RNA–Protein interactions for RNA: ENST00000591050.1

GCDH-215, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 3

Gene GCDH, Length 423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-215ENST00000591050 LCE3AQ5TA76 89 aa3.69□□□□□ -1.82
GCDH-215ENST00000591050 SPRR2FQ96RM1 72 aa3.68□□□□□ -1.82
GCDH-215ENST00000591050 SPRR2EP22531 72 aa3.67□□□□□ -1.82
GCDH-215ENST00000591050 SPRR2BP35325 72 aa3.67□□□□□ -1.82
GCDH-215ENST00000591050 SPRR2AP35326 72 aa3.67□□□□□ -1.82
GCDH-215ENST00000591050 LOC100996750A0A140TA64 210 aa3.63□□□□□ -1.83
GCDH-215ENST00000591050 KRTAP4-6Q9BYQ5 205 aa3.63□□□□□ -1.83
GCDH-215ENST00000591050 KRTAP2-2Q9BYT5 123 aa3.63□□□□□ -1.83
GCDH-215ENST00000591050 KRTAP2-1Q9BYU5 128 aa3.63□□□□□ -1.83
GCDH-215ENST00000591050 LCE1AQ5T7P2 110 aa3.61□□□□□ -1.83
GCDH-215ENST00000591050 KRTAP10-12P60413 245 aa3.59□□□□□ -1.83
GCDH-215ENST00000591050 PRO2289Q9P1D8 64 aa3.59□□□□□ -1.83
GCDH-215ENST00000591050 SPRR2DP22532 72 aa3.56□□□□□ -1.84
GCDH-215ENST00000591050 KRTAP12-3P60328 96 aa3.55□□□□□ -1.84
GCDH-215ENST00000591050 KRTAP10-7P60409 375 aaPredicted RBP3.51□□□□□ -1.85
GCDH-215ENST00000591050 KRTAP4-8A0A0G2JLE6 195 aa3.5□□□□□ -1.85
GCDH-215ENST00000591050 KRTAP4-8Q9BYQ9 185 aa3.5□□□□□ -1.85
GCDH-215ENST00000591050 LCE3BQ5TA77 95 aa3.48□□□□□ -1.85
GCDH-215ENST00000591050 GPR98Q8WXG9 6306 aa3.47□□□□□ -1.85
GCDH-215ENST00000591050 DSTQ03001 7570 aaKnown RBP3.45□□□□□ -1.86
GCDH-215ENST00000591050 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
GCDH-215ENST00000591050 INE1O15225 51 aa3.38□□□□□ -1.87
GCDH-215ENST00000591050 KRTAP19-5Q3LI72 72 aa3.38□□□□□ -1.87
GCDH-215ENST00000591050 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
GCDH-215ENST00000591050 LCE4AQ5TA78 99 aa3.34□□□□□ -1.87
GCDH-215ENST00000591050 KRTAP4-9Q9BYQ8 210 aa3.33□□□□□ -1.88
GCDH-215ENST00000591050 KRTAP19-7Q3SYF9 63 aa3.3□□□□□ -1.88
GCDH-215ENST00000591050 KRTAP9-4Q9BYQ2 154 aa3.26□□□□□ -1.89
GCDH-215ENST00000591050 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
GCDH-215ENST00000591050 LCE5AQ5TCM9 118 aa3.23□□□□□ -1.89
GCDH-215ENST00000591050 KRTAP9-9Q9BYP9 154 aa3.23□□□□□ -1.89
GCDH-215ENST00000591050 MT1EP04732 61 aa3.21□□□□□ -1.9
GCDH-215ENST00000591050 LCE1DQ5T752 114 aa3.21□□□□□ -1.9
GCDH-215ENST00000591050 AHNAK2Q8IVF2 5795 aa3.2□□□□□ -1.9
GCDH-215ENST00000591050 MT1LQ93083 61 aa3.2□□□□□ -1.9
GCDH-215ENST00000591050 KRTAP9-6A8MVA2 160 aa3.18□□□□□ -1.9
GCDH-215ENST00000591050 KRTAP19-3Q7Z4W3 81 aa3.18□□□□□ -1.9
GCDH-215ENST00000591050 MT4P47944 62 aa3.14□□□□□ -1.91
GCDH-215ENST00000591050 KRTAP5-10Q6L8G5 202 aa3.11□□□□□ -1.91
GCDH-215ENST00000591050 MT1GP13640 62 aa3.07□□□□□ -1.92
