RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 C10orf95Q9H7T3 257 aa4.07□□□□□ -1.76
SHKBP1-206ENST00000595523 LCE3BQ5TA77 95 aa4.06□□□□□ -1.76
SHKBP1-206ENST00000595523 LCE5AQ5TCM9 118 aa4.05□□□□□ -1.76
SHKBP1-206ENST00000595523 KRTAP19-5Q3LI72 72 aa4.04□□□□□ -1.76
SHKBP1-206ENST00000595523 KRTAP19-3Q7Z4W3 81 aa4.03□□□□□ -1.76
SHKBP1-206ENST00000595523 DSTQ03001 7570 aaKnown RBP4.02□□□□□ -1.77
SHKBP1-206ENST00000595523 K7ERS5 55 aa3.99□□□□□ -1.77
SHKBP1-206ENST00000595523 LCE3AQ5TA76 89 aa3.99□□□□□ -1.77
SHKBP1-206ENST00000595523 TNP1P09430 55 aa3.98□□□□□ -1.77
SHKBP1-206ENST00000595523 MT1GP13640 62 aa3.93□□□□□ -1.78
SHKBP1-206ENST00000595523 MT1LQ93083 61 aa3.93□□□□□ -1.78
SHKBP1-206ENST00000595523 MT1MQ8N339 61 aa3.9□□□□□ -1.79
SHKBP1-206ENST00000595523 PRAC1Q96KF2 57 aa3.88□□□□□ -1.79
SHKBP1-206ENST00000595523 PP632Q6XCG6 107 aa3.87□□□□□ -1.79
SHKBP1-206ENST00000595523 KRTAP25-1Q3LHN0 102 aa3.85□□□□□ -1.79
SHKBP1-206ENST00000595523 KRTAP4-3Q9BYR4 195 aa3.83□□□□□ -1.8
SHKBP1-206ENST00000595523 KRTAP12-3P60328 96 aa3.82□□□□□ -1.8
SHKBP1-206ENST00000595523 ROMO1P60602 79 aa3.82□□□□□ -1.8
SHKBP1-206ENST00000595523 KRTAP4-9Q9BYQ8 210 aa3.78□□□□□ -1.8
SHKBP1-206ENST00000595523 KRTAP4-7Q9BYR0 210 aa3.76□□□□□ -1.81
SHKBP1-206ENST00000595523 HMCN1Q96RW7 5635 aa3.72□□□□□ -1.81
SHKBP1-206ENST00000595523 LCE1DQ5T752 114 aa3.7□□□□□ -1.82
SHKBP1-206ENST00000595523 LCE4AQ5TA78 99 aa3.69□□□□□ -1.82
SHKBP1-206ENST00000595523 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
SHKBP1-206ENST00000595523 KRTAP23-1A1A580 65 aa3.66□□□□□ -1.82
SHKBP1-206ENST00000595523 MT4P47944 62 aa3.65□□□□□ -1.83
SHKBP1-206ENST00000595523 GPR98Q8WXG9 6306 aa3.64□□□□□ -1.83
SHKBP1-206ENST00000595523 KRTAP15-1Q3LI76 137 aa3.59□□□□□ -1.83
SHKBP1-206ENST00000595523 KRTAP5-5Q701N2 237 aaPredicted RBP3.59□□□□□ -1.83
SHKBP1-206ENST00000595523 KRTAP4-6Q9BYQ5 205 aa3.59□□□□□ -1.83
SHKBP1-206ENST00000595523 KRTAP19-4Q3LI73 84 aa3.56□□□□□ -1.84
SHKBP1-206ENST00000595523 AHNAK2Q8IVF2 5795 aa3.55□□□□□ -1.84
SHKBP1-206ENST00000595523 LOC100996750A0A140TA64 210 aa3.55□□□□□ -1.84
SHKBP1-206ENST00000595523 LCE3CQ5T5A8 94 aa3.53□□□□□ -1.84
SHKBP1-206ENST00000595523 H3BS24 57 aa3.49□□□□□ -1.85
SHKBP1-206ENST00000595523 KRTAP20-2Q3LI61 65 aa3.46□□□□□ -1.86
SHKBP1-206ENST00000595523 SPRR5A0A1B0GTR4 108 aa3.44□□□□□ -1.86
SHKBP1-206ENST00000595523 SYNE1Q8NF91 8797 aaKnown RBP3.43□□□□□ -1.86
SHKBP1-206ENST00000595523 KRTAP5-10Q6L8G5 202 aa3.41□□□□□ -1.86
SHKBP1-206ENST00000595523 KRTAP12-4P60329 112 aa3.4□□□□□ -1.87
