RNA–Protein interactions for RNA: ENST00000592320.6

GFAP-222, Transcript of glial fibrillary acidic protein, human

TSL 5

Gene GFAP, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GFAP-222	ENST00000592320	GPR98	Q8WXG9	6306 aa		4.63	□□□□□ -1.67
GFAP-222	ENST00000592320	LCE3A	Q5TA76	89 aa		4.56	□□□□□ -1.68
GFAP-222	ENST00000592320	KRTAP23-1	A1A580	65 aa		4.48	□□□□□ -1.69
GFAP-222	ENST00000592320	KRTAP19-5	Q3LI72	72 aa		4.48	□□□□□ -1.69
GFAP-222	ENST00000592320	KRTAP19-7	Q3SYF9	63 aa		4.48	□□□□□ -1.69
GFAP-222	ENST00000592320	PRO0628	Q9UI54	55 aa		4.48	□□□□□ -1.69
GFAP-222	ENST00000592320	PMAIP1	Q13794	54 aa		4.47	□□□□□ -1.69
GFAP-222	ENST00000592320	KRTAP4-9	Q9BYQ8	210 aa		4.46	□□□□□ -1.7
GFAP-222	ENST00000592320	MT1E	P04732	61 aa		4.44	□□□□□ -1.7
GFAP-222	ENST00000592320	PP632	Q6XCG6	107 aa		4.42	□□□□□ -1.7
GFAP-222	ENST00000592320	DST	Q03001	7570 aa	Known RBP	4.4	□□□□□ -1.71
GFAP-222	ENST00000592320	KRTAP12-3	P60328	96 aa		4.39	□□□□□ -1.71
GFAP-222	ENST00000592320	KRTAP19-3	Q7Z4W3	81 aa		4.32	□□□□□ -1.72
GFAP-222	ENST00000592320	LCE1D	Q5T752	114 aa		4.3	□□□□□ -1.72
GFAP-222	ENST00000592320	MT1L	Q93083	61 aa		4.3	□□□□□ -1.72
GFAP-222	ENST00000592320	LCE5A	Q5TCM9	118 aa		4.27	□□□□□ -1.73
GFAP-222	ENST00000592320	MT1G	P13640	62 aa		4.26	□□□□□ -1.73
GFAP-222	ENST00000592320	KRTAP15-1	Q3LI76	137 aa		4.23	□□□□□ -1.73
GFAP-222	ENST00000592320	PRAC1	Q96KF2	57 aa		4.22	□□□□□ -1.73
GFAP-222	ENST00000592320	KRTAP5-10	Q6L8G5	202 aa		4.21	□□□□□ -1.74
GFAP-222	ENST00000592320	MT4	P47944	62 aa		4.2	□□□□□ -1.74
GFAP-222	ENST00000592320	KTN1-AS1	Q86SY8	53 aa		4.2	□□□□□ -1.74
GFAP-222	ENST00000592320	MT1M	Q8N339	61 aa		4.2	□□□□□ -1.74
GFAP-222	ENST00000592320	KRTAP19-4	Q3LI73	84 aa		4.17	□□□□□ -1.74
GFAP-222	ENST00000592320	HMCN1	Q96RW7	5635 aa		4.17	□□□□□ -1.74
GFAP-222	ENST00000592320	LCE4A	Q5TA78	99 aa		4.16	□□□□□ -1.74
GFAP-222	ENST00000592320	AHNAK2	Q8IVF2	5795 aa		4.13	□□□□□ -1.75
GFAP-222	ENST00000592320	KRTAP5-7	Q6L8G8	165 aa		4.12	□□□□□ -1.75
GFAP-222	ENST00000592320	KRTAP4-7	Q9BYR0	210 aa		4.09	□□□□□ -1.75
GFAP-222	ENST00000592320	LCE3C	Q5T5A8	94 aa		4.07	□□□□□ -1.76
GFAP-222	ENST00000592320	KRTAP4-3	Q9BYR4	195 aa		4.06	□□□□□ -1.76
GFAP-222	ENST00000592320	SPRR5	A0A1B0GTR4	108 aa		4.01	□□□□□ -1.77
GFAP-222	ENST00000592320	KRTAP5-3	Q6L8H2	238 aa		4.01	□□□□□ -1.77
GFAP-222	ENST00000592320	KRTAP4-6	Q9BYQ5	205 aa		4.01	□□□□□ -1.77
GFAP-222	ENST00000592320	KRTAP5-4	Q6L8H1	288 aa		3.98	□□□□□ -1.77
GFAP-222	ENST00000592320	SVIP	Q8NHG7	77 aa		3.98	□□□□□ -1.77
GFAP-222	ENST00000592320	LOC100996750	A0A140TA64	210 aa		3.86	□□□□□ -1.79
GFAP-222	ENST00000592320	KRTAP9-6	A8MVA2	160 aa		3.82	□□□□□ -1.8
