RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 LCE5AQ5TCM9 118 aa7.67□□□□□ -1.18
CIRBP-229ENST00000590704 KRTAP19-3Q7Z4W3 81 aa7.64□□□□□ -1.19
CIRBP-229ENST00000590704 KRTAP25-1Q3LHN0 102 aa7.61□□□□□ -1.19
CIRBP-229ENST00000590704 LCE3BQ5TA77 95 aa7.55□□□□□ -1.2
CIRBP-229ENST00000590704 BRK1Q8WUW1 75 aa7.55□□□□□ -1.2
CIRBP-229ENST00000590704 MT1LQ93083 61 aa7.54□□□□□ -1.2
CIRBP-229ENST00000590704 MT1GP13640 62 aa7.49□□□□□ -1.21
CIRBP-229ENST00000590704 KRTAP12-3P60328 96 aa7.46□□□□□ -1.22
CIRBP-229ENST00000590704 ROMO1P60602 79 aa7.44□□□□□ -1.22
CIRBP-229ENST00000590704 MT1MQ8N339 61 aa7.41□□□□□ -1.22
CIRBP-229ENST00000590704 KRTAP23-1A1A580 65 aa7.39□□□□□ -1.23
CIRBP-229ENST00000590704 DSTQ03001 7570 aaKnown RBP7.39□□□□□ -1.23
CIRBP-229ENST00000590704 PP632Q6XCG6 107 aa7.3□□□□□ -1.24
CIRBP-229ENST00000590704 KRTAP4-3Q9BYR4 195 aa7.3□□□□□ -1.24
CIRBP-229ENST00000590704 KRTAP4-7Q9BYR0 210 aa7.26□□□□□ -1.25
CIRBP-229ENST00000590704 PMAIP1Q13794 54 aa7.11□□□□□ -1.27
CIRBP-229ENST00000590704 KRTAP15-1Q3LI76 137 aa7.11□□□□□ -1.27
CIRBP-229ENST00000590704 KRTAP4-9Q9BYQ8 210 aa7.07□□□□□ -1.28
CIRBP-229ENST00000590704 PRO0628Q9UI54 55 aa7.07□□□□□ -1.28
CIRBP-229ENST00000590704 KRTAP19-4Q3LI73 84 aa7□□□□□ -1.29
CIRBP-229ENST00000590704 GPR98Q8WXG9 6306 aa6.95□□□□□ -1.3
CIRBP-229ENST00000590704 LCE3CQ5T5A8 94 aa6.93□□□□□ -1.3
CIRBP-229ENST00000590704 KRTAP5-4Q6L8H1 288 aa6.89□□□□□ -1.31
CIRBP-229ENST00000590704 LCE1DQ5T752 114 aa6.87□□□□□ -1.31
CIRBP-229ENST00000590704 LOC100996750A0A140TA64 210 aa6.85□□□□□ -1.31
CIRBP-229ENST00000590704 LCE4AQ5TA78 99 aa6.85□□□□□ -1.31
CIRBP-229ENST00000590704 KRTAP5-5Q701N2 237 aaPredicted RBP6.83□□□□□ -1.32
CIRBP-229ENST00000590704 MT4P47944 62 aa6.78□□□□□ -1.32
CIRBP-229ENST00000590704 PRAC1Q96KF2 57 aa6.73□□□□□ -1.33
CIRBP-229ENST00000590704 KRTAP9-6A8MVA2 160 aa6.67□□□□□ -1.34
CIRBP-229ENST00000590704 HMCN1Q96RW7 5635 aa6.67□□□□□ -1.34
CIRBP-229ENST00000590704 KRTAP4-6Q9BYQ5 205 aa6.66□□□□□ -1.34
CIRBP-229ENST00000590704 KTN1-AS1Q86SY8 53 aa6.64□□□□□ -1.35
CIRBP-229ENST00000590704 SYNE1Q8NF91 8797 aaKnown RBP6.53□□□□□ -1.36
CIRBP-229ENST00000590704 KRTAP5-10Q6L8G5 202 aa6.49□□□□□ -1.37
CIRBP-229ENST00000590704 AHNAK2Q8IVF2 5795 aa6.46□□□□□ -1.37
CIRBP-229ENST00000590704 KRTAP20-2Q3LI61 65 aa6.42□□□□□ -1.38
CIRBP-229ENST00000590704 SPRR5A0A1B0GTR4 108 aa6.4□□□□□ -1.39
CIRBP-229ENST00000590704 MT1AP04731 61 aa6.4□□□□□ -1.39
