RNA–Protein interactions for RNA: ENST00000592250.5

SDF2-210, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,025 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-210ENST00000592250 KRTAP19-6Q3LI70 58 aa3.41□□□□□ -1.86
SDF2-210ENST00000592250 KRTAP12-2P59991 146 aa3.4□□□□□ -1.87
SDF2-210ENST00000592250 NEBP20929 6669 aa3.39□□□□□ -1.87
SDF2-210ENST00000592250 MT1BP07438 61 aa3.39□□□□□ -1.87
SDF2-210ENST00000592250 KRTAP20-1Q3LI63 56 aa3.39□□□□□ -1.87
SDF2-210ENST00000592250 PRO0628Q9UI54 55 aa3.39□□□□□ -1.87
SDF2-210ENST00000592250 LINC01554Q52M75 96 aa3.38□□□□□ -1.87
SDF2-210ENST00000592250 SPINT4Q6UDR6 99 aa3.34□□□□□ -1.87
SDF2-210ENST00000592250 MUC12Q9UKN1 5478 aa3.31□□□□□ -1.88
SDF2-210ENST00000592250 K7ERS5 55 aa3.3□□□□□ -1.88
SDF2-210ENST00000592250 PLAC4Q8WY50 150 aa3.29□□□□□ -1.88
SDF2-210ENST00000592250 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
SDF2-210ENST00000592250 PMAIP1Q13794 54 aa3.27□□□□□ -1.89
SDF2-210ENST00000592250 KRTAP5-4Q6L8H1 288 aa3.27□□□□□ -1.89
SDF2-210ENST00000592250 MT1XP80297 61 aa3.26□□□□□ -1.89
SDF2-210ENST00000592250 C10orf95Q9H7T3 257 aa3.26□□□□□ -1.89
SDF2-210ENST00000592250 CAMK2N1Q7Z7J9 78 aa3.23□□□□□ -1.89
SDF2-210ENST00000592250 ROMO1P60602 79 aa3.22□□□□□ -1.89
SDF2-210ENST00000592250 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
SDF2-210ENST00000592250 KRTAP2-3P0C7H8 128 aa3.18□□□□□ -1.9
SDF2-210ENST00000592250 KRTAP2-4Q9BYR9 128 aa3.18□□□□□ -1.9
SDF2-210ENST00000592250 MDN1Q9NU22 5596 aa3.18□□□□□ -1.9
SDF2-210ENST00000592250 KMT2DO14686 5537 aa3.16□□□□□ -1.9
SDF2-210ENST00000592250 KRTAP5-9P26371 169 aa3.16□□□□□ -1.9
SDF2-210ENST00000592250 PRO2289Q9P1D8 64 aa3.16□□□□□ -1.9
SDF2-210ENST00000592250 KRTAP25-1Q3LHN0 102 aa3.13□□□□□ -1.91
SDF2-210ENST00000592250 KTN1-AS1Q86SY8 53 aa3.13□□□□□ -1.91
SDF2-210ENST00000592250 SPRR2EP22531 72 aa3.11□□□□□ -1.91
SDF2-210ENST00000592250 SPRR2BP35325 72 aa3.11□□□□□ -1.91
SDF2-210ENST00000592250 SPRR2AP35326 72 aa3.11□□□□□ -1.91
SDF2-210ENST00000592250 TNP1P09430 55 aa3.1□□□□□ -1.91
SDF2-210ENST00000592250 SPRR2FQ96RM1 72 aa3.08□□□□□ -1.92
SDF2-210ENST00000592250 KRTAP2-1Q9BYU5 128 aa3.06□□□□□ -1.92
SDF2-210ENST00000592250 GPR98Q8WXG9 6306 aa3.04□□□□□ -1.92
SDF2-210ENST00000592250 OBSCNQ5VST9 7968 aa3.03□□□□□ -1.92
SDF2-210ENST00000592250 LCE3AQ5TA76 89 aa3.02□□□□□ -1.93
SDF2-210ENST00000592250 SPRR2DP22532 72 aa3□□□□□ -1.93
SDF2-210ENST00000592250 PP632Q6XCG6 107 aa3□□□□□ -1.93
SDF2-210ENST00000592250 KRTAP8-1Q8IUC2 63 aa2.99□□□□□ -1.93
SDF2-210ENST00000592250 KRTAP4-3Q9BYR4 195 aa2.94□□□□□ -1.94
SDF2-210ENST00000592250 KRTAP19-7Q3SYF9 63 aa2.92□□□□□ -1.94
SDF2-210ENST00000592250 KRTAP19-5Q3LI72 72 aa2.91□□□□□ -1.94
SDF2-210ENST00000592250 KRTAP12-3P60328 96 aa2.89□□□□□ -1.95
SDF2-210ENST00000592250 MT1EP04732 61 aa2.85□□□□□ -1.95
SDF2-210ENST00000592250 MT1LQ93083 61 aa2.79□□□□□ -1.96
SDF2-210ENST00000592250 KRTAP5-5Q701N2 237 aaPredicted RBP2.78□□□□□ -1.96
SDF2-210ENST00000592250 KRTAP19-3Q7Z4W3 81 aa2.76□□□□□ -1.97
SDF2-210ENST00000592250 DSTQ03001 7570 aaKnown RBP2.75□□□□□ -1.97
SDF2-210ENST00000592250 SPRR5A0A1B0GTR4 108 aa2.72□□□□□ -1.97
SDF2-210ENST00000592250 MT1GP13640 62 aa2.71□□□□□ -1.98
SDF2-210ENST00000592250 MT1MQ8N339 61 aa2.69□□□□□ -1.98
SDF2-210ENST00000592250 MT4P47944 62 aa2.68□□□□□ -1.98
SDF2-210ENST00000592250 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
SDF2-210ENST00000592250 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
SDF2-210ENST00000592250 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
SDF2-210ENST00000592250 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
SDF2-210ENST00000592250 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
SDF2-210ENST00000592250 KRTAP5-10Q6L8G5 202 aa2.61□□□□□ -1.99
SDF2-210ENST00000592250 LCE3DQ9BYE3 92 aa2.58□□□□□ -2
SDF2-210ENST00000592250 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
SDF2-210ENST00000592250 LUZP6Q538Z0 58 aa2.46□□□□□ -2.02
SDF2-210ENST00000592250 SYNE1Q8NF91 8797 aaKnown RBP2.39□□□□□ -2.03
SDF2-210ENST00000592250 MT1AP04731 61 aa2.37□□□□□ -2.03
SDF2-210ENST00000592250 KRTAP20-2Q3LI61 65 aa2.37□□□□□ -2.03
SDF2-210ENST00000592250 KRTAP6-1Q3LI64 71 aa2.35□□□□□ -2.03
SDF2-210ENST00000592250 KRTAP12-4P60329 112 aa2.3□□□□□ -2.04
SDF2-210ENST00000592250 AHNAKQ09666 5890 aaKnown RBP2.25□□□□□ -2.05
SDF2-210ENST00000592250 MUC5ACP98088 5654 aa2.21□□□□□ -2.06
SDF2-210ENST00000592250 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.06
SDF2-210ENST00000592250 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
SDF2-210ENST00000592250 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
SDF2-210ENST00000592250 KRTAP6-2Q3LI66 62 aa2.15□□□□□ -2.07
SDF2-210ENST00000592250 INE1O15225 51 aa2□□□□□ -2.09
SDF2-210ENST00000592250 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
SDF2-210ENST00000592250 PRM1P04553 51 aa1.67□□□□□ -2.14
SDF2-210ENST00000592250 PHGR1C9JFL3 82 aa1.59□□□□□ -2.15
SDF2-210ENST00000592250 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
SDF2-210ENST00000592250 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 84.3 ms