RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 SPATA8Q6RVD6 105 aa5.16□□□□□ -1.58
SHKBP1-208ENST00000595726 A0A0D9SG42 100 aa5.15□□□□□ -1.59
SHKBP1-208ENST00000595726 A0A1B0GU33 70 aa5.15□□□□□ -1.59
SHKBP1-208ENST00000595726 KRTAP19-7Q3SYF9 63 aa5.15□□□□□ -1.59
SHKBP1-208ENST00000595726 PSPHP1O15172 72 aa5.14□□□□□ -1.59
SHKBP1-208ENST00000595726 MT1EP04732 61 aa5.13□□□□□ -1.59
SHKBP1-208ENST00000595726 KRTAP4-6Q9BYQ5 205 aa5.13□□□□□ -1.59
SHKBP1-208ENST00000595726 SPRR5A0A1B0GTR4 108 aa5.11□□□□□ -1.59
SHKBP1-208ENST00000595726 KRTAP5-3Q6L8H2 238 aa5.1□□□□□ -1.59
SHKBP1-208ENST00000595726 PRAC1Q96KF2 57 aa5.09□□□□□ -1.59
SHKBP1-208ENST00000595726 UQCR11O14957 56 aa5.08□□□□□ -1.6
SHKBP1-208ENST00000595726 KRTAP12-1P59990 96 aa5.07□□□□□ -1.6
SHKBP1-208ENST00000595726 SPINT4Q6UDR6 99 aa5.07□□□□□ -1.6
SHKBP1-208ENST00000595726 KRTAP15-1Q3LI76 137 aa5.06□□□□□ -1.6
SHKBP1-208ENST00000595726 A6NED7 52 aa5.04□□□□□ -1.6
SHKBP1-208ENST00000595726 KRTAP5-4Q6L8H1 288 aa5.03□□□□□ -1.6
SHKBP1-208ENST00000595726 MT1GP13640 62 aa4.99□□□□□ -1.61
SHKBP1-208ENST00000595726 MIR22HGQ0VDD5 57 aa4.99□□□□□ -1.61
SHKBP1-208ENST00000595726 A8MU10 97 aa4.98□□□□□ -1.61
SHKBP1-208ENST00000595726 MT1MQ8N339 61 aa4.93□□□□□ -1.62
SHKBP1-208ENST00000595726 KRTAP4-3Q9BYR4 195 aa4.93□□□□□ -1.62
SHKBP1-208ENST00000595726 PP632Q6XCG6 107 aa4.92□□□□□ -1.62
SHKBP1-208ENST00000595726 CDC42SE1Q9NRR8 79 aa4.92□□□□□ -1.62
SHKBP1-208ENST00000595726 BRK1Q8WUW1 75 aa4.89□□□□□ -1.63
SHKBP1-208ENST00000595726 KRTAP19-5Q3LI72 72 aa4.88□□□□□ -1.63
SHKBP1-208ENST00000595726 K7ERS5 55 aa4.87□□□□□ -1.63
SHKBP1-208ENST00000595726 C10orf95Q9H7T3 257 aa4.84□□□□□ -1.63
SHKBP1-208ENST00000595726 KRTAP20-2Q3LI61 65 aa4.81□□□□□ -1.64
SHKBP1-208ENST00000595726 MT1LQ93083 61 aa4.8□□□□□ -1.64
SHKBP1-208ENST00000595726 TNP1P09430 55 aa4.79□□□□□ -1.64
SHKBP1-208ENST00000595726 LCE3AQ5TA76 89 aa4.78□□□□□ -1.64
SHKBP1-208ENST00000595726 AHNAKQ09666 5890 aaKnown RBP4.77□□□□□ -1.65
SHKBP1-208ENST00000595726 KRTAP9-4Q9BYQ2 154 aa4.75□□□□□ -1.65
SHKBP1-208ENST00000595726 PRO0628Q9UI54 55 aa4.74□□□□□ -1.65
SHKBP1-208ENST00000595726 MUC5ACP98088 5654 aa4.68□□□□□ -1.66
SHKBP1-208ENST00000595726 KRTAP9-9Q9BYP9 154 aa4.66□□□□□ -1.66
SHKBP1-208ENST00000595726 PMAIP1Q13794 54 aa4.64□□□□□ -1.67
SHKBP1-208ENST00000595726 MUC5BQ9HC84 5762 aaPredicted RBP4.63□□□□□ -1.67
SHKBP1-208ENST00000595726 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
SHKBP1-208ENST00000595726 SYNE1Q8NF91 8797 aaKnown RBP4.6□□□□□ -1.67
SHKBP1-208ENST00000595726 KRTAP4-12Q9BQ66 201 aa4.59□□□□□ -1.67
