RNA–Protein interactions for RNA: ENST00000591714.5

HDAC5-210, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-210ENST00000591714 KRTAP4-9Q9BYQ8 210 aa6.17□□□□□ -1.42
HDAC5-210ENST00000591714 KRTAP12-1P59990 96 aa6.15□□□□□ -1.42
HDAC5-210ENST00000591714 PMAIP1Q13794 54 aa6.15□□□□□ -1.42
HDAC5-210ENST00000591714 SPINT4Q6UDR6 99 aa6.14□□□□□ -1.43
HDAC5-210ENST00000591714 KRTAP19-5Q3LI72 72 aa6.13□□□□□ -1.43
HDAC5-210ENST00000591714 GPR98Q8WXG9 6306 aa6.11□□□□□ -1.43
HDAC5-210ENST00000591714 MT1GP13640 62 aa6.04□□□□□ -1.44
HDAC5-210ENST00000591714 MT1MQ8N339 61 aa5.97□□□□□ -1.45
HDAC5-210ENST00000591714 LCE1DQ5T752 114 aa5.96□□□□□ -1.46
HDAC5-210ENST00000591714 MT1LQ93083 61 aa5.96□□□□□ -1.46
HDAC5-210ENST00000591714 ROMO1P60602 79 aa5.95□□□□□ -1.46
HDAC5-210ENST00000591714 PP632Q6XCG6 107 aa5.93□□□□□ -1.46
HDAC5-210ENST00000591714 KTN1-AS1Q86SY8 53 aa5.93□□□□□ -1.46
HDAC5-210ENST00000591714 KRTAP4-3Q9BYR4 195 aa5.93□□□□□ -1.46
HDAC5-210ENST00000591714 LCE3AQ5TA76 89 aa5.9□□□□□ -1.46
HDAC5-210ENST00000591714 C10orf95Q9H7T3 257 aa5.9□□□□□ -1.46
HDAC5-210ENST00000591714 MT4P47944 62 aa5.89□□□□□ -1.47
HDAC5-210ENST00000591714 LCE4AQ5TA78 99 aa5.86□□□□□ -1.47
HDAC5-210ENST00000591714 HMCN1Q96RW7 5635 aa5.85□□□□□ -1.47
HDAC5-210ENST00000591714 TNP1P09430 55 aa5.8□□□□□ -1.48
HDAC5-210ENST00000591714 SVIPQ8NHG7 77 aa5.78□□□□□ -1.48
HDAC5-210ENST00000591714 KRTAP5-4Q6L8H1 288 aa5.77□□□□□ -1.49
HDAC5-210ENST00000591714 KRTAP25-1Q3LHN0 102 aa5.76□□□□□ -1.49
HDAC5-210ENST00000591714 KRTAP4-6Q9BYQ5 205 aa5.75□□□□□ -1.49
HDAC5-210ENST00000591714 KRTAP4-7Q9BYR0 210 aa5.75□□□□□ -1.49
HDAC5-210ENST00000591714 AHNAK2Q8IVF2 5795 aa5.71□□□□□ -1.49
HDAC5-210ENST00000591714 PRAC1Q96KF2 57 aa5.68□□□□□ -1.5
HDAC5-210ENST00000591714 KRTAP12-3P60328 96 aa5.64□□□□□ -1.51
HDAC5-210ENST00000591714 KRTAP5-10Q6L8G5 202 aa5.61□□□□□ -1.51
HDAC5-210ENST00000591714 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
HDAC5-210ENST00000591714 KRTAP5-5Q701N2 237 aaPredicted RBP5.5□□□□□ -1.53
HDAC5-210ENST00000591714 KRTAP20-2Q3LI61 65 aa5.46□□□□□ -1.54
HDAC5-210ENST00000591714 LOC100996750A0A140TA64 210 aa5.45□□□□□ -1.54
HDAC5-210ENST00000591714 KRTAP5-3Q6L8H2 238 aa5.45□□□□□ -1.54
HDAC5-210ENST00000591714 KRTAP5-7Q6L8G8 165 aa5.38□□□□□ -1.55
HDAC5-210ENST00000591714 SPRR5A0A1B0GTR4 108 aa5.37□□□□□ -1.55
HDAC5-210ENST00000591714 SYNE1Q8NF91 8797 aaKnown RBP5.33□□□□□ -1.56
HDAC5-210ENST00000591714 KRTAP12-4P60329 112 aa5.32□□□□□ -1.56
HDAC5-210ENST00000591714 KRTAP15-1Q3LI76 137 aa5.22□□□□□ -1.57
HDAC5-210ENST00000591714 KRTAP19-4Q3LI73 84 aa5.19□□□□□ -1.58
HDAC5-210ENST00000591714 LCE3CQ5T5A8 94 aa5.19□□□□□ -1.58
HDAC5-210ENST00000591714 KRTAP6-1Q3LI64 71 aa5.07□□□□□ -1.6
HDAC5-210ENST00000591714 MT1AP04731 61 aa5.04□□□□□ -1.6
HDAC5-210ENST00000591714 KRTAP5-2Q701N4 177 aa5.03□□□□□ -1.6
HDAC5-210ENST00000591714 KRTAP4-11Q9BYQ6 195 aa5.02□□□□□ -1.61
HDAC5-210ENST00000591714 KRTAP9-6A8MVA2 160 aa4.99□□□□□ -1.61
HDAC5-210ENST00000591714 KRTAP9-4Q9BYQ2 154 aa4.91□□□□□ -1.62
HDAC5-210ENST00000591714 KRTAP5-8O75690 187 aa4.87□□□□□ -1.63
HDAC5-210ENST00000591714 KRTAP6-2Q3LI66 62 aa4.87□□□□□ -1.63
HDAC5-210ENST00000591714 LUZP6Q538Z0 58 aa4.79□□□□□ -1.64
HDAC5-210ENST00000591714 OBSCNQ5VST9 7968 aa4.79□□□□□ -1.64
HDAC5-210ENST00000591714 AHNAKQ09666 5890 aaKnown RBP4.72□□□□□ -1.65
HDAC5-210ENST00000591714 MUC5ACP98088 5654 aa4.69□□□□□ -1.66
HDAC5-210ENST00000591714 MUC5BQ9HC84 5762 aaPredicted RBP4.68□□□□□ -1.66
HDAC5-210ENST00000591714 MT3P25713 68 aa4.6□□□□□ -1.67
HDAC5-210ENST00000591714 KRTAP9-9Q9BYP9 154 aa4.59□□□□□ -1.67
HDAC5-210ENST00000591714 KRTAP5-1Q6L8H4 278 aa4.55□□□□□ -1.68
HDAC5-210ENST00000591714 NDUFAF8A1L188 74 aa4.54□□□□□ -1.68
HDAC5-210ENST00000591714 LCE1EQ5T753 118 aa4.25□□□□□ -1.73
HDAC5-210ENST00000591714 A0A0A0MQY5 61 aa4.1□□□□□ -1.75
HDAC5-210ENST00000591714 KRTAP4-2Q9BYR5 136 aa4.1□□□□□ -1.75
HDAC5-210ENST00000591714 LCE1BQ5T7P3 118 aa4.07□□□□□ -1.76
HDAC5-210ENST00000591714 LCE1CQ5T751 118 aa3.95□□□□□ -1.78
HDAC5-210ENST00000591714 H3BS24 57 aa3.94□□□□□ -1.78
HDAC5-210ENST00000591714 INE1O15225 51 aa3.87□□□□□ -1.79
HDAC5-210ENST00000591714 KRTAP4-12Q9BQ66 201 aa3.81□□□□□ -1.8
HDAC5-210ENST00000591714 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
HDAC5-210ENST00000591714 KRTAP5-11Q6L8G4 156 aa3.59□□□□□ -1.83
HDAC5-210ENST00000591714 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
HDAC5-210ENST00000591714 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.57□□□□□ -1.84
HDAC5-210ENST00000591714 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
HDAC5-210ENST00000591714 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
HDAC5-210ENST00000591714 PHGR1C9JFL3 82 aa3.26□□□□□ -1.89
HDAC5-210ENST00000591714 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
HDAC5-210ENST00000591714 PRM1P04553 51 aa3.07□□□□□ -1.92
HDAC5-210ENST00000591714 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
HDAC5-210ENST00000591714 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
HDAC5-210ENST00000591714 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 173.7 ms