RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 KRTAP19-5Q3LI72 72 aa8.35□□□□□ -1.07
R3HDM4-205ENST00000589445 LCE3BQ5TA77 95 aa8.32□□□□□ -1.08
R3HDM4-205ENST00000589445 MT1EP04732 61 aa8.31□□□□□ -1.08
R3HDM4-205ENST00000589445 BRK1Q8WUW1 75 aa8.29□□□□□ -1.08
R3HDM4-205ENST00000589445 ROMO1P60602 79 aa8.28□□□□□ -1.08
R3HDM4-205ENST00000589445 KRTAP19-3Q7Z4W3 81 aa8.12□□□□□ -1.11
R3HDM4-205ENST00000589445 KRTAP12-3P60328 96 aa8.1□□□□□ -1.11
R3HDM4-205ENST00000589445 DSTQ03001 7570 aaKnown RBP8.07□□□□□ -1.12
R3HDM4-205ENST00000589445 LCE5AQ5TCM9 118 aa8.04□□□□□ -1.12
R3HDM4-205ENST00000589445 MT1LQ93083 61 aa8.02□□□□□ -1.13
R3HDM4-205ENST00000589445 KRTAP23-1A1A580 65 aa8.01□□□□□ -1.13
R3HDM4-205ENST00000589445 KRTAP4-9Q9BYQ8 210 aa7.96□□□□□ -1.14
R3HDM4-205ENST00000589445 MT1GP13640 62 aa7.95□□□□□ -1.14
R3HDM4-205ENST00000589445 PP632Q6XCG6 107 aa7.95□□□□□ -1.14
R3HDM4-205ENST00000589445 MT1MQ8N339 61 aa7.88□□□□□ -1.15
R3HDM4-205ENST00000589445 PMAIP1Q13794 54 aa7.76□□□□□ -1.17
R3HDM4-205ENST00000589445 KRTAP15-1Q3LI76 137 aa7.72□□□□□ -1.17
R3HDM4-205ENST00000589445 KRTAP4-3Q9BYR4 195 aa7.7□□□□□ -1.18
R3HDM4-205ENST00000589445 KRTAP4-7Q9BYR0 210 aa7.68□□□□□ -1.18
R3HDM4-205ENST00000589445 LCE1DQ5T752 114 aa7.67□□□□□ -1.18
R3HDM4-205ENST00000589445 PRO0628Q9UI54 55 aa7.62□□□□□ -1.19
R3HDM4-205ENST00000589445 HMCN1Q96RW7 5635 aa7.59□□□□□ -1.19
R3HDM4-205ENST00000589445 AHNAK2Q8IVF2 5795 aa7.58□□□□□ -1.2
R3HDM4-205ENST00000589445 KRTAP5-10Q6L8G5 202 aa7.57□□□□□ -1.2
R3HDM4-205ENST00000589445 KRTAP19-4Q3LI73 84 aa7.52□□□□□ -1.21
R3HDM4-205ENST00000589445 MT4P47944 62 aa7.49□□□□□ -1.21
R3HDM4-205ENST00000589445 LCE3CQ5T5A8 94 aa7.49□□□□□ -1.21
R3HDM4-205ENST00000589445 LCE4AQ5TA78 99 aa7.43□□□□□ -1.22
R3HDM4-205ENST00000589445 KRTAP5-7Q6L8G8 165 aa7.4□□□□□ -1.22
R3HDM4-205ENST00000589445 PRAC1Q96KF2 57 aa7.4□□□□□ -1.22
R3HDM4-205ENST00000589445 LOC100996750A0A140TA64 210 aa7.25□□□□□ -1.25
R3HDM4-205ENST00000589445 SPRR5A0A1B0GTR4 108 aa7.21□□□□□ -1.26
R3HDM4-205ENST00000589445 KTN1-AS1Q86SY8 53 aa7.21□□□□□ -1.26
R3HDM4-205ENST00000589445 KRTAP5-3Q6L8H2 238 aa7.19□□□□□ -1.26
R3HDM4-205ENST00000589445 KRTAP4-6Q9BYQ5 205 aa7.15□□□□□ -1.26
R3HDM4-205ENST00000589445 KRTAP5-4Q6L8H1 288 aa7.14□□□□□ -1.27
R3HDM4-205ENST00000589445 KRTAP5-5Q701N2 237 aaPredicted RBP7.12□□□□□ -1.27
R3HDM4-205ENST00000589445 KRTAP9-6A8MVA2 160 aa7.04□□□□□ -1.28
R3HDM4-205ENST00000589445 SVIPQ8NHG7 77 aa6.96□□□□□ -1.3
