RNA–Protein interactions for RNA: ENST00000591338.1

LINC00662-208, long intergenic non-protein coding RNA 662, humanhuman

TSL 2

Gene LINC00662, Length 436 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-208ENST00000591338 PRO2289Q9P1D8 64 aa4.91□□□□□ -1.62
LINC00662-208ENST00000591338 MACF1Q9UPN3 7388 aaKnown RBP4.88□□□□□ -1.63
LINC00662-208ENST00000591338 C10orf95Q9H7T3 257 aa4.88□□□□□ -1.63
LINC00662-208ENST00000591338 PRO0628Q9UI54 55 aa4.86□□□□□ -1.63
LINC00662-208ENST00000591338 ROMO1P60602 79 aa4.8□□□□□ -1.64
LINC00662-208ENST00000591338 PMAIP1Q13794 54 aa4.8□□□□□ -1.64
LINC00662-208ENST00000591338 TNP1P09430 55 aa4.75□□□□□ -1.65
LINC00662-208ENST00000591338 KRTAP6-3Q3LI67 103 aa4.75□□□□□ -1.65
LINC00662-208ENST00000591338 PRAC1Q96KF2 57 aa4.73□□□□□ -1.65
LINC00662-208ENST00000591338 KRTAP10-12P60413 245 aa4.71□□□□□ -1.66
LINC00662-208ENST00000591338 KRTAP25-1Q3LHN0 102 aa4.71□□□□□ -1.66
LINC00662-208ENST00000591338 NEBP20929 6669 aa4.65□□□□□ -1.66
LINC00662-208ENST00000591338 MUC12Q9UKN1 5478 aa4.59□□□□□ -1.68
LINC00662-208ENST00000591338 LCE3AQ5TA76 89 aa4.57□□□□□ -1.68
LINC00662-208ENST00000591338 KMT2DO14686 5537 aa4.55□□□□□ -1.68
LINC00662-208ENST00000591338 KRTAP20-1Q3LI63 56 aa4.52□□□□□ -1.69
LINC00662-208ENST00000591338 KRTAP8-1Q8IUC2 63 aa4.52□□□□□ -1.69
LINC00662-208ENST00000591338 KTN1-AS1Q86SY8 53 aa4.51□□□□□ -1.69
LINC00662-208ENST00000591338 PP632Q6XCG6 107 aa4.5□□□□□ -1.69
LINC00662-208ENST00000591338 NDUFAF8A1L188 74 aa4.48□□□□□ -1.69
LINC00662-208ENST00000591338 KRTAP19-5Q3LI72 72 aa4.45□□□□□ -1.7
LINC00662-208ENST00000591338 KRTAP5-9P26371 169 aa4.43□□□□□ -1.7
LINC00662-208ENST00000591338 KRTAP19-7Q3SYF9 63 aa4.43□□□□□ -1.7
LINC00662-208ENST00000591338 LCE1FQ5T754 118 aa4.42□□□□□ -1.7
LINC00662-208ENST00000591338 MDN1Q9NU22 5596 aa4.41□□□□□ -1.7
LINC00662-208ENST00000591338 KRTAP12-3P60328 96 aa4.4□□□□□ -1.71
LINC00662-208ENST00000591338 SPRR2FQ96RM1 72 aa4.39□□□□□ -1.71
LINC00662-208ENST00000591338 KRTAP9-6A8MVA2 160 aa4.35□□□□□ -1.71
LINC00662-208ENST00000591338 MT1EP04732 61 aa4.35□□□□□ -1.71
LINC00662-208ENST00000591338 KRTAP2-3P0C7H8 128 aa4.33□□□□□ -1.72
LINC00662-208ENST00000591338 KRTAP2-4Q9BYR9 128 aa4.33□□□□□ -1.72
LINC00662-208ENST00000591338 KRTAP5-1Q6L8H4 278 aa4.31□□□□□ -1.72
LINC00662-208ENST00000591338 SPRR2EP22531 72 aa4.25□□□□□ -1.73
LINC00662-208ENST00000591338 SPRR2BP35325 72 aa4.25□□□□□ -1.73
LINC00662-208ENST00000591338 SPRR2AP35326 72 aa4.25□□□□□ -1.73
LINC00662-208ENST00000591338 MT1LQ93083 61 aa4.24□□□□□ -1.73
LINC00662-208ENST00000591338 KRTAP19-3Q7Z4W3 81 aa4.22□□□□□ -1.73
LINC00662-208ENST00000591338 MT1GP13640 62 aa4.19□□□□□ -1.74
LINC00662-208ENST00000591338 LCE3CQ5T5A8 94 aa4.18□□□□□ -1.74
LINC00662-208ENST00000591338 KRTAP2-1Q9BYU5 128 aa4.18□□□□□ -1.74
LINC00662-208ENST00000591338 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
LINC00662-208ENST00000591338 MT1MQ8N339 61 aa4.12□□□□□ -1.75
LINC00662-208ENST00000591338 SPRR2DP22532 72 aa4.1□□□□□ -1.75
LINC00662-208ENST00000591338 KRTAP4-4Q9BYR3 166 aa4.1□□□□□ -1.75
LINC00662-208ENST00000591338 KRTAP4-3Q9BYR4 195 aa4.03□□□□□ -1.76
LINC00662-208ENST00000591338 SPRR5A0A1B0GTR4 108 aa3.92□□□□□ -1.78
LINC00662-208ENST00000591338 GPR98Q8WXG9 6306 aa3.92□□□□□ -1.78
LINC00662-208ENST00000591338 DSTQ03001 7570 aaKnown RBP3.89□□□□□ -1.79
LINC00662-208ENST00000591338 LCE3EQ5T5B0 92 aa3.8□□□□□ -1.8
LINC00662-208ENST00000591338 OBSCNQ5VST9 7968 aa3.76□□□□□ -1.81
LINC00662-208ENST00000591338 KRTAP5-5Q701N2 237 aaPredicted RBP3.72□□□□□ -1.81
LINC00662-208ENST00000591338 LUZP6Q538Z0 58 aa3.68□□□□□ -1.82
LINC00662-208ENST00000591338 HMCN1Q96RW7 5635 aa3.63□□□□□ -1.83
LINC00662-208ENST00000591338 MT1AP04731 61 aa3.62□□□□□ -1.83
LINC00662-208ENST00000591338 MT4P47944 62 aa3.62□□□□□ -1.83
LINC00662-208ENST00000591338 AHNAK2Q8IVF2 5795 aa3.58□□□□□ -1.84
LINC00662-208ENST00000591338 KRTAP6-1Q3LI64 71 aa3.58□□□□□ -1.84
LINC00662-208ENST00000591338 KRTAP5-10Q6L8G5 202 aa3.55□□□□□ -1.84
LINC00662-208ENST00000591338 SYNE1Q8NF91 8797 aaKnown RBP3.53□□□□□ -1.84
LINC00662-208ENST00000591338 KRTAP12-4P60329 112 aa3.5□□□□□ -1.85
LINC00662-208ENST00000591338 KRTAP5-7Q6L8G8 165 aa3.44□□□□□ -1.86
LINC00662-208ENST00000591338 KRTAP20-2Q3LI61 65 aa3.41□□□□□ -1.86
LINC00662-208ENST00000591338 KRTAP5-2Q701N4 177 aa3.38□□□□□ -1.87
LINC00662-208ENST00000591338 KRTAP6-2Q3LI66 62 aa3.33□□□□□ -1.88
LINC00662-208ENST00000591338 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
LINC00662-208ENST00000591338 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
LINC00662-208ENST00000591338 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
LINC00662-208ENST00000591338 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
LINC00662-208ENST00000591338 MUC5ACP98088 5654 aa2.99□□□□□ -1.93
LINC00662-208ENST00000591338 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
LINC00662-208ENST00000591338 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
LINC00662-208ENST00000591338 INE1O15225 51 aa2.87□□□□□ -1.95
LINC00662-208ENST00000591338 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
LINC00662-208ENST00000591338 PRM1P04553 51 aa2.49□□□□□ -2.01
LINC00662-208ENST00000591338 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
LINC00662-208ENST00000591338 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
LINC00662-208ENST00000591338 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
LINC00662-208ENST00000591338 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 145.1 ms