RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 CDC42SE1Q9NRR8 79 aa7.78□□□□□ -1.16
ATG4D-212ENST00000590096 KRTAP19-3Q7Z4W3 81 aa7.76□□□□□ -1.17
ATG4D-212ENST00000590096 LCE3BQ5TA77 95 aa7.73□□□□□ -1.17
ATG4D-212ENST00000590096 LCE5AQ5TCM9 118 aa7.71□□□□□ -1.18
ATG4D-212ENST00000590096 MT1GP13640 62 aa7.63□□□□□ -1.19
ATG4D-212ENST00000590096 KRTAP12-3P60328 96 aa7.6□□□□□ -1.19
ATG4D-212ENST00000590096 PP632Q6XCG6 107 aa7.6□□□□□ -1.19
ATG4D-212ENST00000590096 MT1LQ93083 61 aa7.6□□□□□ -1.19
ATG4D-212ENST00000590096 ROMO1P60602 79 aa7.58□□□□□ -1.2
ATG4D-212ENST00000590096 DSTQ03001 7570 aaKnown RBP7.52□□□□□ -1.21
ATG4D-212ENST00000590096 KRTAP23-1A1A580 65 aa7.52□□□□□ -1.21
ATG4D-212ENST00000590096 GPR98Q8WXG9 6306 aa7.52□□□□□ -1.21
ATG4D-212ENST00000590096 MT1MQ8N339 61 aa7.49□□□□□ -1.21
ATG4D-212ENST00000590096 BRK1Q8WUW1 75 aa7.34□□□□□ -1.23
ATG4D-212ENST00000590096 KRTAP4-9Q9BYQ8 210 aa7.31□□□□□ -1.24
ATG4D-212ENST00000590096 KRTAP4-3Q9BYR4 195 aa7.28□□□□□ -1.24
ATG4D-212ENST00000590096 KRTAP15-1Q3LI76 137 aa7.23□□□□□ -1.25
ATG4D-212ENST00000590096 KRTAP4-7Q9BYR0 210 aa7.23□□□□□ -1.25
ATG4D-212ENST00000590096 KRTAP19-4Q3LI73 84 aa7.21□□□□□ -1.26
ATG4D-212ENST00000590096 LCE1DQ5T752 114 aa7.09□□□□□ -1.27
ATG4D-212ENST00000590096 HMCN1Q96RW7 5635 aa7.07□□□□□ -1.28
ATG4D-212ENST00000590096 LCE3CQ5T5A8 94 aa7.03□□□□□ -1.28
ATG4D-212ENST00000590096 LCE4AQ5TA78 99 aa7.01□□□□□ -1.29
ATG4D-212ENST00000590096 MT4P47944 62 aa6.95□□□□□ -1.3
ATG4D-212ENST00000590096 AHNAK2Q8IVF2 5795 aa6.94□□□□□ -1.3
ATG4D-212ENST00000590096 PMAIP1Q13794 54 aa6.92□□□□□ -1.3
ATG4D-212ENST00000590096 KRTAP5-4Q6L8H1 288 aa6.91□□□□□ -1.3
ATG4D-212ENST00000590096 LOC100996750A0A140TA64 210 aa6.84□□□□□ -1.31
ATG4D-212ENST00000590096 KRTAP5-5Q701N2 237 aaPredicted RBP6.81□□□□□ -1.32
ATG4D-212ENST00000590096 KRTAP5-10Q6L8G5 202 aa6.79□□□□□ -1.32
ATG4D-212ENST00000590096 KRTAP4-6Q9BYQ5 205 aa6.76□□□□□ -1.33
ATG4D-212ENST00000590096 PRO0628Q9UI54 55 aa6.69□□□□□ -1.34
ATG4D-212ENST00000590096 KRTAP12-4P60329 112 aa6.6□□□□□ -1.35
ATG4D-212ENST00000590096 KRTAP9-6A8MVA2 160 aa6.58□□□□□ -1.36
ATG4D-212ENST00000590096 KRTAP5-7Q6L8G8 165 aa6.57□□□□□ -1.36
ATG4D-212ENST00000590096 PRAC1Q96KF2 57 aa6.56□□□□□ -1.36
ATG4D-212ENST00000590096 KRTAP5-3Q6L8H2 238 aa6.55□□□□□ -1.36
ATG4D-212ENST00000590096 SYNE1Q8NF91 8797 aaKnown RBP6.55□□□□□ -1.36
ATG4D-212ENST00000590096 SPRR5A0A1B0GTR4 108 aa6.53□□□□□ -1.36