R3HDM4-205ENST00000589445 KRTAP12-4P60329 112 aa6.85□□□□□ -1.31
R3HDM4-205ENST00000589445 SYNE1Q8NF91 8797 aaKnown RBP6.83□□□□□ -1.32
R3HDM4-205ENST00000589445 MT1AP04731 61 aa6.83□□□□□ -1.32
R3HDM4-205ENST00000589445 KRTAP20-2Q3LI61 65 aa6.78□□□□□ -1.32
R3HDM4-205ENST00000589445 KRTAP6-1Q3LI64 71 aa6.77□□□□□ -1.33
R3HDM4-205ENST00000589445 AHNAKQ09666 5890 aaKnown RBP6.56□□□□□ -1.36
R3HDM4-205ENST00000589445 KRTAP9-4Q9BYQ2 154 aa6.51□□□□□ -1.37
R3HDM4-205ENST00000589445 MUC5ACP98088 5654 aa6.45□□□□□ -1.38
R3HDM4-205ENST00000589445 KRTAP4-11Q9BYQ6 195 aa6.41□□□□□ -1.38
R3HDM4-205ENST00000589445 KRTAP6-2Q3LI66 62 aa6.38□□□□□ -1.39
R3HDM4-205ENST00000589445 KRTAP5-2Q701N4 177 aa6.36□□□□□ -1.39
R3HDM4-205ENST00000589445 MUC5BQ9HC84 5762 aaPredicted RBP6.33□□□□□ -1.4
R3HDM4-205ENST00000589445 KRTAP5-8O75690 187 aa6.25□□□□□ -1.41
R3HDM4-205ENST00000589445 MT3P25713 68 aa6.21□□□□□ -1.42
R3HDM4-205ENST00000589445 LUZP6Q538Z0 58 aa6.16□□□□□ -1.42
R3HDM4-205ENST00000589445 KRTAP9-9Q9BYP9 154 aa6.08□□□□□ -1.44
R3HDM4-205ENST00000589445 OBSCNQ5VST9 7968 aa5.99□□□□□ -1.45
R3HDM4-205ENST00000589445 KRTAP5-1Q6L8H4 278 aa5.6□□□□□ -1.51
R3HDM4-205ENST00000589445 LCE1EQ5T753 118 aa5.53□□□□□ -1.52
R3HDM4-205ENST00000589445 LCE3DQ9BYE3 92 aa5.51□□□□□ -1.53
R3HDM4-205ENST00000589445 NDUFAF8A1L188 74 aa5.47□□□□□ -1.53
R3HDM4-205ENST00000589445 LCE1BQ5T7P3 118 aa5.29□□□□□ -1.56
R3HDM4-205ENST00000589445 LCE3EQ5T5B0 92 aa5.26□□□□□ -1.57
R3HDM4-205ENST00000589445 KRTAP4-2Q9BYR5 136 aa5.21□□□□□ -1.58
R3HDM4-205ENST00000589445 LCE1CQ5T751 118 aa5.14□□□□□ -1.59
R3HDM4-205ENST00000589445 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.73□□□□□ -1.65
R3HDM4-205ENST00000589445 KRTAP4-12Q9BQ66 201 aa4.73□□□□□ -1.65
R3HDM4-205ENST00000589445 A0A0A0MQY5 61 aa4.68□□□□□ -1.66
R3HDM4-205ENST00000589445 H3BS24 57 aa4.64□□□□□ -1.67
R3HDM4-205ENST00000589445 KRTAP5-11Q6L8G4 156 aa4.63□□□□□ -1.67
R3HDM4-205ENST00000589445 PHGR1C9JFL3 82 aa4.48□□□□□ -1.69
R3HDM4-205ENST00000589445 LCE1FQ5T754 118 aa4.43□□□□□ -1.7
R3HDM4-205ENST00000589445 INE1O15225 51 aa4.42□□□□□ -1.7
R3HDM4-205ENST00000589445 KRTAP21-2Q3LI59 83 aa4.41□□□□□ -1.7
R3HDM4-205ENST00000589445 PRM1P04553 51 aa4.3□□□□□ -1.72
R3HDM4-205ENST00000589445 KRTAP4-4Q9BYR3 166 aa4.05□□□□□ -1.76
R3HDM4-205ENST00000589445 MUC19Q7Z5P9 8384 aa3.72□□□□□ -1.81
R3HDM4-205ENST00000589445 KRTAP21-1Q3LI58 79 aa3.41□□□□□ -1.86
R3HDM4-205ENST00000589445 MUC16Q8WXI7 14507 aa2.56□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms