RNA–Protein interactions for RNA: ENST00000590953.5

RANBP3-219, Transcript of RAN binding protein 3, humanhuman

TSL 3

Gene RANBP3, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-219ENST00000590953 KRTAP19-3Q7Z4W3 81 aa3.6□□□□□ -1.83
RANBP3-219ENST00000590953 KRTAP12-3P60328 96 aa3.58□□□□□ -1.84
RANBP3-219ENST00000590953 KRTAP2-3P0C7H8 128 aa3.57□□□□□ -1.84
RANBP3-219ENST00000590953 LCE5AQ5TCM9 118 aa3.57□□□□□ -1.84
RANBP3-219ENST00000590953 KRTAP2-4Q9BYR9 128 aa3.57□□□□□ -1.84
RANBP3-219ENST00000590953 MT1GP13640 62 aa3.55□□□□□ -1.84
RANBP3-219ENST00000590953 PP632Q6XCG6 107 aa3.54□□□□□ -1.84
RANBP3-219ENST00000590953 MT1LQ93083 61 aa3.54□□□□□ -1.84
RANBP3-219ENST00000590953 LCE3BQ5TA77 95 aa3.49□□□□□ -1.85
RANBP3-219ENST00000590953 MT1MQ8N339 61 aa3.47□□□□□ -1.85
RANBP3-219ENST00000590953 KRTAP2-2Q9BYT5 123 aa3.47□□□□□ -1.85
RANBP3-219ENST00000590953 KRTAP2-1Q9BYU5 128 aa3.47□□□□□ -1.85
RANBP3-219ENST00000590953 KRTAP19-4Q3LI73 84 aa3.44□□□□□ -1.86
RANBP3-219ENST00000590953 PMAIP1Q13794 54 aa3.43□□□□□ -1.86
RANBP3-219ENST00000590953 KRTAP15-1Q3LI76 137 aa3.43□□□□□ -1.86
RANBP3-219ENST00000590953 DSTQ03001 7570 aaKnown RBP3.41□□□□□ -1.86
RANBP3-219ENST00000590953 PRO0628Q9UI54 55 aa3.37□□□□□ -1.87
RANBP3-219ENST00000590953 KRTAP4-7Q9BYR0 210 aa3.36□□□□□ -1.87
RANBP3-219ENST00000590953 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
RANBP3-219ENST00000590953 LCE3CQ5T5A8 94 aa3.32□□□□□ -1.88
RANBP3-219ENST00000590953 LCE4AQ5TA78 99 aa3.22□□□□□ -1.89
RANBP3-219ENST00000590953 PRAC1Q96KF2 57 aa3.22□□□□□ -1.89
RANBP3-219ENST00000590953 KRTAP5-4Q6L8H1 288 aa3.18□□□□□ -1.9
RANBP3-219ENST00000590953 KTN1-AS1Q86SY8 53 aa3.17□□□□□ -1.9
RANBP3-219ENST00000590953 KRTAP4-9Q9BYQ8 210 aa3.17□□□□□ -1.9
RANBP3-219ENST00000590953 LOC100996750A0A140TA64 210 aa3.16□□□□□ -1.9
RANBP3-219ENST00000590953 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
RANBP3-219ENST00000590953 MT4P47944 62 aa3.13□□□□□ -1.91
RANBP3-219ENST00000590953 LCE1DQ5T752 114 aa3.13□□□□□ -1.91
RANBP3-219ENST00000590953 HMCN1Q96RW7 5635 aa3.12□□□□□ -1.91
RANBP3-219ENST00000590953 KRTAP9-6A8MVA2 160 aa3.08□□□□□ -1.92
RANBP3-219ENST00000590953 KRTAP12-4P60329 112 aa3.06□□□□□ -1.92
RANBP3-219ENST00000590953 KRTAP4-6Q9BYQ5 205 aa3.05□□□□□ -1.92
RANBP3-219ENST00000590953 MT1AP04731 61 aa3.02□□□□□ -1.93
RANBP3-219ENST00000590953 SVIPQ8NHG7 77 aa3.02□□□□□ -1.93
RANBP3-219ENST00000590953 SPRR5A0A1B0GTR4 108 aa3.01□□□□□ -1.93
RANBP3-219ENST00000590953 SYNE1Q8NF91 8797 aaKnown RBP2.99□□□□□ -1.93
RANBP3-219ENST00000590953 KRTAP20-2Q3LI61 65 aa2.99□□□□□ -1.93
RANBP3-219ENST00000590953 KRTAP6-1Q3LI64 71 aa2.98□□□□□ -1.93
RANBP3-219ENST00000590953 AHNAK2Q8IVF2 5795 aa2.91□□□□□ -1.94
RANBP3-219ENST00000590953 KRTAP9-4Q9BYQ2 154 aa2.9□□□□□ -1.95
RANBP3-219ENST00000590953 KRTAP5-3Q6L8H2 238 aa2.89□□□□□ -1.95
RANBP3-219ENST00000590953 GPR98Q8WXG9 6306 aa2.88□□□□□ -1.95
RANBP3-219ENST00000590953 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
RANBP3-219ENST00000590953 KRTAP6-2Q3LI66 62 aa2.8□□□□□ -1.96
RANBP3-219ENST00000590953 KRTAP5-10Q6L8G5 202 aa2.79□□□□□ -1.96
RANBP3-219ENST00000590953 MT3P25713 68 aa2.77□□□□□ -1.97
RANBP3-219ENST00000590953 LUZP6Q538Z0 58 aa2.74□□□□□ -1.97
RANBP3-219ENST00000590953 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
RANBP3-219ENST00000590953 KRTAP5-7Q6L8G8 165 aa2.66□□□□□ -1.98
RANBP3-219ENST00000590953 KRTAP5-8O75690 187 aa2.57□□□□□ -2
RANBP3-219ENST00000590953 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
RANBP3-219ENST00000590953 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
RANBP3-219ENST00000590953 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
RANBP3-219ENST00000590953 MUC5ACP98088 5654 aa2.47□□□□□ -2.01
RANBP3-219ENST00000590953 LCE3DQ9BYE3 92 aa2.45□□□□□ -2.02
RANBP3-219ENST00000590953 KRTAP9-9Q9BYP9 154 aa2.42□□□□□ -2.02
RANBP3-219ENST00000590953 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
RANBP3-219ENST00000590953 NDUFAF8A1L188 74 aa2.38□□□□□ -2.03
RANBP3-219ENST00000590953 KRTAP4-12Q9BQ66 201 aa2.38□□□□□ -2.03
RANBP3-219ENST00000590953 LCE3EQ5T5B0 92 aa2.34□□□□□ -2.03
RANBP3-219ENST00000590953 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
RANBP3-219ENST00000590953 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
RANBP3-219ENST00000590953 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
RANBP3-219ENST00000590953 KRTAP4-2Q9BYR5 136 aa2.3□□□□□ -2.04
RANBP3-219ENST00000590953 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
RANBP3-219ENST00000590953 H3BS24 57 aa2.1□□□□□ -2.07
RANBP3-219ENST00000590953 KRTAP5-11Q6L8G4 156 aa2.06□□□□□ -2.08
RANBP3-219ENST00000590953 A0A0A0MQY5 61 aa2.04□□□□□ -2.08
RANBP3-219ENST00000590953 INE1O15225 51 aa1.99□□□□□ -2.09
RANBP3-219ENST00000590953 LCE1FQ5T754 118 aa1.97□□□□□ -2.09
RANBP3-219ENST00000590953 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
RANBP3-219ENST00000590953 PRM1P04553 51 aa1.87□□□□□ -2.11
RANBP3-219ENST00000590953 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
RANBP3-219ENST00000590953 KRTAP4-4Q9BYR3 166 aa1.75□□□□□ -2.13
RANBP3-219ENST00000590953 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
RANBP3-219ENST00000590953 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
RANBP3-219ENST00000590953 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 68 ms