RNA–Protein interactions for RNA: ENST00000592706.5

GFAP-223, Transcript of glial fibrillary acidic protein, humanhuman

TSL 4

Gene GFAP, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-223ENST00000592706 KRTAP19-3Q7Z4W3 81 aa3.82□□□□□ -1.8
GFAP-223ENST00000592706 KRTAP19-5Q3LI72 72 aa3.79□□□□□ -1.8
GFAP-223ENST00000592706 TNP1P09430 55 aa3.76□□□□□ -1.81
GFAP-223ENST00000592706 ROMO1P60602 79 aa3.75□□□□□ -1.81
GFAP-223ENST00000592706 PRO0628Q9UI54 55 aa3.74□□□□□ -1.81
GFAP-223ENST00000592706 MT1GP13640 62 aa3.72□□□□□ -1.81
GFAP-223ENST00000592706 LCE3AQ5TA76 89 aa3.72□□□□□ -1.81
GFAP-223ENST00000592706 PP632Q6XCG6 107 aa3.72□□□□□ -1.81
GFAP-223ENST00000592706 GPR98Q8WXG9 6306 aa3.71□□□□□ -1.82
GFAP-223ENST00000592706 DSTQ03001 7570 aaKnown RBP3.68□□□□□ -1.82
GFAP-223ENST00000592706 PMAIP1Q13794 54 aa3.68□□□□□ -1.82
GFAP-223ENST00000592706 KRTAP25-1Q3LHN0 102 aa3.68□□□□□ -1.82
GFAP-223ENST00000592706 MT1LQ93083 61 aa3.68□□□□□ -1.82
GFAP-223ENST00000592706 MT1MQ8N339 61 aa3.67□□□□□ -1.82
GFAP-223ENST00000592706 PRAC1Q96KF2 57 aa3.61□□□□□ -1.83
GFAP-223ENST00000592706 KRTAP4-9Q9BYQ8 210 aa3.59□□□□□ -1.83
GFAP-223ENST00000592706 KRTAP12-3P60328 96 aa3.58□□□□□ -1.84
GFAP-223ENST00000592706 LCE4AQ5TA78 99 aa3.56□□□□□ -1.84
GFAP-223ENST00000592706 KRTAP4-3Q9BYR4 195 aa3.55□□□□□ -1.84
GFAP-223ENST00000592706 LCE1DQ5T752 114 aa3.54□□□□□ -1.84
GFAP-223ENST00000592706 HMCN1Q96RW7 5635 aa3.53□□□□□ -1.84
GFAP-223ENST00000592706 KRTAP23-1A1A580 65 aa3.51□□□□□ -1.85
GFAP-223ENST00000592706 KTN1-AS1Q86SY8 53 aa3.5□□□□□ -1.85
GFAP-223ENST00000592706 MT4P47944 62 aa3.48□□□□□ -1.85
GFAP-223ENST00000592706 KRTAP5-4Q6L8H1 288 aa3.48□□□□□ -1.85
GFAP-223ENST00000592706 KRTAP4-7Q9BYR0 210 aa3.48□□□□□ -1.85
GFAP-223ENST00000592706 AHNAK2Q8IVF2 5795 aa3.44□□□□□ -1.86
GFAP-223ENST00000592706 LOC100996750A0A140TA64 210 aa3.41□□□□□ -1.86
GFAP-223ENST00000592706 KRTAP19-4Q3LI73 84 aa3.41□□□□□ -1.86
GFAP-223ENST00000592706 KRTAP4-6Q9BYQ5 205 aa3.41□□□□□ -1.86
GFAP-223ENST00000592706 KRTAP15-1Q3LI76 137 aa3.38□□□□□ -1.87
GFAP-223ENST00000592706 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
GFAP-223ENST00000592706 SVIPQ8NHG7 77 aa3.31□□□□□ -1.88
GFAP-223ENST00000592706 LCE3CQ5T5A8 94 aa3.3□□□□□ -1.88
GFAP-223ENST00000592706 SPRR5A0A1B0GTR4 108 aa3.29□□□□□ -1.88
GFAP-223ENST00000592706 KRTAP20-2Q3LI61 65 aa3.29□□□□□ -1.88
GFAP-223ENST00000592706 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
GFAP-223ENST00000592706 KRTAP5-10Q6L8G5 202 aa3.27□□□□□ -1.89
GFAP-223ENST00000592706 KRTAP9-6A8MVA2 160 aa3.2□□□□□ -1.9
