RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 CCDC179H3BU77 68 aa3.13□□□□□ -1.91
SMG9-202ENST00000594081 KRTAP5-4Q6L8H1 288 aa3.11□□□□□ -1.91
SMG9-202ENST00000594081 A0A1B0GU69 56 aa3.1□□□□□ -1.91
SMG9-202ENST00000594081 TMEM258P61165 79 aa3.1□□□□□ -1.91
SMG9-202ENST00000594081 KRTAP13-4Q3LI77 160 aa3.1□□□□□ -1.91
SMG9-202ENST00000594081 SPRR5A0A1B0GTR4 108 aa3.09□□□□□ -1.91
SMG9-202ENST00000594081 MT1GP13640 62 aa3.09□□□□□ -1.91
SMG9-202ENST00000594081 A0A1B0GU33 70 aa3.08□□□□□ -1.92
SMG9-202ENST00000594081 PP632Q6XCG6 107 aa3.08□□□□□ -1.92
SMG9-202ENST00000594081 CAMK2N1Q7Z7J9 78 aa3.08□□□□□ -1.92
SMG9-202ENST00000594081 PRR15LQ9BU68 103 aa3.07□□□□□ -1.92
SMG9-202ENST00000594081 MT1MQ8N339 61 aa3.06□□□□□ -1.92
SMG9-202ENST00000594081 SMIM26A0A096LP01 95 aa3.04□□□□□ -1.92
SMG9-202ENST00000594081 A0A0D9SG42 100 aa3.04□□□□□ -1.92
SMG9-202ENST00000594081 SPATA8Q6RVD6 105 aa3.03□□□□□ -1.92
SMG9-202ENST00000594081 KRTAP19-5Q3LI72 72 aa3.02□□□□□ -1.93
SMG9-202ENST00000594081 SPINT4Q6UDR6 99 aa3□□□□□ -1.93
SMG9-202ENST00000594081 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
SMG9-202ENST00000594081 LINC01558Q9Y6Z2 57 aa3□□□□□ -1.93
SMG9-202ENST00000594081 KRTAP12-1P59990 96 aa2.98□□□□□ -1.93
SMG9-202ENST00000594081 MT1LQ93083 61 aa2.98□□□□□ -1.93
SMG9-202ENST00000594081 KRTAP20-2Q3LI61 65 aa2.97□□□□□ -1.93
SMG9-202ENST00000594081 A8MU10 97 aa2.94□□□□□ -1.94
SMG9-202ENST00000594081 UQCR11O14957 56 aa2.94□□□□□ -1.94
SMG9-202ENST00000594081 V9GYY9 64 aa2.94□□□□□ -1.94
SMG9-202ENST00000594081 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.89□□□□□ -1.95
SMG9-202ENST00000594081 TNP1P09430 55 aa2.87□□□□□ -1.95
SMG9-202ENST00000594081 MIR22HGQ0VDD5 57 aa2.87□□□□□ -1.95
SMG9-202ENST00000594081 Q1T7F1 81 aa2.87□□□□□ -1.95
SMG9-202ENST00000594081 KRTAP5-11Q6L8G4 156 aa2.87□□□□□ -1.95
SMG9-202ENST00000594081 K7ERS5 55 aa2.86□□□□□ -1.95
SMG9-202ENST00000594081 A0A0A0MQY5 61 aa2.85□□□□□ -1.95
SMG9-202ENST00000594081 AHNAKQ09666 5890 aaKnown RBP2.84□□□□□ -1.95
SMG9-202ENST00000594081 PSPHP1O15172 72 aa2.84□□□□□ -1.95
SMG9-202ENST00000594081 KRTAP5-5Q701N2 237 aaPredicted RBP2.84□□□□□ -1.95
SMG9-202ENST00000594081 MUC5ACP98088 5654 aa2.83□□□□□ -1.96
SMG9-202ENST00000594081 KRTAP12-4P60329 112 aa2.82□□□□□ -1.96
SMG9-202ENST00000594081 RPS28P62857 69 aaKnown RBP2.82□□□□□ -1.96
SMG9-202ENST00000594081 C10orf95Q9H7T3 257 aa2.82□□□□□ -1.96
SMG9-202ENST00000594081 SYNE1Q8NF91 8797 aaKnown RBP2.79□□□□□ -1.96
