RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, human

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC1-212	ENST00000591107	KRTAP5-11	Q6L8G4	156 aa		5.58	□□□□□ -1.52
NPC1-212	ENST00000591107	LINC01554	Q52M75	96 aa		5.56	□□□□□ -1.52
NPC1-212	ENST00000591107		A6NED7	52 aa		5.54	□□□□□ -1.52
NPC1-212	ENST00000591107	KRTAP8-1	Q8IUC2	63 aa		5.53	□□□□□ -1.52
NPC1-212	ENST00000591107		A0A0D9SG42	100 aa		5.52	□□□□□ -1.53
NPC1-212	ENST00000591107	MIR22HG	Q0VDD5	57 aa		5.52	□□□□□ -1.53
NPC1-212	ENST00000591107		A8MU10	97 aa		5.51	□□□□□ -1.53
NPC1-212	ENST00000591107	PRO2289	Q9P1D8	64 aa		5.48	□□□□□ -1.53
NPC1-212	ENST00000591107	SPRR2D	P22532	72 aa		5.45	□□□□□ -1.54
NPC1-212	ENST00000591107	KRTAP10-7	P60409	375 aa	Predicted RBP	5.45	□□□□□ -1.54
NPC1-212	ENST00000591107	PLAC4	Q8WY50	150 aa		5.43	□□□□□ -1.54
NPC1-212	ENST00000591107	KRTAP2-1	Q9BYU5	128 aa		5.43	□□□□□ -1.54
NPC1-212	ENST00000591107	KRTAP12-1	P59990	96 aa		5.41	□□□□□ -1.54
NPC1-212	ENST00000591107	CDC42SE1	Q9NRR8	79 aa		5.41	□□□□□ -1.54
NPC1-212	ENST00000591107	KRTAP12-2	P59991	146 aa		5.4	□□□□□ -1.54
NPC1-212	ENST00000591107	SPINT4	Q6UDR6	99 aa		5.4	□□□□□ -1.54
NPC1-212	ENST00000591107	BRK1	Q8WUW1	75 aa		5.35	□□□□□ -1.55
NPC1-212	ENST00000591107		K7ERS5	55 aa		5.3	□□□□□ -1.56
NPC1-212	ENST00000591107	CAMK2N1	Q7Z7J9	78 aa		5.3	□□□□□ -1.56
NPC1-212	ENST00000591107	LCE1F	Q5T754	118 aa		5.29	□□□□□ -1.56
NPC1-212	ENST00000591107	KRTAP10-12	P60413	245 aa		5.24	□□□□□ -1.57
NPC1-212	ENST00000591107	GPR98	Q8WXG9	6306 aa		5.22	□□□□□ -1.57
NPC1-212	ENST00000591107	C10orf95	Q9H7T3	257 aa		5.12	□□□□□ -1.59
NPC1-212	ENST00000591107	PRO0628	Q9UI54	55 aa		5.1	□□□□□ -1.59
NPC1-212	ENST00000591107	DST	Q03001	7570 aa	Known RBP	5.09	□□□□□ -1.59
NPC1-212	ENST00000591107	ROMO1	P60602	79 aa		5.05	□□□□□ -1.6
NPC1-212	ENST00000591107	PMAIP1	Q13794	54 aa		5.03	□□□□□ -1.6
NPC1-212	ENST00000591107	KRTAP5-1	Q6L8H4	278 aa		5.02	□□□□□ -1.61
NPC1-212	ENST00000591107	TNP1	P09430	55 aa		5	□□□□□ -1.61
NPC1-212	ENST00000591107	KRTAP19-7	Q3SYF9	63 aa		4.99	□□□□□ -1.61
NPC1-212	ENST00000591107	MT1E	P04732	61 aa		4.96	□□□□□ -1.62
NPC1-212	ENST00000591107	LCE1E	Q5T753	118 aa		4.96	□□□□□ -1.62
NPC1-212	ENST00000591107	KRTAP25-1	Q3LHN0	102 aa		4.95	□□□□□ -1.62
NPC1-212	ENST00000591107	KRTAP19-3	Q7Z4W3	81 aa		4.94	□□□□□ -1.62
NPC1-212	ENST00000591107	LCE3C	Q5T5A8	94 aa		4.93	□□□□□ -1.62
NPC1-212	ENST00000591107	KRTAP5-4	Q6L8H1	288 aa		4.9	□□□□□ -1.63
NPC1-212	ENST00000591107	KRTAP4-4	Q9BYR3	166 aa		4.88	□□□□□ -1.63
NPC1-212	ENST00000591107	HMCN1	Q96RW7	5635 aa		4.87	□□□□□ -1.63
NPC1-212	ENST00000591107	LCE3A	Q5TA76	89 aa		4.84	□□□□□ -1.63
NPC1-212	ENST00000591107	AHNAK2	Q8IVF2	5795 aa		4.83	□□□□□ -1.64
NPC1-212	ENST00000591107	MT4	P47944	62 aa		4.83	□□□□□ -1.64
NPC1-212	ENST00000591107	KRTAP19-5	Q3LI72	72 aa		4.81	□□□□□ -1.64
NPC1-212	ENST00000591107	KTN1-AS1	Q86SY8	53 aa		4.77	□□□□□ -1.65
NPC1-212	ENST00000591107	MT1G	P13640	62 aa		4.74	□□□□□ -1.65
NPC1-212	ENST00000591107	MT1M	Q8N339	61 aa		4.74	□□□□□ -1.65
NPC1-212	ENST00000591107	PP632	Q6XCG6	107 aa		4.73	□□□□□ -1.65
NPC1-212	ENST00000591107	KRTAP4-3	Q9BYR4	195 aa		4.73	□□□□□ -1.65
NPC1-212	ENST00000591107	MT1L	Q93083	61 aa		4.69	□□□□□ -1.66
NPC1-212	ENST00000591107	KRTAP5-10	Q6L8G5	202 aa		4.64	□□□□□ -1.67
NPC1-212	ENST00000591107	KRTAP12-3	P60328	96 aa		4.63	□□□□□ -1.67
NPC1-212	ENST00000591107	KRTAP9-6	A8MVA2	160 aa		4.5	□□□□□ -1.69
NPC1-212	ENST00000591107	LCE3E	Q5T5B0	92 aa		4.5	□□□□□ -1.69
NPC1-212	ENST00000591107	KRTAP5-7	Q6L8G8	165 aa		4.45	□□□□□ -1.7
NPC1-212	ENST00000591107	KRTAP20-2	Q3LI61	65 aa		4.41	□□□□□ -1.7
NPC1-212	ENST00000591107	SYNE1	Q8NF91	8797 aa	Known RBP	4.37	□□□□□ -1.71
NPC1-212	ENST00000591107	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.35	□□□□□ -1.71
NPC1-212	ENST00000591107	SPRR5	A0A1B0GTR4	108 aa		4.32	□□□□□ -1.72
NPC1-212	ENST00000591107	OBSCN	Q5VST9	7968 aa		4.31	□□□□□ -1.72
NPC1-212	ENST00000591107	KRTAP12-4	P60329	112 aa		4.23	□□□□□ -1.73
NPC1-212	ENST00000591107	KRTAP5-2	Q701N4	177 aa		4.2	□□□□□ -1.74
NPC1-212	ENST00000591107	AHNAK	Q09666	5890 aa	Known RBP	4.04	□□□□□ -1.76
NPC1-212	ENST00000591107	KRTAP6-1	Q3LI64	71 aa		4.02	□□□□□ -1.77
NPC1-212	ENST00000591107	LUZP6	Q538Z0	58 aa		3.99	□□□□□ -1.77
NPC1-212	ENST00000591107	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.98	□□□□□ -1.77
NPC1-212	ENST00000591107	MT1A	P04731	61 aa		3.97	□□□□□ -1.77
NPC1-212	ENST00000591107	MUC5AC	P98088	5654 aa		3.97	□□□□□ -1.77
NPC1-212	ENST00000591107	KRTAP5-8	O75690	187 aa		3.96	□□□□□ -1.78
NPC1-212	ENST00000591107	KRTAP6-2	Q3LI66	62 aa		3.87	□□□□□ -1.79
NPC1-212	ENST00000591107	LCE3D	Q9BYE3	92 aa		3.79	□□□□□ -1.8
NPC1-212	ENST00000591107	LCE1C	Q5T751	118 aa		3.31	□□□□□ -1.88
NPC1-212	ENST00000591107	LCE1B	Q5T7P3	118 aa		3.31	□□□□□ -1.88
NPC1-212	ENST00000591107	INE1	O15225	51 aa		3.01	□□□□□ -1.93
NPC1-212	ENST00000591107	MUC19	Q7Z5P9	8384 aa		2.76	□□□□□ -1.97
NPC1-212	ENST00000591107	PHGR1	C9JFL3	82 aa		2.73	□□□□□ -1.97
NPC1-212	ENST00000591107	PRM1	P04553	51 aa		2.63	□□□□□ -1.99
NPC1-212	ENST00000591107	KRTAP21-2	Q3LI59	83 aa		2.62	□□□□□ -1.99
NPC1-212	ENST00000591107	KRTAP21-1	Q3LI58	79 aa		2.01	□□□□□ -2.09
NPC1-212	ENST00000591107	MUC16	Q8WXI7	14507 aa		1.69	□□□□□ -2.14

Retrieved 78 of 20,778 RNA–protein pairs in 58.4 ms