SHKBP1-206ENST00000595523 KRTAP9-6A8MVA2 160 aa3.38□□□□□ -1.87
SHKBP1-206ENST00000595523 KRTAP5-3Q6L8H2 238 aa3.37□□□□□ -1.87
SHKBP1-206ENST00000595523 MT1AP04731 61 aa3.33□□□□□ -1.88
SHKBP1-206ENST00000595523 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
SHKBP1-206ENST00000595523 NDUFAF8A1L188 74 aa3.32□□□□□ -1.88
SHKBP1-206ENST00000595523 LUZP6Q538Z0 58 aa3.28□□□□□ -1.88
SHKBP1-206ENST00000595523 KRTAP5-7Q6L8G8 165 aa3.25□□□□□ -1.89
SHKBP1-206ENST00000595523 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
SHKBP1-206ENST00000595523 KRTAP9-4Q9BYQ2 154 aa3.21□□□□□ -1.9
SHKBP1-206ENST00000595523 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
SHKBP1-206ENST00000595523 A0A0A0MQY5 61 aa3.14□□□□□ -1.91
SHKBP1-206ENST00000595523 KRTAP4-11Q9BYQ6 195 aa3.13□□□□□ -1.91
SHKBP1-206ENST00000595523 OBSCNQ5VST9 7968 aa3.06□□□□□ -1.92
SHKBP1-206ENST00000595523 KRTAP5-8O75690 187 aa3.04□□□□□ -1.92
SHKBP1-206ENST00000595523 MT3P25713 68 aa3.02□□□□□ -1.93
SHKBP1-206ENST00000595523 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
SHKBP1-206ENST00000595523 INE1O15225 51 aa2.92□□□□□ -1.94
SHKBP1-206ENST00000595523 AHNAKQ09666 5890 aaKnown RBP2.9□□□□□ -1.94
SHKBP1-206ENST00000595523 MUC5ACP98088 5654 aa2.9□□□□□ -1.95
SHKBP1-206ENST00000595523 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.95
SHKBP1-206ENST00000595523 KRTAP9-9Q9BYP9 154 aa2.82□□□□□ -1.96
SHKBP1-206ENST00000595523 LCE1EQ5T753 118 aa2.77□□□□□ -1.97
SHKBP1-206ENST00000595523 KRTAP4-2Q9BYR5 136 aa2.64□□□□□ -1.99
SHKBP1-206ENST00000595523 KRTAP4-12Q9BQ66 201 aa2.62□□□□□ -1.99
SHKBP1-206ENST00000595523 LCE1BQ5T7P3 118 aa2.59□□□□□ -1.99
SHKBP1-206ENST00000595523 LCE1CQ5T751 118 aa2.58□□□□□ -2
SHKBP1-206ENST00000595523 LCE3DQ9BYE3 92 aa2.54□□□□□ -2
SHKBP1-206ENST00000595523 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
SHKBP1-206ENST00000595523 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.37□□□□□ -2.03
SHKBP1-206ENST00000595523 KRTAP5-11Q6L8G4 156 aa2.34□□□□□ -2.03
SHKBP1-206ENST00000595523 LCE1FQ5T754 118 aa2.23□□□□□ -2.05
SHKBP1-206ENST00000595523 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
SHKBP1-206ENST00000595523 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
SHKBP1-206ENST00000595523 KRTAP4-4Q9BYR3 166 aa2□□□□□ -2.09
SHKBP1-206ENST00000595523 PRM1P04553 51 aa1.94□□□□□ -2.1
SHKBP1-206ENST00000595523 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
SHKBP1-206ENST00000595523 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
SHKBP1-206ENST00000595523 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 1444.4 ms