RNA–Protein interactions for RNA: ENST00000589444.1

PTPN2-209, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

Gene PTPN2, Length 2,264 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-209ENST00000589444 DEFB4AO15263 64 aa2.02□□□□□ -2.09
PTPN2-209ENST00000589444 LCE3DQ9BYE3 92 aa2.01□□□□□ -2.09
PTPN2-209ENST00000589444 MUC17Q685J3 4493 aa1.99□□□□□ -2.09
PTPN2-209ENST00000589444 CLPSL2Q6UWE3 100 aa1.98□□□□□ -2.09
PTPN2-209ENST00000589444 KRTAP2-3P0C7H8 128 aa1.96□□□□□ -2.1
PTPN2-209ENST00000589444 KRTAP2-4Q9BYR9 128 aa1.96□□□□□ -2.1
PTPN2-209ENST00000589444 MDN1Q9NU22 5596 aa1.95□□□□□ -2.1
PTPN2-209ENST00000589444 A8MTW9 85 aa1.95□□□□□ -2.1
PTPN2-209ENST00000589444 TOMM7Q9P0U1 55 aa1.94□□□□□ -2.1
PTPN2-209ENST00000589444 NOP10Q9NPE3 64 aaKnown RBP1.93□□□□□ -2.1
PTPN2-209ENST00000589444 MT1HP80294 61 aa1.89□□□□□ -2.11
PTPN2-209ENST00000589444 SPINK1P00995 79 aa1.87□□□□□ -2.11
PTPN2-209ENST00000589444 KRTAP2-1Q9BYU5 128 aa1.87□□□□□ -2.11
PTPN2-209ENST00000589444 KRTAP4-1Q9BYQ7 146 aa1.86□□□□□ -2.11
PTPN2-209ENST00000589444 K7EIM0 57 aa1.85□□□□□ -2.11
PTPN2-209ENST00000589444 HTN3P15516 51 aa1.85□□□□□ -2.11
PTPN2-209ENST00000589444 KRTAP12-3P60328 96 aa1.85□□□□□ -2.11
PTPN2-209ENST00000589444 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
PTPN2-209ENST00000589444 TMEM167AQ8TBQ9 72 aa1.84□□□□□ -2.11
PTPN2-209ENST00000589444 KRTAP19-2Q3LHN2 52 aa1.83□□□□□ -2.12
PTPN2-209ENST00000589444 KRTAP5-5Q701N2 237 aaPredicted RBP1.82□□□□□ -2.12
PTPN2-209ENST00000589444 SPART-AS1P0CW21 52 aa1.8□□□□□ -2.12
PTPN2-209ENST00000589444 LCE3AQ5TA76 89 aa1.8□□□□□ -2.12
PTPN2-209ENST00000589444 FLGP20930 4061 aaPredicted RBP1.79□□□□□ -2.12
PTPN2-209ENST00000589444 KRTAP19-6Q3LI70 58 aa1.79□□□□□ -2.12
PTPN2-209ENST00000589444 DSTQ03001 7570 aaKnown RBP1.77□□□□□ -2.13
PTPN2-209ENST00000589444 M0R2T5 61 aa1.75□□□□□ -2.13
PTPN2-209ENST00000589444 RPL39P5Q59GN2 51 aa1.75□□□□□ -2.13
PTPN2-209ENST00000589444 KRTAP5-10Q6L8G5 202 aa1.74□□□□□ -2.13
PTPN2-209ENST00000589444 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
PTPN2-209ENST00000589444 M0QZ58 72 aa1.7□□□□□ -2.14
PTPN2-209ENST00000589444 SPINK6Q6UWN8 80 aa1.7□□□□□ -2.14
PTPN2-209ENST00000589444 APELAP0DMC3 54 aa1.69□□□□□ -2.14
PTPN2-209ENST00000589444 A0A096LPF7 62 aa1.68□□□□□ -2.14
PTPN2-209ENST00000589444 AHNAKQ09666 5890 aaKnown RBP1.67□□□□□ -2.14
PTPN2-209ENST00000589444 SPRR2EP22531 72 aa1.66□□□□□ -2.14
PTPN2-209ENST00000589444 SPRR2BP35325 72 aa1.66□□□□□ -2.14
PTPN2-209ENST00000589444 SPRR2AP35326 72 aa1.66□□□□□ -2.14
PTPN2-209ENST00000589444 LCE1CQ5T751 118 aa1.65□□□□□ -2.15
PTPN2-209ENST00000589444 LCE1BQ5T7P3 118 aa1.65□□□□□ -2.15
PTPN2-209ENST00000589444 H3BNG1 76 aa1.64□□□□□ -2.15
PTPN2-209ENST00000589444 RHPN1-AS1Q9BWJ2 59 aa1.64□□□□□ -2.15
PTPN2-209ENST00000589444 MT2AP02795 61 aa1.63□□□□□ -2.15
PTPN2-209ENST00000589444 MT1FP04733 61 aa1.62□□□□□ -2.15
PTPN2-209ENST00000589444 SPRR2DP22532 72 aa1.61□□□□□ -2.15
PTPN2-209ENST00000589444 DEFB1P60022 68 aa1.6□□□□□ -2.15
PTPN2-209ENST00000589444 LINC01556Q5JQF7 62 aa1.57□□□□□ -2.16
PTPN2-209ENST00000589444 SPRR2FQ96RM1 72 aa1.56□□□□□ -2.16
PTPN2-209ENST00000589444 MUC5ACP98088 5654 aa1.54□□□□□ -2.16
PTPN2-209ENST00000589444 TNP1P09430 55 aa1.54□□□□□ -2.16
PTPN2-209ENST00000589444 HTN1P15515 57 aa1.54□□□□□ -2.16
PTPN2-209ENST00000589444 C9orf92A6NGG3 77 aa1.5□□□□□ -2.17
PTPN2-209ENST00000589444 MT4P47944 62 aa1.48□□□□□ -2.17
PTPN2-209ENST00000589444 A0A096LNI7 61 aa1.45□□□□□ -2.18
PTPN2-209ENST00000589444 PRM1P04553 51 aa1.41□□□□□ -2.18
PTPN2-209ENST00000589444 KRTAP19-3Q7Z4W3 81 aa1.37□□□□□ -2.19
PTPN2-209ENST00000589444 KRTAP8-1Q8IUC2 63 aa1.36□□□□□ -2.19
PTPN2-209ENST00000589444 MT1BP07438 61 aa1.34□□□□□ -2.2
PTPN2-209ENST00000589444 MUC19Q7Z5P9 8384 aa1.28□□□□□ -2.2
PTPN2-209ENST00000589444 KRTAP20-2Q3LI61 65 aa1.25□□□□□ -2.21
PTPN2-209ENST00000589444 KRTAP19-8Q3LI54 63 aa1.22□□□□□ -2.21
PTPN2-209ENST00000589444 SYNE1Q8NF91 8797 aaKnown RBP1.21□□□□□ -2.22
PTPN2-209ENST00000589444 RPS29P62273 56 aaKnown RBP1.2□□□□□ -2.22
PTPN2-209ENST00000589444 KRTAP21-2Q3LI59 83 aa1.17□□□□□ -2.22
PTPN2-209ENST00000589444 SPRR2GQ9BYE4 73 aa1.13□□□□□ -2.23
PTPN2-209ENST00000589444 MT1XP80297 61 aa1.12□□□□□ -2.23
PTPN2-209ENST00000589444 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
PTPN2-209ENST00000589444 MT1AP04731 61 aa1.1□□□□□ -2.23
PTPN2-209ENST00000589444 KRTAP19-5Q3LI72 72 aa1.06□□□□□ -2.24
PTPN2-209ENST00000589444 KRTAP6-2Q3LI66 62 aa1.05□□□□□ -2.24
PTPN2-209ENST00000589444 PHGR1C9JFL3 82 aa1.03□□□□□ -2.24
PTPN2-209ENST00000589444 MT1EP04732 61 aa1.01□□□□□ -2.25
PTPN2-209ENST00000589444 KRTAP19-7Q3SYF9 63 aa1.01□□□□□ -2.25
PTPN2-209ENST00000589444 MT1GP13640 62 aa1□□□□□ -2.25
PTPN2-209ENST00000589444 MT1MQ8N339 61 aa1□□□□□ -2.25
PTPN2-209ENST00000589444 MT1LQ93083 61 aa0.88□□□□□ -2.27
PTPN2-209ENST00000589444 KRTAP6-1Q3LI64 71 aa0.78□□□□□ -2.28
PTPN2-209ENST00000589444 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 40.1 ms