□ -1.7
USHBP1-205ENST00000595993 MT3P25713 68 aa4.36□□□□□ -1.71
USHBP1-205ENST00000595993 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
USHBP1-205ENST00000595993 LUZP6Q538Z0 58 aa4.01□□□□□ -1.77
USHBP1-205ENST00000595993 KRTAP4-2Q9BYR5 136 aa3.93□□□□□ -1.78
USHBP1-205ENST00000595993 LCE1CQ5T751 118 aa3.82□□□□□ -1.8
USHBP1-205ENST00000595993 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
USHBP1-205ENST00000595993 LCE3DQ9BYE3 92 aa3.74□□□□□ -1.81
USHBP1-205ENST00000595993 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
USHBP1-205ENST00000595993 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
USHBP1-205ENST00000595993 LCE3EQ5T5B0 92 aa3.56□□□□□ -1.84
USHBP1-205ENST00000595993 H3BS24 57 aa3.55□□□□□ -1.84
USHBP1-205ENST00000595993 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
USHBP1-205ENST00000595993 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
USHBP1-205ENST00000595993 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.46□□□□□ -1.86
USHBP1-205ENST00000595993 PHGR1C9JFL3 82 aa3.26□□□□□ -1.89
USHBP1-205ENST00000595993 A0A0A0MQY5 61 aa3.25□□□□□ -1.89
USHBP1-205ENST00000595993 KRTAP21-2Q3LI59 83 aa3.16□□□□□ -1.9
USHBP1-205ENST00000595993 INE1O15225 51 aa2.99□□□□□ -1.93
USHBP1-205ENST00000595993 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.94
USHBP1-205ENST00000595993 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
USHBP1-205ENST00000595993 PRM1P04553 51 aa2.81□□□□□ -1.96
USHBP1-205ENST00000595993 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
USHBP1-205ENST00000595993 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 61.6 ms