RNA–Protein interactions for RNA: ENST00000592083.5

ERCC1-214, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-214ENST00000592083 UQCR11O14957 56 aa5.45□□□□□ -1.54
ERCC1-214ENST00000592083 LCE4AQ5TA78 99 aa5.45□□□□□ -1.54
ERCC1-214ENST00000592083 Q1T7F1 81 aa5.4□□□□□ -1.54
ERCC1-214ENST00000592083 V9GYY9 64 aa5.4□□□□□ -1.54
ERCC1-214ENST00000592083 MT1GP13640 62 aa5.39□□□□□ -1.55
ERCC1-214ENST00000592083 C10orf95Q9H7T3 257 aa5.37□□□□□ -1.55
ERCC1-214ENST00000592083 LCE3AQ5TA76 89 aa5.35□□□□□ -1.55
ERCC1-214ENST00000592083 KRTAP4-6Q9BYQ5 205 aa5.35□□□□□ -1.55
ERCC1-214ENST00000592083 PSPHP1O15172 72 aa5.34□□□□□ -1.55
ERCC1-214ENST00000592083 MIR22HGQ0VDD5 57 aa5.34□□□□□ -1.55
ERCC1-214ENST00000592083 PP632Q6XCG6 107 aa5.33□□□□□ -1.56
ERCC1-214ENST00000592083 MT1LQ93083 61 aa5.33□□□□□ -1.56
ERCC1-214ENST00000592083 TNP1P09430 55 aa5.32□□□□□ -1.56
ERCC1-214ENST00000592083 KRTAP5-7Q6L8G8 165 aa5.32□□□□□ -1.56
ERCC1-214ENST00000592083 MT1MQ8N339 61 aa5.32□□□□□ -1.56
ERCC1-214ENST00000592083 KRTAP5-4Q6L8H1 288 aa5.27□□□□□ -1.57
ERCC1-214ENST00000592083 KRTAP4-3Q9BYR4 195 aa5.26□□□□□ -1.57
ERCC1-214ENST00000592083 KRTAP5-3Q6L8H2 238 aa5.25□□□□□ -1.57
ERCC1-214ENST00000592083 SPRR5A0A1B0GTR4 108 aa5.18□□□□□ -1.58
ERCC1-214ENST00000592083 K7ERS5 55 aa5.18□□□□□ -1.58
ERCC1-214ENST00000592083 A6NED7 52 aa5.16□□□□□ -1.58
ERCC1-214ENST00000592083 KRTAP12-3P60328 96 aa5.12□□□□□ -1.59
ERCC1-214ENST00000592083 KRTAP4-7Q9BYR0 210 aa5.12□□□□□ -1.59
ERCC1-214ENST00000592083 KRTAP25-1Q3LHN0 102 aa5.09□□□□□ -1.59
ERCC1-214ENST00000592083 KRTAP20-2Q3LI61 65 aa5.02□□□□□ -1.61
ERCC1-214ENST00000592083 CDC42SE1Q9NRR8 79 aa4.98□□□□□ -1.61
ERCC1-214ENST00000592083 KRTAP23-1A1A580 65 aa4.94□□□□□ -1.62
ERCC1-214ENST00000592083 BRK1Q8WUW1 75 aa4.91□□□□□ -1.62
ERCC1-214ENST00000592083 ROMO1P60602 79 aa4.89□□□□□ -1.63
ERCC1-214ENST00000592083 PRO0628Q9UI54 55 aa4.88□□□□□ -1.63
ERCC1-214ENST00000592083 LOC100996750A0A140TA64 210 aa4.86□□□□□ -1.63
ERCC1-214ENST00000592083 KRTAP5-5Q701N2 237 aaPredicted RBP4.86□□□□□ -1.63
ERCC1-214ENST00000592083 SYNE1Q8NF91 8797 aaKnown RBP4.84□□□□□ -1.64
ERCC1-214ENST00000592083 KRTAP12-4P60329 112 aa4.82□□□□□ -1.64
ERCC1-214ENST00000592083 KRTAP19-4Q3LI73 84 aa4.77□□□□□ -1.65
ERCC1-214ENST00000592083 KRTAP15-1Q3LI76 137 aa4.77□□□□□ -1.65
ERCC1-214ENST00000592083 KRTAP4-11Q9BYQ6 195 aa4.72□□□□□ -1.65
ERCC1-214ENST00000592083 LCE3CQ5T5A8 94 aa4.71□□□□□ -1.66
ERCC1-214ENST00000592083 AHNAKQ09666 5890 aaKnown RBP4.68□□□□□ -1.66
ERCC1-214ENST00000592083 PMAIP1Q13794 54 aa4.67□□□□□ -1.66
