RNA–Protein interactions for RNA: ENST00000591749.1

LAMA3-212, Transcript of laminin subunit alpha 3, humanhuman

TSL 4

Gene LAMA3, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-212ENST00000591749 KRTAP5-10Q6L8G5 202 aa4.32□□□□□ -1.72
LAMA3-212ENST00000591749 MT1LQ93083 61 aa4.31□□□□□ -1.72
LAMA3-212ENST00000591749 KRTAP5-4Q6L8H1 288 aa4.3□□□□□ -1.72
LAMA3-212ENST00000591749 ATP5EP56381 51 aaPredicted RBP4.29□□□□□ -1.72
LAMA3-212ENST00000591749 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
LAMA3-212ENST00000591749 SPINT4Q6UDR6 99 aa4.26□□□□□ -1.73
LAMA3-212ENST00000591749 SPATA8Q6RVD6 105 aa4.25□□□□□ -1.73
LAMA3-212ENST00000591749 SERP1Q9Y6X1 66 aa4.24□□□□□ -1.73
LAMA3-212ENST00000591749 KRTAP12-1P59990 96 aa4.21□□□□□ -1.74
LAMA3-212ENST00000591749 LINC01558Q9Y6Z2 57 aa4.2□□□□□ -1.74
LAMA3-212ENST00000591749 SEC61GP60059 68 aa4.19□□□□□ -1.74
LAMA3-212ENST00000591749 KRTAP5-7Q6L8G8 165 aa4.18□□□□□ -1.74
LAMA3-212ENST00000591749 C10orf95Q9H7T3 257 aa4.18□□□□□ -1.74
LAMA3-212ENST00000591749 A0A1B0GU33 70 aa4.16□□□□□ -1.74
LAMA3-212ENST00000591749 LCE3AQ5TA76 89 aa4.16□□□□□ -1.74
LAMA3-212ENST00000591749 A0A1B0GU69 56 aa4.14□□□□□ -1.75
LAMA3-212ENST00000591749 RPS28P62857 69 aaKnown RBP4.12□□□□□ -1.75
LAMA3-212ENST00000591749 A8MU10 97 aa4.11□□□□□ -1.75
LAMA3-212ENST00000591749 Q1T7F1 81 aa4.09□□□□□ -1.75
LAMA3-212ENST00000591749 SMIM26A0A096LP01 95 aa4.08□□□□□ -1.76
LAMA3-212ENST00000591749 TNP1P09430 55 aa4.08□□□□□ -1.76
LAMA3-212ENST00000591749 KRTAP20-2Q3LI61 65 aa4.08□□□□□ -1.76
LAMA3-212ENST00000591749 PRR15LQ9BU68 103 aa4.08□□□□□ -1.76
LAMA3-212ENST00000591749 PSPHP1O15172 72 aa4.07□□□□□ -1.76
LAMA3-212ENST00000591749 H3BS24 57 aa4.02□□□□□ -1.77
LAMA3-212ENST00000591749 SPRR5A0A1B0GTR4 108 aa4.01□□□□□ -1.77
LAMA3-212ENST00000591749 KRTAP5-5Q701N2 237 aaPredicted RBP4.01□□□□□ -1.77
LAMA3-212ENST00000591749 KRTAP12-3P60328 96 aa3.99□□□□□ -1.77
LAMA3-212ENST00000591749 KRTAP12-4P60329 112 aa3.96□□□□□ -1.78
LAMA3-212ENST00000591749 V9GYY9 64 aa3.96□□□□□ -1.78
LAMA3-212ENST00000591749 UQCR11O14957 56 aa3.94□□□□□ -1.78
LAMA3-212ENST00000591749 MIR22HGQ0VDD5 57 aa3.92□□□□□ -1.78
LAMA3-212ENST00000591749 SYNE1Q8NF91 8797 aaKnown RBP3.9□□□□□ -1.78
LAMA3-212ENST00000591749 A6NED7 52 aa3.86□□□□□ -1.79
LAMA3-212ENST00000591749 CDC42SE1Q9NRR8 79 aa3.78□□□□□ -1.8
LAMA3-212ENST00000591749 KRTAP5-2Q701N4 177 aa3.72□□□□□ -1.81
LAMA3-212ENST00000591749 KRTAP25-1Q3LHN0 102 aa3.7□□□□□ -1.82
LAMA3-212ENST00000591749 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
LAMA3-212ENST00000591749 KRTAP6-1Q3LI64 71 aa3.66□□□□□ -1.82