GCDH-215ENST00000591050 KRTAP4-7Q9BYR0 210 aa3.05□□□□□ -1.92
GCDH-215ENST00000591050 KRTAP5-4Q6L8H1 288 aa3.04□□□□□ -1.92
GCDH-215ENST00000591050 MT1MQ8N339 61 aa3.04□□□□□ -1.92
GCDH-215ENST00000591050 KRTAP5-7Q6L8G8 165 aa3.01□□□□□ -1.93
GCDH-215ENST00000591050 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
GCDH-215ENST00000591050 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
GCDH-215ENST00000591050 KRTAP4-11Q9BYQ6 195 aa2.91□□□□□ -1.94
GCDH-215ENST00000591050 KRTAP20-2Q3LI61 65 aa2.88□□□□□ -1.95
GCDH-215ENST00000591050 KRTAP4-2Q9BYR5 136 aa2.86□□□□□ -1.95
GCDH-215ENST00000591050 SYNE1Q8NF91 8797 aaKnown RBP2.83□□□□□ -1.96
GCDH-215ENST00000591050 KRTAP5-5Q701N2 237 aaPredicted RBP2.82□□□□□ -1.96
GCDH-215ENST00000591050 MT1AP04731 61 aa2.78□□□□□ -1.96
GCDH-215ENST00000591050 KRTAP12-4P60329 112 aa2.76□□□□□ -1.97
GCDH-215ENST00000591050 MT3P25713 68 aa2.75□□□□□ -1.97
GCDH-215ENST00000591050 MUC5ACP98088 5654 aa2.67□□□□□ -1.98
GCDH-215ENST00000591050 KRTAP6-1Q3LI64 71 aa2.66□□□□□ -1.98
GCDH-215ENST00000591050 OBSCNQ5VST9 7968 aa2.65□□□□□ -1.98
GCDH-215ENST00000591050 AHNAKQ09666 5890 aaKnown RBP2.65□□□□□ -1.99
GCDH-215ENST00000591050 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
GCDH-215ENST00000591050 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
GCDH-215ENST00000591050 KRTAP5-8O75690 187 aa2.61□□□□□ -1.99
GCDH-215ENST00000591050 LCE3DQ9BYE3 92 aa2.58□□□□□ -2
GCDH-215ENST00000591050 LCE3EQ5T5B0 92 aa2.56□□□□□ -2
GCDH-215ENST00000591050 KRTAP6-2Q3LI66 62 aa2.48□□□□□ -2.01
GCDH-215ENST00000591050 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
GCDH-215ENST00000591050 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
GCDH-215ENST00000591050 PRM1P04553 51 aa2.36□□□□□ -2.03
GCDH-215ENST00000591050 LCE1EQ5T753 118 aa2.18□□□□□ -2.06
GCDH-215ENST00000591050 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
GCDH-215ENST00000591050 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
GCDH-215ENST00000591050 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
GCDH-215ENST00000591050 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.91□□□□□ -2.1
GCDH-215ENST00000591050 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
GCDH-215ENST00000591050 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
GCDH-215ENST00000591050 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.15
GCDH-215ENST00000591050 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
GCDH-215ENST00000591050 KRTAP4-4Q9BYR3 166 aa1.59□□□□□ -2.15
GCDH-215ENST00000591050 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 699.9 ms