SMG9-202ENST00000594081 LCE3AQ5TA76 89 aa2.79□□□□□ -1.96
SMG9-202ENST00000594081 A6NED7 52 aa2.78□□□□□ -1.96
SMG9-202ENST00000594081 KRTAP25-1Q3LHN0 102 aa2.76□□□□□ -1.97
SMG9-202ENST00000594081 MUC5BQ9HC84 5762 aaPredicted RBP2.76□□□□□ -1.97
SMG9-202ENST00000594081 LCE1EQ5T753 118 aa2.75□□□□□ -1.97
SMG9-202ENST00000594081 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
SMG9-202ENST00000594081 PRO0628Q9UI54 55 aa2.71□□□□□ -1.98
SMG9-202ENST00000594081 CDC42SE1Q9NRR8 79 aa2.7□□□□□ -1.98
SMG9-202ENST00000594081 KRTAP12-3P60328 96 aa2.69□□□□□ -1.98
SMG9-202ENST00000594081 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
SMG9-202ENST00000594081 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
SMG9-202ENST00000594081 MT3P25713 68 aa2.63□□□□□ -1.99
SMG9-202ENST00000594081 ROMO1P60602 79 aa2.63□□□□□ -1.99
SMG9-202ENST00000594081 PMAIP1Q13794 54 aa2.59□□□□□ -1.99
SMG9-202ENST00000594081 BRK1Q8WUW1 75 aa2.59□□□□□ -1.99
SMG9-202ENST00000594081 KRTAP6-1Q3LI64 71 aa2.54□□□□□ -2
SMG9-202ENST00000594081 MT1AP04731 61 aa2.53□□□□□ -2
SMG9-202ENST00000594081 KRTAP5-1Q6L8H4 278 aa2.5□□□□□ -2.01
SMG9-202ENST00000594081 KRTAP6-2Q3LI66 62 aa2.49□□□□□ -2.01
SMG9-202ENST00000594081 KTN1-AS1Q86SY8 53 aa2.49□□□□□ -2.01
SMG9-202ENST00000594081 LCE3CQ5T5A8 94 aa2.47□□□□□ -2.01
SMG9-202ENST00000594081 KRTAP9-6A8MVA2 160 aa2.43□□□□□ -2.02
SMG9-202ENST00000594081 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
SMG9-202ENST00000594081 LCE1FQ5T754 118 aa2.37□□□□□ -2.03
SMG9-202ENST00000594081 PRAC1Q96KF2 57 aa2.37□□□□□ -2.03
SMG9-202ENST00000594081 LUZP6Q538Z0 58 aa2.25□□□□□ -2.05
SMG9-202ENST00000594081 NDUFAF8A1L188 74 aa2.13□□□□□ -2.07
SMG9-202ENST00000594081 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
SMG9-202ENST00000594081 LCE3EQ5T5B0 92 aa2.05□□□□□ -2.08
SMG9-202ENST00000594081 LCE1CQ5T751 118 aa2.05□□□□□ -2.08
SMG9-202ENST00000594081 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
SMG9-202ENST00000594081 LCE3DQ9BYE3 92 aa1.81□□□□□ -2.12
SMG9-202ENST00000594081 INE1O15225 51 aa1.77□□□□□ -2.13
SMG9-202ENST00000594081 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
SMG9-202ENST00000594081 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
SMG9-202ENST00000594081 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
SMG9-202ENST00000594081 PRM1P04553 51 aa1.33□□□□□ -2.2
SMG9-202ENST00000594081 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 147.5 ms