LAMA3-212ENST00000591749 MT1AP04731 61 aa3.65□□□□□ -1.83
LAMA3-212ENST00000591749 LCE3CQ5T5A8 94 aa3.65□□□□□ -1.83
LAMA3-212ENST00000591749 BRK1Q8WUW1 75 aa3.65□□□□□ -1.83
LAMA3-212ENST00000591749 KRTAP15-1Q3LI76 137 aa3.64□□□□□ -1.83
LAMA3-212ENST00000591749 MUC5BQ9HC84 5762 aaPredicted RBP3.64□□□□□ -1.83
LAMA3-212ENST00000591749 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
LAMA3-212ENST00000591749 K7ERS5 55 aa3.62□□□□□ -1.83
LAMA3-212ENST00000591749 MUC5ACP98088 5654 aa3.61□□□□□ -1.83
LAMA3-212ENST00000591749 AHNAKQ09666 5890 aaKnown RBP3.6□□□□□ -1.83
LAMA3-212ENST00000591749 ROMO1P60602 79 aa3.59□□□□□ -1.83
LAMA3-212ENST00000591749 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
LAMA3-212ENST00000591749 KRTAP23-1A1A580 65 aa3.54□□□□□ -1.84
LAMA3-212ENST00000591749 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
LAMA3-212ENST00000591749 PMAIP1Q13794 54 aa3.42□□□□□ -1.86
LAMA3-212ENST00000591749 PRO0628Q9UI54 55 aa3.42□□□□□ -1.86
LAMA3-212ENST00000591749 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.87
LAMA3-212ENST00000591749 PRAC1Q96KF2 57 aa3.38□□□□□ -1.87
LAMA3-212ENST00000591749 MT3P25713 68 aa3.35□□□□□ -1.87
LAMA3-212ENST00000591749 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
LAMA3-212ENST00000591749 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
LAMA3-212ENST00000591749 KTN1-AS1Q86SY8 53 aa3.2□□□□□ -1.9
LAMA3-212ENST00000591749 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
LAMA3-212ENST00000591749 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
LAMA3-212ENST00000591749 SVIPQ8NHG7 77 aa2.98□□□□□ -1.93
LAMA3-212ENST00000591749 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
LAMA3-212ENST00000591749 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
LAMA3-212ENST00000591749 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
LAMA3-212ENST00000591749 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
LAMA3-212ENST00000591749 PHGR1C9JFL3 82 aa2.53□□□□□ -2
LAMA3-212ENST00000591749 LUZP6Q538Z0 58 aa2.53□□□□□ -2
LAMA3-212ENST00000591749 NDUFAF8A1L188 74 aa2.46□□□□□ -2.02
LAMA3-212ENST00000591749 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
LAMA3-212ENST00000591749 LCE3EQ5T5B0 92 aa2.37□□□□□ -2.03
LAMA3-212ENST00000591749 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
LAMA3-212ENST00000591749 A0A0A0MQY5 61 aa2.05□□□□□ -2.08
LAMA3-212ENST00000591749 INE1O15225 51 aa1.91□□□□□ -2.1
LAMA3-212ENST00000591749 PRM1P04553 51 aa1.91□□□□□ -2.1
LAMA3-212ENST00000591749 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
LAMA3-212ENST00000591749 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 44 ms