RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 ROMO1P60602 79 aa4.57□□□□□ -1.68
VAT1-206ENST00000589709 MT1EP04732 61 aa4.56□□□□□ -1.68
VAT1-206ENST00000589709 DSTQ03001 7570 aaKnown RBP4.55□□□□□ -1.68
VAT1-206ENST00000589709 KRTAP19-3Q7Z4W3 81 aa4.55□□□□□ -1.68
VAT1-206ENST00000589709 GPR98Q8WXG9 6306 aa4.53□□□□□ -1.68
VAT1-206ENST00000589709 KTN1-AS1Q86SY8 53 aa4.52□□□□□ -1.69
VAT1-206ENST00000589709 MT1GP13640 62 aa4.45□□□□□ -1.7
VAT1-206ENST00000589709 KRTAP25-1Q3LHN0 102 aa4.45□□□□□ -1.7
VAT1-206ENST00000589709 KRTAP19-5Q3LI72 72 aa4.44□□□□□ -1.7
VAT1-206ENST00000589709 KRTAP4-9Q9BYQ8 210 aa4.44□□□□□ -1.7
VAT1-206ENST00000589709 C10orf95Q9H7T3 257 aa4.44□□□□□ -1.7
VAT1-206ENST00000589709 TNP1P09430 55 aa4.42□□□□□ -1.7
VAT1-206ENST00000589709 PP632Q6XCG6 107 aa4.41□□□□□ -1.7
VAT1-206ENST00000589709 SVIPQ8NHG7 77 aa4.37□□□□□ -1.71
VAT1-206ENST00000589709 LCE1DQ5T752 114 aa4.35□□□□□ -1.71
VAT1-206ENST00000589709 MT1MQ8N339 61 aa4.35□□□□□ -1.71
VAT1-206ENST00000589709 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
VAT1-206ENST00000589709 LCE4AQ5TA78 99 aa4.34□□□□□ -1.71
VAT1-206ENST00000589709 MT1LQ93083 61 aa4.34□□□□□ -1.71
VAT1-206ENST00000589709 PRAC1Q96KF2 57 aa4.31□□□□□ -1.72
VAT1-206ENST00000589709 HMCN1Q96RW7 5635 aa4.3□□□□□ -1.72
VAT1-206ENST00000589709 MT4P47944 62 aa4.26□□□□□ -1.73
VAT1-206ENST00000589709 LCE3AQ5TA76 89 aa4.26□□□□□ -1.73
VAT1-206ENST00000589709 KRTAP5-4Q6L8H1 288 aa4.24□□□□□ -1.73
VAT1-206ENST00000589709 KRTAP4-3Q9BYR4 195 aa4.22□□□□□ -1.73
VAT1-206ENST00000589709 AHNAK2Q8IVF2 5795 aa4.2□□□□□ -1.74
VAT1-206ENST00000589709 KRTAP4-6Q9BYQ5 205 aa4.15□□□□□ -1.75
VAT1-206ENST00000589709 KRTAP12-3P60328 96 aa4.12□□□□□ -1.75
VAT1-206ENST00000589709 KRTAP5-10Q6L8G5 202 aa4.11□□□□□ -1.75
VAT1-206ENST00000589709 KRTAP4-7Q9BYR0 210 aa4.09□□□□□ -1.75
VAT1-206ENST00000589709 KRTAP5-5Q701N2 237 aaPredicted RBP4.01□□□□□ -1.77
VAT1-206ENST00000589709 SPRR5A0A1B0GTR4 108 aa3.99□□□□□ -1.77
VAT1-206ENST00000589709 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
VAT1-206ENST00000589709 KRTAP5-3Q6L8H2 238 aa3.99□□□□□ -1.77
VAT1-206ENST00000589709 KRTAP5-7Q6L8G8 165 aa3.98□□□□□ -1.77
VAT1-206ENST00000589709 KRTAP19-4Q3LI73 84 aa3.96□□□□□ -1.78
VAT1-206ENST00000589709 KRTAP15-1Q3LI76 137 aa3.95□□□□□ -1.78
VAT1-206ENST00000589709 KRTAP12-4P60329 112 aa3.94□□□□□ -1.78
VAT1-206ENST00000589709 SYNE1Q8NF91 8797 aaKnown RBP3.89□□□□□ -1.79
VAT1-206ENST00000589709 LOC100996750A0A140TA64 210 aa3.88□□□□□ -1.79
VAT1-206ENST00000589709 LCE3CQ5T5A8 94 aa3.79□□□□□ -1.8
VAT1-206ENST00000589709 MT1AP04731 61 aa3.7□□□□□ -1.82
VAT1-206ENST00000589709 KRTAP5-2Q701N4 177 aa3.7□□□□□ -1.82
VAT1-206ENST00000589709 KRTAP4-11Q9BYQ6 195 aa3.68□□□□□ -1.82
VAT1-206ENST00000589709 KRTAP6-1Q3LI64 71 aa3.67□□□□□ -1.82
VAT1-206ENST00000589709 LUZP6Q538Z0 58 aa3.67□□□□□ -1.82
VAT1-206ENST00000589709 KRTAP9-4Q9BYQ2 154 aa3.59□□□□□ -1.83
VAT1-206ENST00000589709 KRTAP9-6A8MVA2 160 aa3.57□□□□□ -1.84
VAT1-206ENST00000589709 KRTAP5-8O75690 187 aa3.56□□□□□ -1.84
VAT1-206ENST00000589709 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
VAT1-206ENST00000589709 AHNAKQ09666 5890 aaKnown RBP3.52□□□□□ -1.85
VAT1-206ENST00000589709 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
VAT1-206ENST00000589709 MUC5ACP98088 5654 aa3.46□□□□□ -1.86
VAT1-206ENST00000589709 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
VAT1-206ENST00000589709 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
VAT1-206ENST00000589709 MT3P25713 68 aa3.4□□□□□ -1.87
VAT1-206ENST00000589709 KRTAP9-9Q9BYP9 154 aa3.39□□□□□ -1.87
VAT1-206ENST00000589709 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
VAT1-206ENST00000589709 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
VAT1-206ENST00000589709 A0A0A0MQY5 61 aa3.14□□□□□ -1.91
VAT1-206ENST00000589709 KRTAP4-2Q9BYR5 136 aa2.98□□□□□ -1.93
VAT1-206ENST00000589709 INE1O15225 51 aa2.97□□□□□ -1.93
VAT1-206ENST00000589709 H3BS24 57 aa2.95□□□□□ -1.94
VAT1-206ENST00000589709 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
VAT1-206ENST00000589709 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
VAT1-206ENST00000589709 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
VAT1-206ENST00000589709 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
VAT1-206ENST00000589709 KRTAP4-12Q9BQ66 201 aa2.71□□□□□ -1.98
VAT1-206ENST00000589709 KRTAP5-11Q6L8G4 156 aa2.66□□□□□ -1.98
VAT1-206ENST00000589709 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
VAT1-206ENST00000589709 LCE1FQ5T754 118 aa2.64□□□□□ -1.99
VAT1-206ENST00000589709 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
VAT1-206ENST00000589709 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
VAT1-206ENST00000589709 PRM1P04553 51 aa2.33□□□□□ -2.04
VAT1-206ENST00000589709 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
VAT1-206ENST00000589709 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
VAT1-206ENST00000589709 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
VAT1-206ENST00000589709 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 65.7 ms