RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 A0A0D9SG42 100 aa6.03□□□□□ -1.44
DDX39A-216ENST00000591275 LCE1DQ5T752 114 aa6.03□□□□□ -1.44
DDX39A-216ENST00000591275 KRTAP12-1P59990 96 aa6.01□□□□□ -1.45
DDX39A-216ENST00000591275 KRTAP19-3Q7Z4W3 81 aa5.99□□□□□ -1.45
DDX39A-216ENST00000591275 KRTAP19-7Q3SYF9 63 aa5.97□□□□□ -1.45
DDX39A-216ENST00000591275 MT1EP04732 61 aa5.95□□□□□ -1.46
DDX39A-216ENST00000591275 MT4P47944 62 aa5.93□□□□□ -1.46
DDX39A-216ENST00000591275 SPINT4Q6UDR6 99 aa5.93□□□□□ -1.46
DDX39A-216ENST00000591275 HMCN1Q96RW7 5635 aa5.93□□□□□ -1.46
DDX39A-216ENST00000591275 ROMO1P60602 79 aa5.92□□□□□ -1.46
DDX39A-216ENST00000591275 LCE4AQ5TA78 99 aa5.86□□□□□ -1.47
DDX39A-216ENST00000591275 AHNAK2Q8IVF2 5795 aa5.85□□□□□ -1.47
DDX39A-216ENST00000591275 CAMK2N1Q7Z7J9 78 aa5.82□□□□□ -1.48
DDX39A-216ENST00000591275 KRTAP5-10Q6L8G5 202 aa5.81□□□□□ -1.48
DDX39A-216ENST00000591275 MT1GP13640 62 aa5.78□□□□□ -1.48
DDX39A-216ENST00000591275 KRTAP19-5Q3LI72 72 aa5.73□□□□□ -1.49
DDX39A-216ENST00000591275 PP632Q6XCG6 107 aa5.73□□□□□ -1.49
DDX39A-216ENST00000591275 PRAC1Q96KF2 57 aa5.73□□□□□ -1.49
DDX39A-216ENST00000591275 KRTAP25-1Q3LHN0 102 aa5.72□□□□□ -1.49
DDX39A-216ENST00000591275 MT1MQ8N339 61 aa5.7□□□□□ -1.5
DDX39A-216ENST00000591275 KRTAP4-6Q9BYQ5 205 aa5.7□□□□□ -1.5
DDX39A-216ENST00000591275 KRTAP5-4Q6L8H1 288 aa5.67□□□□□ -1.5
DDX39A-216ENST00000591275 C10orf95Q9H7T3 257 aa5.67□□□□□ -1.5
DDX39A-216ENST00000591275 KRTAP5-7Q6L8G8 165 aa5.63□□□□□ -1.51
DDX39A-216ENST00000591275 KRTAP4-3Q9BYR4 195 aa5.63□□□□□ -1.51
DDX39A-216ENST00000591275 MT1LQ93083 61 aa5.61□□□□□ -1.51
DDX39A-216ENST00000591275 KRTAP5-3Q6L8H2 238 aa5.58□□□□□ -1.52
DDX39A-216ENST00000591275 KRTAP23-1A1A580 65 aa5.57□□□□□ -1.52
DDX39A-216ENST00000591275 TNP1P09430 55 aa5.54□□□□□ -1.52
DDX39A-216ENST00000591275 SPRR5A0A1B0GTR4 108 aa5.46□□□□□ -1.54
DDX39A-216ENST00000591275 KRTAP20-2Q3LI61 65 aa5.41□□□□□ -1.54
DDX39A-216ENST00000591275 LCE3AQ5TA76 89 aa5.38□□□□□ -1.55
DDX39A-216ENST00000591275 KRTAP4-7Q9BYR0 210 aa5.37□□□□□ -1.55
DDX39A-216ENST00000591275 KRTAP5-5Q701N2 237 aaPredicted RBP5.25□□□□□ -1.57
DDX39A-216ENST00000591275 KRTAP12-4P60329 112 aa5.23□□□□□ -1.57
DDX39A-216ENST00000591275 KRTAP12-3P60328 96 aa5.15□□□□□ -1.59
DDX39A-216ENST00000591275 SYNE1Q8NF91 8797 aaKnown RBP5.14□□□□□ -1.59
DDX39A-216ENST00000591275 LOC100996750A0A140TA64 210 aa5.11□□□□□ -1.59
DDX39A-216ENST00000591275 KRTAP15-1Q3LI76 137 aa5.09□□□□□ -1.59
DDX39A-216ENST00000591275 KRTAP4-11Q9BYQ6 195 aa5.05□□□□□ -1.6