GFAP-222	ENST00000592320	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.81	□□□□□ -1.8
GFAP-222	ENST00000592320	KRTAP20-2	Q3LI61	65 aa		3.8	□□□□□ -1.8
GFAP-222	ENST00000592320	MT1A	P04731	61 aa		3.67	□□□□□ -1.82
GFAP-222	ENST00000592320	SYNE1	Q8NF91	8797 aa	Known RBP	3.66	□□□□□ -1.82
GFAP-222	ENST00000592320	KRTAP12-4	P60329	112 aa		3.66	□□□□□ -1.82
GFAP-222	ENST00000592320	KRTAP6-1	Q3LI64	71 aa		3.62	□□□□□ -1.83
GFAP-222	ENST00000592320	KRTAP4-11	Q9BYQ6	195 aa		3.59	□□□□□ -1.83
GFAP-222	ENST00000592320	MUC5AC	P98088	5654 aa		3.52	□□□□□ -1.85
GFAP-222	ENST00000592320	AHNAK	Q09666	5890 aa	Known RBP	3.52	□□□□□ -1.85
GFAP-222	ENST00000592320	LUZP6	Q538Z0	58 aa		3.51	□□□□□ -1.85
GFAP-222	ENST00000592320	KRTAP5-8	O75690	187 aa		3.5	□□□□□ -1.85
GFAP-222	ENST00000592320	KRTAP9-4	Q9BYQ2	154 aa		3.49	□□□□□ -1.85
GFAP-222	ENST00000592320	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.46	□□□□□ -1.86
GFAP-222	ENST00000592320	KRTAP5-2	Q701N4	177 aa		3.4	□□□□□ -1.87
GFAP-222	ENST00000592320	KRTAP9-9	Q9BYP9	154 aa		3.39	□□□□□ -1.87
GFAP-222	ENST00000592320	KRTAP6-2	Q3LI66	62 aa		3.38	□□□□□ -1.87
GFAP-222	ENST00000592320	MT3	P25713	68 aa		3.34	□□□□□ -1.87
GFAP-222	ENST00000592320	OBSCN	Q5VST9	7968 aa		3.23	□□□□□ -1.89
GFAP-222	ENST00000592320	NDUFAF8	A1L188	74 aa		3.19	□□□□□ -1.9
GFAP-222	ENST00000592320	KRTAP5-1	Q6L8H4	278 aa		3.15	□□□□□ -1.91
GFAP-222	ENST00000592320	LCE3D	Q9BYE3	92 aa		3.02	□□□□□ -1.93
GFAP-222	ENST00000592320	LCE1E	Q5T753	118 aa		2.97	□□□□□ -1.93
GFAP-222	ENST00000592320	LCE3E	Q5T5B0	92 aa		2.9	□□□□□ -1.95
GFAP-222	ENST00000592320	LCE1B	Q5T7P3	118 aa		2.77	□□□□□ -1.97
GFAP-222	ENST00000592320	LCE1C	Q5T751	118 aa		2.76	□□□□□ -1.97
GFAP-222	ENST00000592320	KRTAP4-2	Q9BYR5	136 aa		2.76	□□□□□ -1.97
GFAP-222	ENST00000592320		A0A0A0MQY5	61 aa		2.74	□□□□□ -1.97
GFAP-222	ENST00000592320	KRTAP4-12	Q9BQ66	201 aa		2.66	□□□□□ -1.98
GFAP-222	ENST00000592320	INE1	O15225	51 aa		2.64	□□□□□ -1.99
GFAP-222	ENST00000592320	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.55	□□□□□ -2
GFAP-222	ENST00000592320	KRTAP5-11	Q6L8G4	156 aa		2.51	□□□□□ -2.01
GFAP-222	ENST00000592320	PHGR1	C9JFL3	82 aa		2.49	□□□□□ -2.01
GFAP-222	ENST00000592320	LCE1F	Q5T754	118 aa		2.47	□□□□□ -2.01
GFAP-222	ENST00000592320	PRM1	P04553	51 aa		2.39	□□□□□ -2.03
GFAP-222	ENST00000592320	KRTAP21-2	Q3LI59	83 aa		2.37	□□□□□ -2.03
GFAP-222	ENST00000592320		H3BS24	57 aa		2.25	□□□□□ -2.05
GFAP-222	ENST00000592320	KRTAP4-4	Q9BYR3	166 aa		2.11	□□□□□ -2.07
GFAP-222	ENST00000592320	MUC19	Q7Z5P9	8384 aa		1.99	□□□□□ -2.09
GFAP-222	ENST00000592320	KRTAP21-1	Q3LI58	79 aa		1.9	□□□□□ -2.11
GFAP-222	ENST00000592320	MUC16	Q8WXI7	14507 aa		1.41	□□□□□ -2.18

Retrieved 78 of 20,778 RNA–protein pairs in 44.5 ms