GFAP-223ENST00000592706 KRTAP5-3Q6L8H2 238 aa3.2□□□□□ -1.9
GFAP-223ENST00000592706 KRTAP5-7Q6L8G8 165 aa3.17□□□□□ -1.9
GFAP-223ENST00000592706 SYNE1Q8NF91 8797 aaKnown RBP3.15□□□□□ -1.9
GFAP-223ENST00000592706 MT1AP04731 61 aa3.14□□□□□ -1.91
GFAP-223ENST00000592706 KRTAP6-1Q3LI64 71 aa3.11□□□□□ -1.91
GFAP-223ENST00000592706 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
GFAP-223ENST00000592706 KRTAP9-4Q9BYQ2 154 aa3.02□□□□□ -1.93
GFAP-223ENST00000592706 KRTAP4-11Q9BYQ6 195 aa2.99□□□□□ -1.93
GFAP-223ENST00000592706 KRTAP6-2Q3LI66 62 aa2.96□□□□□ -1.94
GFAP-223ENST00000592706 KRTAP5-8O75690 187 aa2.88□□□□□ -1.95
GFAP-223ENST00000592706 MT3P25713 68 aa2.87□□□□□ -1.95
GFAP-223ENST00000592706 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
GFAP-223ENST00000592706 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
GFAP-223ENST00000592706 MUC5ACP98088 5654 aa2.79□□□□□ -1.96
GFAP-223ENST00000592706 LUZP6Q538Z0 58 aa2.76□□□□□ -1.97
GFAP-223ENST00000592706 OBSCNQ5VST9 7968 aa2.76□□□□□ -1.97
GFAP-223ENST00000592706 KRTAP9-9Q9BYP9 154 aa2.75□□□□□ -1.97
GFAP-223ENST00000592706 KRTAP5-1Q6L8H4 278 aa2.73□□□□□ -1.97
GFAP-223ENST00000592706 NDUFAF8A1L188 74 aa2.71□□□□□ -1.98
GFAP-223ENST00000592706 LCE1EQ5T753 118 aa2.64□□□□□ -1.99
GFAP-223ENST00000592706 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
GFAP-223ENST00000592706 KRTAP4-12Q9BQ66 201 aa2.47□□□□□ -2.01
GFAP-223ENST00000592706 LCE1BQ5T7P3 118 aa2.46□□□□□ -2.02
GFAP-223ENST00000592706 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
GFAP-223ENST00000592706 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
GFAP-223ENST00000592706 LCE3EQ5T5B0 92 aa2.31□□□□□ -2.04
GFAP-223ENST00000592706 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
GFAP-223ENST00000592706 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
GFAP-223ENST00000592706 A0A0A0MQY5 61 aa2.2□□□□□ -2.06
GFAP-223ENST00000592706 LCE1FQ5T754 118 aa2.15□□□□□ -2.07
GFAP-223ENST00000592706 INE1O15225 51 aa2.12□□□□□ -2.07
GFAP-223ENST00000592706 H3BS24 57 aa2.05□□□□□ -2.08
GFAP-223ENST00000592706 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
GFAP-223ENST00000592706 PRM1P04553 51 aa1.99□□□□□ -2.09
GFAP-223ENST00000592706 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
GFAP-223ENST00000592706 KRTAP4-4Q9BYR3 166 aa1.85□□□□□ -2.11
GFAP-223ENST00000592706 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
GFAP-223ENST00000592706 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
GFAP-223ENST00000592706 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 61 ms