DDX39A-216ENST00000591275 KRTAP19-4Q3LI73 84 aa4.99□□□□□ -1.61
DDX39A-216ENST00000591275 AHNAKQ09666 5890 aaKnown RBP4.94□□□□□ -1.62
DDX39A-216ENST00000591275 MUC5ACP98088 5654 aa4.93□□□□□ -1.62
DDX39A-216ENST00000591275 KRTAP5-8O75690 187 aa4.9□□□□□ -1.63
DDX39A-216ENST00000591275 KRTAP5-2Q701N4 177 aa4.89□□□□□ -1.63
DDX39A-216ENST00000591275 MUC5BQ9HC84 5762 aaPredicted RBP4.87□□□□□ -1.63
DDX39A-216ENST00000591275 LUZP6Q538Z0 58 aa4.8□□□□□ -1.64
DDX39A-216ENST00000591275 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
DDX39A-216ENST00000591275 OBSCNQ5VST9 7968 aa4.76□□□□□ -1.65
DDX39A-216ENST00000591275 MT1AP04731 61 aa4.75□□□□□ -1.65
DDX39A-216ENST00000591275 LCE3CQ5T5A8 94 aa4.72□□□□□ -1.65
DDX39A-216ENST00000591275 KRTAP9-9Q9BYP9 154 aa4.71□□□□□ -1.66
DDX39A-216ENST00000591275 NDUFAF8A1L188 74 aa4.67□□□□□ -1.66
DDX39A-216ENST00000591275 KRTAP6-2Q3LI66 62 aa4.66□□□□□ -1.66
DDX39A-216ENST00000591275 KRTAP9-4Q9BYQ2 154 aa4.64□□□□□ -1.67
DDX39A-216ENST00000591275 KRTAP5-1Q6L8H4 278 aa4.48□□□□□ -1.69
DDX39A-216ENST00000591275 KRTAP9-6A8MVA2 160 aa4.47□□□□□ -1.69
DDX39A-216ENST00000591275 MT3P25713 68 aa4.36□□□□□ -1.71
DDX39A-216ENST00000591275 H3BS24 57 aa4.27□□□□□ -1.73
DDX39A-216ENST00000591275 A0A0A0MQY5 61 aa4.26□□□□□ -1.73
DDX39A-216ENST00000591275 LCE1EQ5T753 118 aa4.09□□□□□ -1.75
DDX39A-216ENST00000591275 INE1O15225 51 aa4.03□□□□□ -1.76
DDX39A-216ENST00000591275 LCE1BQ5T7P3 118 aa3.96□□□□□ -1.78
DDX39A-216ENST00000591275 KRTAP4-2Q9BYR5 136 aa3.95□□□□□ -1.78
DDX39A-216ENST00000591275 LCE1CQ5T751 118 aa3.81□□□□□ -1.8
DDX39A-216ENST00000591275 KRTAP4-12Q9BQ66 201 aa3.8□□□□□ -1.8
DDX39A-216ENST00000591275 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
DDX39A-216ENST00000591275 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
DDX39A-216ENST00000591275 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
DDX39A-216ENST00000591275 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
DDX39A-216ENST00000591275 PHGR1C9JFL3 82 aa3.42□□□□□ -1.86
DDX39A-216ENST00000591275 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.87
DDX39A-216ENST00000591275 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
DDX39A-216ENST00000591275 PRM1P04553 51 aa3.02□□□□□ -1.93
DDX39A-216ENST00000591275 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
DDX39A-216ENST00000591275 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
DDX39A-216ENST00000591275 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
DDX39A-216ENST00000591275 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 9.7 ms