CIRBP-229ENST00000590704 KRTAP6-1Q3LI64 71 aa6.39□□□□□ -1.39
CIRBP-229ENST00000590704 KRTAP12-4P60329 112 aa6.36□□□□□ -1.39
CIRBP-229ENST00000590704 SVIPQ8NHG7 77 aa6.33□□□□□ -1.4
CIRBP-229ENST00000590704 KRTAP5-3Q6L8H2 238 aa6.31□□□□□ -1.4
CIRBP-229ENST00000590704 KRTAP5-7Q6L8G8 165 aa6.28□□□□□ -1.4
CIRBP-229ENST00000590704 KRTAP9-4Q9BYQ2 154 aa6.16□□□□□ -1.42
CIRBP-229ENST00000590704 KRTAP5-2Q701N4 177 aa6.12□□□□□ -1.43
CIRBP-229ENST00000590704 KRTAP6-2Q3LI66 62 aa5.98□□□□□ -1.45
CIRBP-229ENST00000590704 KRTAP4-11Q9BYQ6 195 aa5.81□□□□□ -1.48
CIRBP-229ENST00000590704 MT3P25713 68 aa5.78□□□□□ -1.48
CIRBP-229ENST00000590704 OBSCNQ5VST9 7968 aa5.69□□□□□ -1.5
CIRBP-229ENST00000590704 KRTAP5-8O75690 187 aa5.61□□□□□ -1.51
CIRBP-229ENST00000590704 LUZP6Q538Z0 58 aa5.58□□□□□ -1.52
CIRBP-229ENST00000590704 H3BS24 57 aa5.51□□□□□ -1.53
CIRBP-229ENST00000590704 KRTAP5-1Q6L8H4 278 aa5.42□□□□□ -1.54
CIRBP-229ENST00000590704 KRTAP9-9Q9BYP9 154 aa5.4□□□□□ -1.54
CIRBP-229ENST00000590704 MUC5ACP98088 5654 aa5.4□□□□□ -1.55
CIRBP-229ENST00000590704 MUC5BQ9HC84 5762 aaPredicted RBP5.37□□□□□ -1.55
CIRBP-229ENST00000590704 AHNAKQ09666 5890 aaKnown RBP5.35□□□□□ -1.55
CIRBP-229ENST00000590704 LCE1EQ5T753 118 aa5.26□□□□□ -1.57
CIRBP-229ENST00000590704 NDUFAF8A1L188 74 aa5.05□□□□□ -1.6
CIRBP-229ENST00000590704 LCE3DQ9BYE3 92 aa5.04□□□□□ -1.6
CIRBP-229ENST00000590704 KRTAP4-2Q9BYR5 136 aa5.01□□□□□ -1.61
CIRBP-229ENST00000590704 LCE1CQ5T751 118 aa4.89□□□□□ -1.63
CIRBP-229ENST00000590704 LCE1BQ5T7P3 118 aa4.89□□□□□ -1.63
CIRBP-229ENST00000590704 A0A0A0MQY5 61 aa4.85□□□□□ -1.63
CIRBP-229ENST00000590704 LCE3EQ5T5B0 92 aa4.8□□□□□ -1.64
CIRBP-229ENST00000590704 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.54□□□□□ -1.68
CIRBP-229ENST00000590704 KRTAP5-11Q6L8G4 156 aa4.39□□□□□ -1.71
CIRBP-229ENST00000590704 KRTAP4-12Q9BQ66 201 aa4.35□□□□□ -1.71
CIRBP-229ENST00000590704 KRTAP21-2Q3LI59 83 aa4.24□□□□□ -1.73
CIRBP-229ENST00000590704 LCE1FQ5T754 118 aa4.14□□□□□ -1.75
CIRBP-229ENST00000590704 INE1O15225 51 aa4.13□□□□□ -1.75
CIRBP-229ENST00000590704 PRM1P04553 51 aa3.85□□□□□ -1.79
CIRBP-229ENST00000590704 PHGR1C9JFL3 82 aa3.82□□□□□ -1.8
CIRBP-229ENST00000590704 KRTAP4-4Q9BYR3 166 aa3.78□□□□□ -1.8
CIRBP-229ENST00000590704 MUC19Q7Z5P9 8384 aa3.47□□□□□ -1.85
CIRBP-229ENST00000590704 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
CIRBP-229ENST00000590704 MUC16Q8WXI7 14507 aa2.46□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 14.2 ms