RNA–Protein interactions for RNA: ENST00000591115.5

PTPN2-210, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,648 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-210ENST00000591115 LCE3AQ5TA76 89 aa3.94□□□□□ -1.78
PTPN2-210ENST00000591115 MACF1Q9UPN3 7388 aaKnown RBP3.93□□□□□ -1.78
PTPN2-210ENST00000591115 KRTAP10-12P60413 245 aa3.92□□□□□ -1.78
PTPN2-210ENST00000591115 KRTAP15-1Q3LI76 137 aa3.92□□□□□ -1.78
PTPN2-210ENST00000591115 KRTAP5-11Q6L8G4 156 aa3.91□□□□□ -1.78
PTPN2-210ENST00000591115 KRTAP8-1Q8IUC2 63 aa3.91□□□□□ -1.78
PTPN2-210ENST00000591115 KRTAP10-7P60409 375 aaPredicted RBP3.9□□□□□ -1.79
PTPN2-210ENST00000591115 SYNE2Q8WXH0 6885 aaKnown RBP3.84□□□□□ -1.8
PTPN2-210ENST00000591115 KMT2DO14686 5537 aa3.83□□□□□ -1.8
PTPN2-210ENST00000591115 KRTAP12-3P60328 96 aa3.8□□□□□ -1.8
PTPN2-210ENST00000591115 SPRR5A0A1B0GTR4 108 aa3.74□□□□□ -1.81
PTPN2-210ENST00000591115 A0A0A0MQY5 61 aa3.71□□□□□ -1.82
PTPN2-210ENST00000591115 KRTAP19-5Q3LI72 72 aa3.7□□□□□ -1.82
PTPN2-210ENST00000591115 LUZP6Q538Z0 58 aa3.69□□□□□ -1.82
PTPN2-210ENST00000591115 NDUFAF8A1L188 74 aa3.66□□□□□ -1.82
PTPN2-210ENST00000591115 KRTAP6-3Q3LI67 103 aa3.64□□□□□ -1.83
PTPN2-210ENST00000591115 KRTAP19-7Q3SYF9 63 aa3.63□□□□□ -1.83
PTPN2-210ENST00000591115 LCE1AQ5T7P2 110 aa3.63□□□□□ -1.83
PTPN2-210ENST00000591115 KRTAP5-9P26371 169 aa3.62□□□□□ -1.83
PTPN2-210ENST00000591115 SPRR2FQ96RM1 72 aa3.62□□□□□ -1.83
PTPN2-210ENST00000591115 MUC12Q9UKN1 5478 aa3.61□□□□□ -1.83
PTPN2-210ENST00000591115 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
PTPN2-210ENST00000591115 MT1EP04732 61 aa3.57□□□□□ -1.84
PTPN2-210ENST00000591115 LCE3CQ5T5A8 94 aa3.56□□□□□ -1.84
PTPN2-210ENST00000591115 MDN1Q9NU22 5596 aa3.55□□□□□ -1.84
PTPN2-210ENST00000591115 NEBP20929 6669 aa3.54□□□□□ -1.84
PTPN2-210ENST00000591115 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
PTPN2-210ENST00000591115 MT1LQ93083 61 aa3.52□□□□□ -1.85
PTPN2-210ENST00000591115 SPRR2EP22531 72 aa3.49□□□□□ -1.85
PTPN2-210ENST00000591115 SPRR2BP35325 72 aa3.49□□□□□ -1.85
PTPN2-210ENST00000591115 SPRR2AP35326 72 aa3.49□□□□□ -1.85
PTPN2-210ENST00000591115 KRTAP5-4Q6L8H1 288 aa3.48□□□□□ -1.85
PTPN2-210ENST00000591115 KRTAP2-2Q9BYT5 123 aa3.46□□□□□ -1.86
PTPN2-210ENST00000591115 KRTAP19-3Q7Z4W3 81 aa3.43□□□□□ -1.86
PTPN2-210ENST00000591115 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
PTPN2-210ENST00000591115 MT1GP13640 62 aa3.41□□□□□ -1.86
PTPN2-210ENST00000591115 SPRR2DP22532 72 aa3.37□□□□□ -1.87
PTPN2-210ENST00000591115 MT1MQ8N339 61 aa3.35□□□□□ -1.87
PTPN2-210ENST00000591115 KRTAP9-6A8MVA2 160 aa3.34□□□□□ -1.87
PTPN2-210ENST00000591115 DSTQ03001 7570 aaKnown RBP3.31□□□□□ -1.88
PTPN2-210ENST00000591115 KRTAP4-3Q9BYR4 195 aa3.3□□□□□ -1.88
PTPN2-210ENST00000591115 KRTAP20-1Q3LI63 56 aa3.25□□□□□ -1.89
PTPN2-210ENST00000591115 KRTAP2-3P0C7H8 128 aa3.21□□□□□ -1.9
PTPN2-210ENST00000591115 KRTAP2-4Q9BYR9 128 aa3.21□□□□□ -1.9
PTPN2-210ENST00000591115 KRTAP2-1Q9BYU5 128 aa3.19□□□□□ -1.9
PTPN2-210ENST00000591115 INE1O15225 51 aa3.08□□□□□ -1.92
PTPN2-210ENST00000591115 OBSCNQ5VST9 7968 aa3.07□□□□□ -1.92
PTPN2-210ENST00000591115 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
PTPN2-210ENST00000591115 MT1AP04731 61 aa3.01□□□□□ -1.93
PTPN2-210ENST00000591115 GPR98Q8WXG9 6306 aa2.99□□□□□ -1.93
PTPN2-210ENST00000591115 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
PTPN2-210ENST00000591115 MT4P47944 62 aa2.94□□□□□ -1.94
PTPN2-210ENST00000591115 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
PTPN2-210ENST00000591115 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
PTPN2-210ENST00000591115 MT3P25713 68 aa2.91□□□□□ -1.94
PTPN2-210ENST00000591115 SYNE1Q8NF91 8797 aaKnown RBP2.89□□□□□ -1.95
PTPN2-210ENST00000591115 KRTAP12-4P60329 112 aa2.83□□□□□ -1.96
PTPN2-210ENST00000591115 KRTAP20-2Q3LI61 65 aa2.81□□□□□ -1.96
PTPN2-210ENST00000591115 KRTAP6-2Q3LI66 62 aa2.71□□□□□ -1.97
PTPN2-210ENST00000591115 LCE3DQ9BYE3 92 aa2.7□□□□□ -1.98
PTPN2-210ENST00000591115 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
PTPN2-210ENST00000591115 LCE1FQ5T754 118 aa2.65□□□□□ -1.98
PTPN2-210ENST00000591115 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
PTPN2-210ENST00000591115 KRTAP5-10Q6L8G5 202 aa2.53□□□□□ -2
PTPN2-210ENST00000591115 KRTAP5-8O75690 187 aa2.52□□□□□ -2.01
PTPN2-210ENST00000591115 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
PTPN2-210ENST00000591115 PRM1P04553 51 aa2.35□□□□□ -2.03
PTPN2-210ENST00000591115 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
PTPN2-210ENST00000591115 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
PTPN2-210ENST00000591115 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
PTPN2-210ENST00000591115 MUC5ACP98088 5654 aa2.29□□□□□ -2.04
PTPN2-210ENST00000591115 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
PTPN2-210ENST00000591115 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
PTPN2-210ENST00000591115 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
PTPN2-210ENST00000591115 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
PTPN2-210ENST00000591115 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
PTPN2-210ENST00000591115 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms