RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 K7ERS5 55 aa6.79□□□□□ -1.32
H3F3B-209ENST00000589949 LCE5AQ5TCM9 118 aa6.77□□□□□ -1.33
H3F3B-209ENST00000589949 CAMK2N1Q7Z7J9 78 aa6.76□□□□□ -1.33
H3F3B-209ENST00000589949 PRO0628Q9UI54 55 aa6.75□□□□□ -1.33
H3F3B-209ENST00000589949 MT1EP04732 61 aa6.74□□□□□ -1.33
H3F3B-209ENST00000589949 KRTAP19-3Q7Z4W3 81 aa6.69□□□□□ -1.34
H3F3B-209ENST00000589949 DSTQ03001 7570 aaKnown RBP6.67□□□□□ -1.34
H3F3B-209ENST00000589949 KRTAP4-9Q9BYQ8 210 aa6.66□□□□□ -1.34
H3F3B-209ENST00000589949 KRTAP4-7Q9BYR0 210 aa6.66□□□□□ -1.34
H3F3B-209ENST00000589949 LCE1DQ5T752 114 aa6.62□□□□□ -1.35
H3F3B-209ENST00000589949 PMAIP1Q13794 54 aa6.58□□□□□ -1.36
H3F3B-209ENST00000589949 SVIPQ8NHG7 77 aa6.58□□□□□ -1.36
H3F3B-209ENST00000589949 KRTAP19-5Q3LI72 72 aa6.56□□□□□ -1.36
H3F3B-209ENST00000589949 GPR98Q8WXG9 6306 aa6.55□□□□□ -1.36
H3F3B-209ENST00000589949 MT1GP13640 62 aa6.5□□□□□ -1.37
H3F3B-209ENST00000589949 ROMO1P60602 79 aa6.48□□□□□ -1.37
H3F3B-209ENST00000589949 C10orf95Q9H7T3 257 aa6.47□□□□□ -1.37
H3F3B-209ENST00000589949 MT1MQ8N339 61 aa6.43□□□□□ -1.38
H3F3B-209ENST00000589949 MT1LQ93083 61 aa6.41□□□□□ -1.38
H3F3B-209ENST00000589949 PP632Q6XCG6 107 aa6.38□□□□□ -1.39
H3F3B-209ENST00000589949 KRTAP4-2Q9BYR5 136 aa6.38□□□□□ -1.39
H3F3B-209ENST00000589949 KRTAP4-3Q9BYR4 195 aa6.36□□□□□ -1.39
H3F3B-209ENST00000589949 MT4P47944 62 aa6.35□□□□□ -1.39
H3F3B-209ENST00000589949 LCE4AQ5TA78 99 aa6.34□□□□□ -1.39
H3F3B-209ENST00000589949 HMCN1Q96RW7 5635 aa6.34□□□□□ -1.4
H3F3B-209ENST00000589949 TNP1P09430 55 aa6.31□□□□□ -1.4
H3F3B-209ENST00000589949 LCE3AQ5TA76 89 aa6.31□□□□□ -1.4
H3F3B-209ENST00000589949 KRTAP25-1Q3LHN0 102 aa6.3□□□□□ -1.4
H3F3B-209ENST00000589949 KTN1-AS1Q86SY8 53 aa6.27□□□□□ -1.41
H3F3B-209ENST00000589949 KRTAP5-4Q6L8H1 288 aa6.26□□□□□ -1.41
H3F3B-209ENST00000589949 KRTAP4-11Q9BYQ6 195 aa6.2□□□□□ -1.42
H3F3B-209ENST00000589949 AHNAK2Q8IVF2 5795 aa6.17□□□□□ -1.42
H3F3B-209ENST00000589949 PRAC1Q96KF2 57 aa6.14□□□□□ -1.43
H3F3B-209ENST00000589949 KRTAP23-1A1A580 65 aa6.13□□□□□ -1.43
H3F3B-209ENST00000589949 KRTAP5-10Q6L8G5 202 aa6.12□□□□□ -1.43
H3F3B-209ENST00000589949 H3BS24 57 aa6.08□□□□□ -1.44
H3F3B-209ENST00000589949 KRTAP12-3P60328 96 aa6.03□□□□□ -1.44
H3F3B-209ENST00000589949 KRTAP5-5Q701N2 237 aaPredicted RBP5.94□□□□□ -1.46
H3F3B-209ENST00000589949 KRTAP5-3Q6L8H2 238 aa5.92□□□□□ -1.46
H3F3B-209ENST00000589949 KRTAP20-2Q3LI61 65 aa5.91□□□□□ -1.46
