RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 A8MU10 97 aa4.27□□□□□ -1.73
SDF2-208ENST00000589788 KRTAP5-9P26371 169 aa4.23□□□□□ -1.73
SDF2-208ENST00000589788 KRTAP12-1P59990 96 aa4.22□□□□□ -1.73
SDF2-208ENST00000589788 CDC42SE1Q9NRR8 79 aa4.22□□□□□ -1.73
SDF2-208ENST00000589788 KRTAP12-2P59991 146 aa4.21□□□□□ -1.73
SDF2-208ENST00000589788 SPINT4Q6UDR6 99 aa4.2□□□□□ -1.74
SDF2-208ENST00000589788 KRTAP8-1Q8IUC2 63 aa4.19□□□□□ -1.74
SDF2-208ENST00000589788 CAMK2N1Q7Z7J9 78 aa4.18□□□□□ -1.74
SDF2-208ENST00000589788 SPRR2FQ96RM1 72 aa4.17□□□□□ -1.74
SDF2-208ENST00000589788 K7ERS5 55 aa4.15□□□□□ -1.75
SDF2-208ENST00000589788 BRK1Q8WUW1 75 aa4.13□□□□□ -1.75
SDF2-208ENST00000589788 KMT2DO14686 5537 aa4.09□□□□□ -1.75
SDF2-208ENST00000589788 NEBP20929 6669 aa4.08□□□□□ -1.76
SDF2-208ENST00000589788 SPRR2EP22531 72 aa4.08□□□□□ -1.76
SDF2-208ENST00000589788 SPRR2BP35325 72 aa4.08□□□□□ -1.76
SDF2-208ENST00000589788 SPRR2AP35326 72 aa4.08□□□□□ -1.76
SDF2-208ENST00000589788 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
SDF2-208ENST00000589788 MUC12Q9UKN1 5478 aa4.06□□□□□ -1.76
SDF2-208ENST00000589788 KRTAP20-1Q3LI63 56 aa4.06□□□□□ -1.76
SDF2-208ENST00000589788 KRTAP5-1Q6L8H4 278 aa4.06□□□□□ -1.76
SDF2-208ENST00000589788 KRTAP5-4Q6L8H1 288 aa4.02□□□□□ -1.77
SDF2-208ENST00000589788 C10orf95Q9H7T3 257 aa4□□□□□ -1.77
SDF2-208ENST00000589788 MDN1Q9NU22 5596 aa3.97□□□□□ -1.77
SDF2-208ENST00000589788 KRTAP2-3P0C7H8 128 aa3.97□□□□□ -1.77
SDF2-208ENST00000589788 KRTAP4-4Q9BYR3 166 aa3.97□□□□□ -1.77
SDF2-208ENST00000589788 KRTAP2-4Q9BYR9 128 aa3.97□□□□□ -1.77
SDF2-208ENST00000589788 PRO0628Q9UI54 55 aa3.97□□□□□ -1.77
SDF2-208ENST00000589788 KRTAP9-6A8MVA2 160 aa3.96□□□□□ -1.77
SDF2-208ENST00000589788 SPRR2DP22532 72 aa3.95□□□□□ -1.78
SDF2-208ENST00000589788 ROMO1P60602 79 aa3.94□□□□□ -1.78
SDF2-208ENST00000589788 TNP1P09430 55 aa3.92□□□□□ -1.78
SDF2-208ENST00000589788 PMAIP1Q13794 54 aa3.91□□□□□ -1.78
SDF2-208ENST00000589788 KRTAP25-1Q3LHN0 102 aa3.9□□□□□ -1.79
SDF2-208ENST00000589788 KRTAP19-7Q3SYF9 63 aa3.86□□□□□ -1.79
SDF2-208ENST00000589788 KRTAP2-1Q9BYU5 128 aa3.85□□□□□ -1.79
SDF2-208ENST00000589788 MT1EP04732 61 aa3.84□□□□□ -1.79
SDF2-208ENST00000589788 KRTAP19-5Q3LI72 72 aa3.81□□□□□ -1.8
SDF2-208ENST00000589788 KRTAP19-3Q7Z4W3 81 aa3.8□□□□□ -1.8
SDF2-208ENST00000589788 LCE3AQ5TA76 89 aa3.77□□□□□ -1.81
SDF2-208ENST00000589788 PP632Q6XCG6 107 aa3.73□□□□□ -1.81
SDF2-208ENST00000589788 MT1GP13640 62 aa3.72□□□□□ -1.81
SDF2-208ENST00000589788 KTN1-AS1Q86SY8 53 aa3.7□□□□□ -1.82
SDF2-208ENST00000589788 MT1LQ93083 61 aa3.69□□□□□ -1.82
SDF2-208ENST00000589788 MT1MQ8N339 61 aa3.66□□□□□ -1.82
SDF2-208ENST00000589788 KRTAP12-3P60328 96 aa3.65□□□□□ -1.83
SDF2-208ENST00000589788 DSTQ03001 7570 aaKnown RBP3.56□□□□□ -1.84
SDF2-208ENST00000589788 KRTAP4-3Q9BYR4 195 aa3.55□□□□□ -1.84
SDF2-208ENST00000589788 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
SDF2-208ENST00000589788 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
SDF2-208ENST00000589788 SPRR5A0A1B0GTR4 108 aa3.45□□□□□ -1.86
SDF2-208ENST00000589788 LCE3DQ9BYE3 92 aa3.45□□□□□ -1.86
SDF2-208ENST00000589788 MT4P47944 62 aa3.44□□□□□ -1.86
SDF2-208ENST00000589788 LUZP6Q538Z0 58 aa3.35□□□□□ -1.87
SDF2-208ENST00000589788 KRTAP5-5Q701N2 237 aaPredicted RBP3.31□□□□□ -1.88
SDF2-208ENST00000589788 HMCN1Q96RW7 5635 aa3.28□□□□□ -1.88
SDF2-208ENST00000589788 KRTAP12-4P60329 112 aa3.26□□□□□ -1.89
SDF2-208ENST00000589788 GPR98Q8WXG9 6306 aa3.25□□□□□ -1.89
SDF2-208ENST00000589788 KRTAP20-2Q3LI61 65 aa3.22□□□□□ -1.89
SDF2-208ENST00000589788 MT1AP04731 61 aa3.15□□□□□ -1.91
SDF2-208ENST00000589788 KRTAP5-10Q6L8G5 202 aa3.14□□□□□ -1.91
SDF2-208ENST00000589788 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
SDF2-208ENST00000589788 AHNAK2Q8IVF2 5795 aa3.11□□□□□ -1.91
SDF2-208ENST00000589788 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
SDF2-208ENST00000589788 KRTAP5-7Q6L8G8 165 aa3.01□□□□□ -1.93
SDF2-208ENST00000589788 KRTAP5-8O75690 187 aa2.97□□□□□ -1.93
SDF2-208ENST00000589788 KRTAP6-2Q3LI66 62 aa2.96□□□□□ -1.93
SDF2-208ENST00000589788 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
SDF2-208ENST00000589788 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
SDF2-208ENST00000589788 MUC5ACP98088 5654 aa2.56□□□□□ -2
SDF2-208ENST00000589788 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
SDF2-208ENST00000589788 AHNAKQ09666 5890 aaKnown RBP2.51□□□□□ -2.01
SDF2-208ENST00000589788 INE1O15225 51 aa2.36□□□□□ -2.03
SDF2-208ENST00000589788 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
SDF2-208ENST00000589788 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
SDF2-208ENST00000589788 PRM1P04553 51 aa2.03□□□□□ -2.08
SDF2-208ENST00000589788 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
SDF2-208ENST00000589788 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.18
SDF2-208ENST00000589788 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 85.3 ms