ERCC1-214ENST00000592083 MUC5ACP98088 5654 aa4.65□□□□□ -1.67
ERCC1-214ENST00000592083 KRTAP5-8O75690 187 aa4.6□□□□□ -1.67
ERCC1-214ENST00000592083 MUC5BQ9HC84 5762 aaPredicted RBP4.59□□□□□ -1.67
ERCC1-214ENST00000592083 KRTAP6-1Q3LI64 71 aa4.53□□□□□ -1.68
ERCC1-214ENST00000592083 SVIPQ8NHG7 77 aa4.53□□□□□ -1.68
ERCC1-214ENST00000592083 MT1AP04731 61 aa4.52□□□□□ -1.69
ERCC1-214ENST00000592083 KRTAP5-2Q701N4 177 aa4.52□□□□□ -1.69
ERCC1-214ENST00000592083 KTN1-AS1Q86SY8 53 aa4.5□□□□□ -1.69
ERCC1-214ENST00000592083 KRTAP9-6A8MVA2 160 aa4.48□□□□□ -1.69
ERCC1-214ENST00000592083 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
ERCC1-214ENST00000592083 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
ERCC1-214ENST00000592083 KRTAP9-4Q9BYQ2 154 aa4.38□□□□□ -1.71
ERCC1-214ENST00000592083 KRTAP6-2Q3LI66 62 aa4.34□□□□□ -1.71
ERCC1-214ENST00000592083 PRAC1Q96KF2 57 aa4.32□□□□□ -1.72
ERCC1-214ENST00000592083 KRTAP5-1Q6L8H4 278 aa4.17□□□□□ -1.74
ERCC1-214ENST00000592083 MT3P25713 68 aa4.13□□□□□ -1.75
ERCC1-214ENST00000592083 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
ERCC1-214ENST00000592083 LCE1BQ5T7P3 118 aa3.67□□□□□ -1.82
ERCC1-214ENST00000592083 KRTAP4-2Q9BYR5 136 aa3.66□□□□□ -1.82
ERCC1-214ENST00000592083 LUZP6Q538Z0 58 aa3.58□□□□□ -1.84
ERCC1-214ENST00000592083 KRTAP4-12Q9BQ66 201 aa3.58□□□□□ -1.84
ERCC1-214ENST00000592083 LCE1CQ5T751 118 aa3.52□□□□□ -1.85
ERCC1-214ENST00000592083 NDUFAF8A1L188 74 aa3.46□□□□□ -1.86
ERCC1-214ENST00000592083 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
ERCC1-214ENST00000592083 KRTAP5-11Q6L8G4 156 aa3.29□□□□□ -1.88
ERCC1-214ENST00000592083 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
ERCC1-214ENST00000592083 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
ERCC1-214ENST00000592083 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
ERCC1-214ENST00000592083 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
ERCC1-214ENST00000592083 A0A0A0MQY5 61 aa3.1□□□□□ -1.91
ERCC1-214ENST00000592083 H3BS24 57 aa3.05□□□□□ -1.92
ERCC1-214ENST00000592083 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
ERCC1-214ENST00000592083 INE1O15225 51 aa2.95□□□□□ -1.94
ERCC1-214ENST00000592083 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
ERCC1-214ENST00000592083 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
ERCC1-214ENST00000592083 PRM1P04553 51 aa2.51□□□□□ -2.01
ERCC1-214ENST00000592083 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
ERCC1-214ENST00000592083 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 82 ms