H3F3B-209ENST00000589949 KRTAP5-7Q6L8G8 165 aa5.88□□□□□ -1.47
H3F3B-209ENST00000589949 SPRR5A0A1B0GTR4 108 aa5.82□□□□□ -1.48
H3F3B-209ENST00000589949 KRTAP19-4Q3LI73 84 aa5.81□□□□□ -1.48
H3F3B-209ENST00000589949 KRTAP12-4P60329 112 aa5.73□□□□□ -1.49
H3F3B-209ENST00000589949 KRTAP15-1Q3LI76 137 aa5.68□□□□□ -1.5
H3F3B-209ENST00000589949 SYNE1Q8NF91 8797 aaKnown RBP5.64□□□□□ -1.51
H3F3B-209ENST00000589949 LCE3CQ5T5A8 94 aa5.54□□□□□ -1.52
H3F3B-209ENST00000589949 KRTAP6-1Q3LI64 71 aa5.45□□□□□ -1.54
H3F3B-209ENST00000589949 KRTAP5-2Q701N4 177 aa5.45□□□□□ -1.54
H3F3B-209ENST00000589949 MT1AP04731 61 aa5.42□□□□□ -1.54
H3F3B-209ENST00000589949 KRTAP9-6A8MVA2 160 aa5.33□□□□□ -1.56
H3F3B-209ENST00000589949 KRTAP5-8O75690 187 aa5.29□□□□□ -1.56
H3F3B-209ENST00000589949 KRTAP6-2Q3LI66 62 aa5.24□□□□□ -1.57
H3F3B-209ENST00000589949 MUC5ACP98088 5654 aa5.1□□□□□ -1.59
H3F3B-209ENST00000589949 OBSCNQ5VST9 7968 aa5.08□□□□□ -1.6
H3F3B-209ENST00000589949 MUC5BQ9HC84 5762 aaPredicted RBP5.08□□□□□ -1.6
H3F3B-209ENST00000589949 LUZP6Q538Z0 58 aa5.08□□□□□ -1.6
H3F3B-209ENST00000589949 AHNAKQ09666 5890 aaKnown RBP5.07□□□□□ -1.6
H3F3B-209ENST00000589949 MT3P25713 68 aa4.94□□□□□ -1.62
H3F3B-209ENST00000589949 KRTAP5-1Q6L8H4 278 aa4.94□□□□□ -1.62
H3F3B-209ENST00000589949 A0A0A0MQY5 61 aa4.86□□□□□ -1.63
H3F3B-209ENST00000589949 NDUFAF8A1L188 74 aa4.82□□□□□ -1.64
H3F3B-209ENST00000589949 LCE1EQ5T753 118 aa4.59□□□□□ -1.67
H3F3B-209ENST00000589949 LCE1BQ5T7P3 118 aa4.37□□□□□ -1.71
H3F3B-209ENST00000589949 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
H3F3B-209ENST00000589949 LCE1CQ5T751 118 aa4.27□□□□□ -1.73
H3F3B-209ENST00000589949 KRTAP5-11Q6L8G4 156 aa4.19□□□□□ -1.74
H3F3B-209ENST00000589949 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
H3F3B-209ENST00000589949 INE1O15225 51 aa4.03□□□□□ -1.76
H3F3B-209ENST00000589949 LCE3EQ5T5B0 92 aa3.94□□□□□ -1.78
H3F3B-209ENST00000589949 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
H3F3B-209ENST00000589949 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
H3F3B-209ENST00000589949 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
H3F3B-209ENST00000589949 PHGR1C9JFL3 82 aa3.54□□□□□ -1.84
H3F3B-209ENST00000589949 PRM1P04553 51 aa3.35□□□□□ -1.87
H3F3B-209ENST00000589949 MUC19Q7Z5P9 8384 aa3.12□□□□□ -1.91
H3F3B-209ENST00000589949 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
H3F3B-209ENST00000589949 MUC16Q8WXI7 14507 aa2.25□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms