RNA–Protein interactions for RNA: ENST00000592870.5

PALM-209, Transcript of paralemmin, humanhuman

TSL 2

Gene PALM, Length 1,346 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALM-209ENST00000592870 SPRR2FQ96RM1 72 aa6.43□□□□□ -1.38
PALM-209ENST00000592870 A6NED7 52 aa6.42□□□□□ -1.38
PALM-209ENST00000592870 KRTAP8-1Q8IUC2 63 aa6.37□□□□□ -1.39
PALM-209ENST00000592870 SPRR2EP22531 72 aa6.35□□□□□ -1.39
PALM-209ENST00000592870 SPRR2BP35325 72 aa6.35□□□□□ -1.39
PALM-209ENST00000592870 SPRR2AP35326 72 aa6.35□□□□□ -1.39
PALM-209ENST00000592870 KRTAP10-7P60409 375 aaPredicted RBP6.34□□□□□ -1.39
PALM-209ENST00000592870 K7ERS5 55 aa6.33□□□□□ -1.4
PALM-209ENST00000592870 KRTAP2-3P0C7H8 128 aa6.31□□□□□ -1.4
PALM-209ENST00000592870 MT3P25713 68 aa6.31□□□□□ -1.4
PALM-209ENST00000592870 KRTAP2-4Q9BYR9 128 aa6.31□□□□□ -1.4
PALM-209ENST00000592870 KRTAP10-12P60413 245 aa6.3□□□□□ -1.4
PALM-209ENST00000592870 KRTAP2-2Q9BYT5 123 aa6.26□□□□□ -1.41
PALM-209ENST00000592870 C10orf95Q9H7T3 257 aa6.24□□□□□ -1.41
PALM-209ENST00000592870 CDC42SE1Q9NRR8 79 aa6.21□□□□□ -1.42
PALM-209ENST00000592870 NDUFAF8A1L188 74 aa6.18□□□□□ -1.42
PALM-209ENST00000592870 TNP1P09430 55 aa6.16□□□□□ -1.42
PALM-209ENST00000592870 SPRR2DP22532 72 aa6.13□□□□□ -1.43
PALM-209ENST00000592870 KRTAP2-1Q9BYU5 128 aa6.11□□□□□ -1.43
PALM-209ENST00000592870 KRTAP25-1Q3LHN0 102 aa6.01□□□□□ -1.45
PALM-209ENST00000592870 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.01□□□□□ -1.45
PALM-209ENST00000592870 BRK1Q8WUW1 75 aa6□□□□□ -1.45
PALM-209ENST00000592870 LCE3AQ5TA76 89 aa5.97□□□□□ -1.45
PALM-209ENST00000592870 KRTAP5-11Q6L8G4 156 aa5.97□□□□□ -1.45
PALM-209ENST00000592870 KRTAP19-7Q3SYF9 63 aa5.96□□□□□ -1.46
PALM-209ENST00000592870 ROMO1P60602 79 aa5.95□□□□□ -1.46
PALM-209ENST00000592870 KRTAP19-5Q3LI72 72 aa5.9□□□□□ -1.47
PALM-209ENST00000592870 MT1EP04732 61 aa5.88□□□□□ -1.47
PALM-209ENST00000592870 LCE1FQ5T754 118 aa5.84□□□□□ -1.47
PALM-209ENST00000592870 LCE1EQ5T753 118 aa5.81□□□□□ -1.48
PALM-209ENST00000592870 KRTAP19-3Q7Z4W3 81 aa5.81□□□□□ -1.48
PALM-209ENST00000592870 PRO0628Q9UI54 55 aa5.77□□□□□ -1.49
PALM-209ENST00000592870 DSTQ03001 7570 aaKnown RBP5.77□□□□□ -1.49
PALM-209ENST00000592870 KRTAP12-3P60328 96 aa5.75□□□□□ -1.49
PALM-209ENST00000592870 PP632Q6XCG6 107 aa5.69□□□□□ -1.5
PALM-209ENST00000592870 PMAIP1Q13794 54 aa5.67□□□□□ -1.5
PALM-209ENST00000592870 MT1LQ93083 61 aa5.67□□□□□ -1.5
PALM-209ENST00000592870 MT1GP13640 62 aa5.66□□□□□ -1.5