ATG4D-212ENST00000590096 KRTAP20-2Q3LI61 65 aa6.51□□□□□ -1.37
ATG4D-212ENST00000590096 MT1AP04731 61 aa6.48□□□□□ -1.37
ATG4D-212ENST00000590096 KRTAP6-1Q3LI64 71 aa6.41□□□□□ -1.38
ATG4D-212ENST00000590096 KTN1-AS1Q86SY8 53 aa6.33□□□□□ -1.4
ATG4D-212ENST00000590096 KRTAP9-4Q9BYQ2 154 aa6.22□□□□□ -1.41
ATG4D-212ENST00000590096 KRTAP5-2Q701N4 177 aa6.11□□□□□ -1.43
ATG4D-212ENST00000590096 SVIPQ8NHG7 77 aa6.07□□□□□ -1.44
ATG4D-212ENST00000590096 KRTAP6-2Q3LI66 62 aa6.06□□□□□ -1.44
ATG4D-212ENST00000590096 KRTAP4-11Q9BYQ6 195 aa5.98□□□□□ -1.45
ATG4D-212ENST00000590096 MT3P25713 68 aa5.93□□□□□ -1.46
ATG4D-212ENST00000590096 AHNAKQ09666 5890 aaKnown RBP5.82□□□□□ -1.48
ATG4D-212ENST00000590096 KRTAP5-8O75690 187 aa5.8□□□□□ -1.48
ATG4D-212ENST00000590096 MUC5BQ9HC84 5762 aaPredicted RBP5.79□□□□□ -1.48
ATG4D-212ENST00000590096 MUC5ACP98088 5654 aa5.77□□□□□ -1.49
ATG4D-212ENST00000590096 OBSCNQ5VST9 7968 aa5.74□□□□□ -1.49
ATG4D-212ENST00000590096 LUZP6Q538Z0 58 aa5.54□□□□□ -1.52
ATG4D-212ENST00000590096 KRTAP9-9Q9BYP9 154 aa5.53□□□□□ -1.52
ATG4D-212ENST00000590096 KRTAP5-1Q6L8H4 278 aa5.41□□□□□ -1.54
ATG4D-212ENST00000590096 LCE1EQ5T753 118 aa5.33□□□□□ -1.56
ATG4D-212ENST00000590096 LCE3DQ9BYE3 92 aa5.16□□□□□ -1.58
ATG4D-212ENST00000590096 LCE1BQ5T7P3 118 aa5.02□□□□□ -1.61
ATG4D-212ENST00000590096 KRTAP4-2Q9BYR5 136 aa4.99□□□□□ -1.61
ATG4D-212ENST00000590096 LCE1CQ5T751 118 aa4.95□□□□□ -1.62
ATG4D-212ENST00000590096 LCE3EQ5T5B0 92 aa4.91□□□□□ -1.62
ATG4D-212ENST00000590096 NDUFAF8A1L188 74 aa4.74□□□□□ -1.65
ATG4D-212ENST00000590096 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.54□□□□□ -1.68
ATG4D-212ENST00000590096 KRTAP5-11Q6L8G4 156 aa4.45□□□□□ -1.7
ATG4D-212ENST00000590096 KRTAP4-12Q9BQ66 201 aa4.44□□□□□ -1.7
ATG4D-212ENST00000590096 LCE1FQ5T754 118 aa4.26□□□□□ -1.73
ATG4D-212ENST00000590096 KRTAP21-2Q3LI59 83 aa4.2□□□□□ -1.74
ATG4D-212ENST00000590096 A0A0A0MQY5 61 aa3.96□□□□□ -1.78
ATG4D-212ENST00000590096 PHGR1C9JFL3 82 aa3.94□□□□□ -1.78
ATG4D-212ENST00000590096 PRM1P04553 51 aa3.89□□□□□ -1.79
ATG4D-212ENST00000590096 INE1O15225 51 aa3.88□□□□□ -1.79
ATG4D-212ENST00000590096 KRTAP4-4Q9BYR3 166 aa3.82□□□□□ -1.8
ATG4D-212ENST00000590096 MUC19Q7Z5P9 8384 aa3.56□□□□□ -1.84
ATG4D-212ENST00000590096 H3BS24 57 aa3.16□□□□□ -1.9
ATG4D-212ENST00000590096 KRTAP21-1Q3LI58 79 aa3□□□□□ -1.93
ATG4D-212ENST00000590096 MUC16Q8WXI7 14507 aa2.52□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 68.2 ms