RNA–Protein interactions for RNA: ENST00000589381.5

ERCC1-210, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-210ENST00000589381 LCE5AQ5TCM9 118 aa6.66□□□□□ -1.34
ERCC1-210ENST00000589381 LCE3BQ5TA77 95 aa6.62□□□□□ -1.35
ERCC1-210ENST00000589381 MT1GP13640 62 aa6.59□□□□□ -1.35
ERCC1-210ENST00000589381 KRTAP2-2Q9BYT5 123 aa6.59□□□□□ -1.35
ERCC1-210ENST00000589381 KRTAP2-1Q9BYU5 128 aa6.59□□□□□ -1.35
ERCC1-210ENST00000589381 KRTAP12-3P60328 96 aa6.58□□□□□ -1.36
ERCC1-210ENST00000589381 MT1LQ93083 61 aa6.58□□□□□ -1.36
ERCC1-210ENST00000589381 ROMO1P60602 79 aa6.57□□□□□ -1.36
ERCC1-210ENST00000589381 PP632Q6XCG6 107 aa6.57□□□□□ -1.36
ERCC1-210ENST00000589381 KRTAP23-1A1A580 65 aa6.51□□□□□ -1.37
ERCC1-210ENST00000589381 MT1MQ8N339 61 aa6.47□□□□□ -1.37
ERCC1-210ENST00000589381 DSTQ03001 7570 aaKnown RBP6.44□□□□□ -1.38
ERCC1-210ENST00000589381 BRK1Q8WUW1 75 aa6.38□□□□□ -1.39
ERCC1-210ENST00000589381 KRTAP4-3Q9BYR4 195 aa6.3□□□□□ -1.4
ERCC1-210ENST00000589381 KRTAP15-1Q3LI76 137 aa6.26□□□□□ -1.41
ERCC1-210ENST00000589381 KRTAP4-7Q9BYR0 210 aa6.25□□□□□ -1.41
ERCC1-210ENST00000589381 KRTAP19-4Q3LI73 84 aa6.24□□□□□ -1.41
ERCC1-210ENST00000589381 LCE3CQ5T5A8 94 aa6.09□□□□□ -1.43
ERCC1-210ENST00000589381 GPR98Q8WXG9 6306 aa6.06□□□□□ -1.44
ERCC1-210ENST00000589381 LCE4AQ5TA78 99 aa6.05□□□□□ -1.44
ERCC1-210ENST00000589381 KRTAP4-9Q9BYQ8 210 aa6.05□□□□□ -1.44
ERCC1-210ENST00000589381 PMAIP1Q13794 54 aa6.02□□□□□ -1.45
ERCC1-210ENST00000589381 KRTAP5-4Q6L8H1 288 aa5.96□□□□□ -1.46
ERCC1-210ENST00000589381 MT4P47944 62 aa5.94□□□□□ -1.46
ERCC1-210ENST00000589381 LCE1DQ5T752 114 aa5.94□□□□□ -1.46
ERCC1-210ENST00000589381 LOC100996750A0A140TA64 210 aa5.91□□□□□ -1.46
ERCC1-210ENST00000589381 KRTAP5-5Q701N2 237 aaPredicted RBP5.88□□□□□ -1.47
ERCC1-210ENST00000589381 HMCN1Q96RW7 5635 aa5.82□□□□□ -1.48
ERCC1-210ENST00000589381 PRO0628Q9UI54 55 aa5.82□□□□□ -1.48
ERCC1-210ENST00000589381 KRTAP4-6Q9BYQ5 205 aa5.78□□□□□ -1.48
ERCC1-210ENST00000589381 KRTAP12-4P60329 112 aa5.71□□□□□ -1.5
ERCC1-210ENST00000589381 KRTAP9-6A8MVA2 160 aa5.69□□□□□ -1.5
ERCC1-210ENST00000589381 PRAC1Q96KF2 57 aa5.69□□□□□ -1.5
ERCC1-210ENST00000589381 SPRR5A0A1B0GTR4 108 aa5.64□□□□□ -1.51
ERCC1-210ENST00000589381 KRTAP20-2Q3LI61 65 aa5.62□□□□□ -1.51
ERCC1-210ENST00000589381 SYNE1Q8NF91 8797 aaKnown RBP5.6□□□□□ -1.51
ERCC1-210ENST00000589381 MT1AP04731 61 aa5.6□□□□□ -1.51
ERCC1-210ENST00000589381 KRTAP6-1Q3LI64 71 aa5.54□□□□□ -1.52
ERCC1-210ENST00000589381 AHNAK2Q8IVF2 5795 aa5.51□□□□□ -1.53
ERCC1-210ENST00000589381 KTN1-AS1Q86SY8 53 aa5.5□□□□□ -1.53
ERCC1-210ENST00000589381 KRTAP5-3Q6L8H2 238 aa5.42□□□□□ -1.54
ERCC1-210ENST00000589381 KRTAP9-4Q9BYQ2 154 aa5.38□□□□□ -1.55
ERCC1-210ENST00000589381 KRTAP5-10Q6L8G5 202 aa5.34□□□□□ -1.55
ERCC1-210ENST00000589381 SVIPQ8NHG7 77 aa5.28□□□□□ -1.56
ERCC1-210ENST00000589381 KRTAP5-2Q701N4 177 aa5.27□□□□□ -1.57
ERCC1-210ENST00000589381 KRTAP6-2Q3LI66 62 aa5.24□□□□□ -1.57
ERCC1-210ENST00000589381 MT3P25713 68 aa5.13□□□□□ -1.59
ERCC1-210ENST00000589381 KRTAP5-7Q6L8G8 165 aa5.12□□□□□ -1.59
ERCC1-210ENST00000589381 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
ERCC1-210ENST00000589381 OBSCNQ5VST9 7968 aa4.88□□□□□ -1.63
ERCC1-210ENST00000589381 KRTAP5-8O75690 187 aa4.86□□□□□ -1.63
ERCC1-210ENST00000589381 LUZP6Q538Z0 58 aa4.83□□□□□ -1.64
ERCC1-210ENST00000589381 KRTAP5-1Q6L8H4 278 aa4.67□□□□□ -1.66
ERCC1-210ENST00000589381 AHNAKQ09666 5890 aaKnown RBP4.64□□□□□ -1.67
ERCC1-210ENST00000589381 LCE1EQ5T753 118 aa4.61□□□□□ -1.67
ERCC1-210ENST00000589381 MUC5ACP98088 5654 aa4.61□□□□□ -1.67
ERCC1-210ENST00000589381 KRTAP9-9Q9BYP9 154 aa4.6□□□□□ -1.67
ERCC1-210ENST00000589381 MUC5BQ9HC84 5762 aaPredicted RBP4.5□□□□□ -1.69
ERCC1-210ENST00000589381 LCE3DQ9BYE3 92 aa4.46□□□□□ -1.7
ERCC1-210ENST00000589381 LCE1BQ5T7P3 118 aa4.34□□□□□ -1.71
ERCC1-210ENST00000589381 KRTAP4-2Q9BYR5 136 aa4.31□□□□□ -1.72
ERCC1-210ENST00000589381 LCE1CQ5T751 118 aa4.28□□□□□ -1.72
ERCC1-210ENST00000589381 LCE3EQ5T5B0 92 aa4.26□□□□□ -1.73
ERCC1-210ENST00000589381 NDUFAF8A1L188 74 aa4.13□□□□□ -1.75
ERCC1-210ENST00000589381 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
ERCC1-210ENST00000589381 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.79
ERCC1-210ENST00000589381 KRTAP4-12Q9BQ66 201 aa3.81□□□□□ -1.8
ERCC1-210ENST00000589381 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
ERCC1-210ENST00000589381 H3BS24 57 aa3.66□□□□□ -1.82
ERCC1-210ENST00000589381 KRTAP21-2Q3LI59 83 aa3.63□□□□□ -1.83
ERCC1-210ENST00000589381 A0A0A0MQY5 61 aa3.46□□□□□ -1.86
ERCC1-210ENST00000589381 INE1O15225 51 aa3.38□□□□□ -1.87
ERCC1-210ENST00000589381 PRM1P04553 51 aa3.37□□□□□ -1.87
ERCC1-210ENST00000589381 PHGR1C9JFL3 82 aa3.31□□□□□ -1.88
ERCC1-210ENST00000589381 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
ERCC1-210ENST00000589381 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
ERCC1-210ENST00000589381 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
ERCC1-210ENST00000589381 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 74.6 ms