PALM-209ENST00000592870 GPR98Q8WXG9 6306 aa5.64□□□□□ -1.51
PALM-209ENST00000592870 MT1MQ8N339 61 aa5.59□□□□□ -1.51
PALM-209ENST00000592870 KRTAP4-3Q9BYR4 195 aa5.52□□□□□ -1.53
PALM-209ENST00000592870 LCE3CQ5T5A8 94 aa5.45□□□□□ -1.54
PALM-209ENST00000592870 HMCN1Q96RW7 5635 aa5.45□□□□□ -1.54
PALM-209ENST00000592870 MT4P47944 62 aa5.39□□□□□ -1.55
PALM-209ENST00000592870 KRTAP5-4Q6L8H1 288 aa5.39□□□□□ -1.55
PALM-209ENST00000592870 KTN1-AS1Q86SY8 53 aa5.39□□□□□ -1.55
PALM-209ENST00000592870 AHNAK2Q8IVF2 5795 aa5.29□□□□□ -1.56
PALM-209ENST00000592870 KRTAP5-1Q6L8H4 278 aa5.21□□□□□ -1.58
PALM-209ENST00000592870 KRTAP5-5Q701N2 237 aaPredicted RBP5.17□□□□□ -1.58
PALM-209ENST00000592870 KRTAP5-10Q6L8G5 202 aa5.14□□□□□ -1.59
PALM-209ENST00000592870 KRTAP9-6A8MVA2 160 aa5.07□□□□□ -1.6
PALM-209ENST00000592870 KRTAP20-2Q3LI61 65 aa5.06□□□□□ -1.6
PALM-209ENST00000592870 SYNE1Q8NF91 8797 aaKnown RBP5.01□□□□□ -1.61
PALM-209ENST00000592870 SPRR5A0A1B0GTR4 108 aa4.99□□□□□ -1.61
PALM-209ENST00000592870 LCE3EQ5T5B0 92 aa4.97□□□□□ -1.61
PALM-209ENST00000592870 KRTAP4-4Q9BYR3 166 aa4.97□□□□□ -1.61
PALM-209ENST00000592870 KRTAP12-4P60329 112 aa4.95□□□□□ -1.62
PALM-209ENST00000592870 KRTAP5-7Q6L8G8 165 aa4.92□□□□□ -1.62
PALM-209ENST00000592870 MT1AP04731 61 aa4.82□□□□□ -1.64
PALM-209ENST00000592870 KRTAP6-1Q3LI64 71 aa4.77□□□□□ -1.65
PALM-209ENST00000592870 KRTAP5-2Q701N4 177 aa4.72□□□□□ -1.65
PALM-209ENST00000592870 OBSCNQ5VST9 7968 aa4.56□□□□□ -1.68
PALM-209ENST00000592870 KRTAP6-2Q3LI66 62 aa4.54□□□□□ -1.68
PALM-209ENST00000592870 KRTAP5-8O75690 187 aa4.5□□□□□ -1.69
PALM-209ENST00000592870 LUZP6Q538Z0 58 aa4.46□□□□□ -1.7
PALM-209ENST00000592870 AHNAKQ09666 5890 aaKnown RBP4.39□□□□□ -1.71
PALM-209ENST00000592870 MUC5BQ9HC84 5762 aaPredicted RBP4.37□□□□□ -1.71
PALM-209ENST00000592870 MUC5ACP98088 5654 aa4.34□□□□□ -1.72
PALM-209ENST00000592870 LCE3DQ9BYE3 92 aa4.2□□□□□ -1.74
PALM-209ENST00000592870 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
PALM-209ENST00000592870 LCE1BQ5T7P3 118 aa3.79□□□□□ -1.8
PALM-209ENST00000592870 INE1O15225 51 aa3.43□□□□□ -1.86
PALM-209ENST00000592870 KRTAP21-2Q3LI59 83 aa3.16□□□□□ -1.9
PALM-209ENST00000592870 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
PALM-209ENST00000592870 PRM1P04553 51 aa3.06□□□□□ -1.92
PALM-209ENST00000592870 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
PALM-209ENST00000592870 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
PALM-209ENST00000592870 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms