RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-206ENST00000591515 LCE1DQ5T752 114 aa8.66□□□□□ -1.02
LSM7-206ENST00000591515 HMCN1Q96RW7 5635 aa8.65□□□□□ -1.03
LSM7-206ENST00000591515 KRTAP25-1Q3LHN0 102 aa8.63□□□□□ -1.03
LSM7-206ENST00000591515 LCE5AQ5TCM9 118 aa8.59□□□□□ -1.03
LSM7-206ENST00000591515 AHNAK2Q8IVF2 5795 aa8.59□□□□□ -1.03
LSM7-206ENST00000591515 KRTAP19-7Q3SYF9 63 aa8.57□□□□□ -1.04
LSM7-206ENST00000591515 LCE3AQ5TA76 89 aa8.56□□□□□ -1.04
LSM7-206ENST00000591515 MT1EP04732 61 aa8.51□□□□□ -1.05
LSM7-206ENST00000591515 KRTAP19-5Q3LI72 72 aa8.51□□□□□ -1.05
LSM7-206ENST00000591515 KRTAP5-10Q6L8G5 202 aa8.47□□□□□ -1.05
LSM7-206ENST00000591515 MT4P47944 62 aa8.45□□□□□ -1.06
LSM7-206ENST00000591515 KRTAP19-3Q7Z4W3 81 aa8.44□□□□□ -1.06
LSM7-206ENST00000591515 ROMO1P60602 79 aa8.42□□□□□ -1.06
LSM7-206ENST00000591515 LCE4AQ5TA78 99 aa8.39□□□□□ -1.07
LSM7-206ENST00000591515 KRTAP23-1A1A580 65 aa8.34□□□□□ -1.07
LSM7-206ENST00000591515 KRTAP12-3P60328 96 aa8.29□□□□□ -1.08
LSM7-206ENST00000591515 PP632Q6XCG6 107 aa8.28□□□□□ -1.08
LSM7-206ENST00000591515 MT1GP13640 62 aa8.27□□□□□ -1.09
LSM7-206ENST00000591515 BRK1Q8WUW1 75 aa8.25□□□□□ -1.09
LSM7-206ENST00000591515 KRTAP5-7Q6L8G8 165 aa8.23□□□□□ -1.09
LSM7-206ENST00000591515 MT1LQ93083 61 aa8.21□□□□□ -1.1
LSM7-206ENST00000591515 KRTAP4-6Q9BYQ5 205 aa8.14□□□□□ -1.11
LSM7-206ENST00000591515 KRTAP5-4Q6L8H1 288 aa8.13□□□□□ -1.11
LSM7-206ENST00000591515 MT1MQ8N339 61 aa8.08□□□□□ -1.12
LSM7-206ENST00000591515 KRTAP5-3Q6L8H2 238 aa8.07□□□□□ -1.12
LSM7-206ENST00000591515 KRTAP19-4Q3LI73 84 aa7.99□□□□□ -1.13
LSM7-206ENST00000591515 KRTAP15-1Q3LI76 137 aa7.92□□□□□ -1.14
LSM7-206ENST00000591515 SPRR5A0A1B0GTR4 108 aa7.91□□□□□ -1.14
LSM7-206ENST00000591515 KRTAP4-3Q9BYR4 195 aa7.9□□□□□ -1.14
LSM7-206ENST00000591515 PMAIP1Q13794 54 aa7.8□□□□□ -1.16
LSM7-206ENST00000591515 KRTAP4-7Q9BYR0 210 aa7.75□□□□□ -1.17
LSM7-206ENST00000591515 KRTAP20-2Q3LI61 65 aa7.72□□□□□ -1.17
LSM7-206ENST00000591515 LCE3CQ5T5A8 94 aa7.67□□□□□ -1.18
LSM7-206ENST00000591515 PRO0628Q9UI54 55 aa7.62□□□□□ -1.19
LSM7-206ENST00000591515 KRTAP5-5Q701N2 237 aaPredicted RBP7.45□□□□□ -1.22
LSM7-206ENST00000591515 KRTAP12-4P60329 112 aa7.39□□□□□ -1.23
LSM7-206ENST00000591515 SYNE1Q8NF91 8797 aaKnown RBP7.35□□□□□ -1.23
LSM7-206ENST00000591515 LOC100996750A0A140TA64 210 aa7.31□□□□□ -1.24
LSM7-206ENST00000591515 PRAC1Q96KF2 57 aa7.29□□□□□ -1.24
LSM7-206ENST00000591515 AHNAKQ09666 5890 aaKnown RBP7.27□□□□□ -1.25
LSM7-206ENST00000591515 KRTAP4-11Q9BYQ6 195 aa7.24□□□□□ -1.25
LSM7-206ENST00000591515 MUC5ACP98088 5654 aa7.23□□□□□ -1.25
LSM7-206ENST00000591515 KTN1-AS1Q86SY8 53 aa7.19□□□□□ -1.26
LSM7-206ENST00000591515 MUC5BQ9HC84 5762 aaPredicted RBP7.16□□□□□ -1.26
LSM7-206ENST00000591515 KRTAP9-6A8MVA2 160 aa7.09□□□□□ -1.27
LSM7-206ENST00000591515 KRTAP5-8O75690 187 aa7.05□□□□□ -1.28
LSM7-206ENST00000591515 MT1AP04731 61 aa7.03□□□□□ -1.28
LSM7-206ENST00000591515 KRTAP5-2Q701N4 177 aa6.98□□□□□ -1.29
LSM7-206ENST00000591515 KRTAP6-1Q3LI64 71 aa6.89□□□□□ -1.31
LSM7-206ENST00000591515 SVIPQ8NHG7 77 aa6.87□□□□□ -1.31
LSM7-206ENST00000591515 OBSCNQ5VST9 7968 aa6.83□□□□□ -1.32
LSM7-206ENST00000591515 KRTAP9-9Q9BYP9 154 aa6.77□□□□□ -1.33
LSM7-206ENST00000591515 KRTAP9-4Q9BYQ2 154 aa6.74□□□□□ -1.33
LSM7-206ENST00000591515 KRTAP6-2Q3LI66 62 aa6.54□□□□□ -1.36
LSM7-206ENST00000591515 MT3P25713 68 aa6.46□□□□□ -1.38
LSM7-206ENST00000591515 KRTAP5-1Q6L8H4 278 aa6.42□□□□□ -1.38
LSM7-206ENST00000591515 LUZP6Q538Z0 58 aa6.29□□□□□ -1.4
LSM7-206ENST00000591515 LCE1EQ5T753 118 aa5.8□□□□□ -1.48
LSM7-206ENST00000591515 LCE3DQ9BYE3 92 aa5.65□□□□□ -1.5
LSM7-206ENST00000591515 KRTAP4-2Q9BYR5 136 aa5.62□□□□□ -1.51
LSM7-206ENST00000591515 LCE1BQ5T7P3 118 aa5.55□□□□□ -1.52
LSM7-206ENST00000591515 KRTAP4-12Q9BQ66 201 aa5.45□□□□□ -1.54
LSM7-206ENST00000591515 LCE3EQ5T5B0 92 aa5.41□□□□□ -1.54
LSM7-206ENST00000591515 NDUFAF8A1L188 74 aa5.38□□□□□ -1.55
LSM7-206ENST00000591515 LCE1CQ5T751 118 aa5.38□□□□□ -1.55
LSM7-206ENST00000591515 KRTAP5-11Q6L8G4 156 aa5.11□□□□□ -1.59
LSM7-206ENST00000591515 LCE1FQ5T754 118 aa4.99□□□□□ -1.61
LSM7-206ENST00000591515 PHGR1C9JFL3 82 aa4.95□□□□□ -1.62
LSM7-206ENST00000591515 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.93□□□□□ -1.62
LSM7-206ENST00000591515 A0A0A0MQY5 61 aa4.64□□□□□ -1.67
LSM7-206ENST00000591515 KRTAP21-2Q3LI59 83 aa4.52□□□□□ -1.69
LSM7-206ENST00000591515 INE1O15225 51 aa4.51□□□□□ -1.69
LSM7-206ENST00000591515 PRM1P04553 51 aa4.29□□□□□ -1.72
LSM7-206ENST00000591515 MUC19Q7Z5P9 8384 aa4.28□□□□□ -1.72
LSM7-206ENST00000591515 KRTAP4-4Q9BYR3 166 aa4.19□□□□□ -1.74
LSM7-206ENST00000591515 KRTAP21-1Q3LI58 79 aa3.75□□□□□ -1.81
LSM7-206ENST00000591515 H3BS24 57 aa3.63□□□□□ -1.83
LSM7-206ENST00000591515 MUC16Q8WXI7 14507 aa2.96□□□□□ -1.94
Retrieved 78 of 20,778 RNA–protein pairs in 118.3 ms