SHKBP1-208ENST00000595726 KRTAP12-3P60328 96 aa4.58□□□□□ -1.68
SHKBP1-208ENST00000595726 KRTAP12-4P60329 112 aa4.58□□□□□ -1.68
SHKBP1-208ENST00000595726 KRTAP5-5Q701N2 237 aaPredicted RBP4.57□□□□□ -1.68
SHKBP1-208ENST00000595726 ROMO1P60602 79 aa4.56□□□□□ -1.68
SHKBP1-208ENST00000595726 KRTAP25-1Q3LHN0 102 aa4.55□□□□□ -1.68
SHKBP1-208ENST00000595726 LOC100996750A0A140TA64 210 aa4.54□□□□□ -1.68
SHKBP1-208ENST00000595726 KRTAP4-11Q9BYQ6 195 aa4.54□□□□□ -1.68
SHKBP1-208ENST00000595726 NDUFAF8A1L188 74 aa4.52□□□□□ -1.69
SHKBP1-208ENST00000595726 KRTAP5-8O75690 187 aa4.45□□□□□ -1.7
SHKBP1-208ENST00000595726 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
SHKBP1-208ENST00000595726 KTN1-AS1Q86SY8 53 aa4.41□□□□□ -1.7
SHKBP1-208ENST00000595726 KRTAP5-2Q701N4 177 aa4.3□□□□□ -1.72
SHKBP1-208ENST00000595726 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
SHKBP1-208ENST00000595726 KRTAP6-1Q3LI64 71 aa4.12□□□□□ -1.75
SHKBP1-208ENST00000595726 MT1AP04731 61 aa4.05□□□□□ -1.76
SHKBP1-208ENST00000595726 KRTAP6-2Q3LI66 62 aa4.05□□□□□ -1.76
SHKBP1-208ENST00000595726 MT3P25713 68 aa4.03□□□□□ -1.76
SHKBP1-208ENST00000595726 LUZP6Q538Z0 58 aa4.02□□□□□ -1.77
SHKBP1-208ENST00000595726 KRTAP9-6A8MVA2 160 aa4.01□□□□□ -1.77
SHKBP1-208ENST00000595726 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
SHKBP1-208ENST00000595726 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
SHKBP1-208ENST00000595726 KRTAP4-2Q9BYR5 136 aa3.59□□□□□ -1.83
SHKBP1-208ENST00000595726 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
SHKBP1-208ENST00000595726 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
SHKBP1-208ENST00000595726 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
SHKBP1-208ENST00000595726 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
SHKBP1-208ENST00000595726 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
SHKBP1-208ENST00000595726 PHGR1C9JFL3 82 aa3.16□□□□□ -1.9
SHKBP1-208ENST00000595726 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
SHKBP1-208ENST00000595726 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
SHKBP1-208ENST00000595726 INE1O15225 51 aa2.87□□□□□ -1.95
SHKBP1-208ENST00000595726 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
SHKBP1-208ENST00000595726 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
SHKBP1-208ENST00000595726 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
SHKBP1-208ENST00000595726 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
SHKBP1-208ENST00000595726 PRM1P04553 51 aa2.34□□□□□ -2.03
SHKBP1-208ENST00000595726 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms